MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33826 bp
Accession: NZ_CP110120 Location: 1..33826 Organism: Escherichia coli strain 2-331 Replicon: plasmid p2-331_3
Accession: NZ_CP110120 Location: 1..33826 Organism: Escherichia coli strain 2-331 Replicon: plasmid p2-331_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OMD12_RS25395 (OMD12_25210) | 304..1422 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| OMD12_RS25400 (OMD12_25215) | 1424..2452 | + | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| OMD12_RS25405 (OMD12_25220) | 2439..4301 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| OMD12_RS25410 (OMD12_25225) | 4310..4732 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| OMD12_RS25415 (OMD12_25230) | 4716..5021 | + | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OMD12_RS25420 (OMD12_25235) | 5076..5324 | + | 249 | WP_001290044.1 | hypothetical protein | - |
| OMD12_RS25425 (OMD12_25240) | 5416..5724 | + | 309 | WP_000647577.1 | hypothetical protein | - |
| OMD12_RS25430 (OMD12_25245) | 5721..6215 | + | 495 | WP_001215681.1 | thermonuclease family protein | - |
| OMD12_RS25435 (OMD12_25250) | 6297..7559 | + | 1263 | WP_000517489.1 | AAA family ATPase | - |
| OMD12_RS25440 (OMD12_25255) | 7563..8135 | + | 573 | WP_001199073.1 | hypothetical protein | - |
| OMD12_RS25445 (OMD12_25260) | 8140..10293 | + | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| OMD12_RS25450 (OMD12_25265) | 10290..10496 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| OMD12_RS25455 (OMD12_25270) | 10512..10976 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| OMD12_RS25460 (OMD12_25275) | 11080..11736 | + | 657 | WP_000972911.1 | hypothetical protein | - |
| OMD12_RS25465 (OMD12_25280) | 11819..12208 | + | 390 | WP_223196981.1 | hypothetical protein | - |
| OMD12_RS25470 (OMD12_25285) | 12293..13117 | + | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| OMD12_RS25475 (OMD12_25290) | 13222..13881 | + | 660 | WP_000516230.1 | hypothetical protein | VF |
| OMD12_RS25480 (OMD12_25295) | 14047..14349 | + | 303 | WP_001062964.1 | hypothetical protein | - |
| OMD12_RS25485 (OMD12_25300) | 14386..14637 | + | 252 | WP_000905709.1 | hypothetical protein | - |
| OMD12_RS25490 (OMD12_25305) | 15209..15736 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| OMD12_RS25495 (OMD12_25310) | 15872..16276 | - | 405 | WP_000654313.1 | hypothetical protein | - |
| OMD12_RS25500 (OMD12_25315) | 16342..17349 | - | 1008 | WP_000243326.1 | replication initiation protein | - |
| OMD12_RS25505 (OMD12_25320) | 18893..19228 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OMD12_RS25510 (OMD12_25325) | 19225..19575 | + | 351 | WP_000127483.1 | hypothetical protein | - |
| OMD12_RS25515 (OMD12_25330) | 20214..20729 | + | 516 | WP_001025396.1 | J domain-containing protein | - |
| OMD12_RS25520 (OMD12_25335) | 20834..21376 | + | 543 | WP_001083908.1 | hypothetical protein | - |
| OMD12_RS25525 (OMD12_25340) | 21373..21624 | + | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| OMD12_RS25530 (OMD12_25345) | 21611..21838 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| OMD12_RS25535 (OMD12_25350) | 22230..22529 | + | 300 | WP_000650313.1 | hypothetical protein | - |
| OMD12_RS25540 (OMD12_25355) | 22621..22986 | + | 366 | WP_000854262.1 | hypothetical protein | - |
| OMD12_RS25545 (OMD12_25360) | 23261..23434 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| OMD12_RS25550 (OMD12_25365) | 23797..24300 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| OMD12_RS25555 (OMD12_25370) | 24304..25533 | + | 1230 | WP_000539545.1 | hypothetical protein | Relaxase |
| OMD12_RS25560 (OMD12_25375) | 25610..25903 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OMD12_RS25565 (OMD12_25380) | 25900..26115 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| OMD12_RS25570 (OMD12_25385) | 26292..26468 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| OMD12_RS25575 (OMD12_25390) | 26471..27091 | + | 621 | WP_001299949.1 | Type IV secretion system protein virB1 | VF |
| OMD12_RS25580 (OMD12_25395) | 27105..27431 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| OMD12_RS25585 (OMD12_25400) | 27450..30197 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| OMD12_RS25590 (OMD12_25405) | 30209..30925 | + | 717 | WP_000832280.1 | type IV secretion system protein | - |
| OMD12_RS25595 (OMD12_25410) | 30937..32031 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| OMD12_RS25600 (OMD12_25415) | 32546..33232 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|