MGE detailed information
MGE type: Conjugative plasmid MGE length: 72901 bp
Accession: NZ_CP110119 Location: 1..72901 Organism: Escherichia coli strain 2-331 Replicon: plasmid p2-331_2
Accession: NZ_CP110119 Location: 1..72901 Organism: Escherichia coli strain 2-331 Replicon: plasmid p2-331_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OMD12_RS24975 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| OMD12_RS24980 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| OMD12_RS24985 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| OMD12_RS24990 (3667) | 3667..5013 | + | 1347 | WP_039052405.1 | protein YagA | - |
| OMD12_RS24995 (5512) | 5512..5814 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| OMD12_RS25000 (5811) | 5811..6437 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| OMD12_RS25005 (6625) | 6625..7896 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| OMD12_RS25010 (7896) | 7896..8333 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OMD12_RS25015 (8330) | 8330..8578 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| OMD12_RS25020 (8996) | 8996..9898 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| OMD12_RS25025 (9902) | 9902..9988 | + | 87 | Protein_10 | hypothetical protein | - |
| OMD12_RS25030 (9993) | 9993..10328 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| OMD12_RS25035 (10666) | 10666..11646 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| OMD12_RS25040 (11649) | 11649..12071 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| OMD12_RS25045 (12075) | 12075..12385 | + | 311 | Protein_14 | hypothetical protein | - |
| OMD12_RS25050 (12461) | 12461..13144 | + | 684 | WP_000086127.1 | DNA methylase | - |
| OMD12_RS25055 (13145) | 13145..13366 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| OMD12_RS25060 (13296) | 13296..13814 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| OMD12_RS25065 (13859) | 13859..14629 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| OMD12_RS25070 (15047) | 15047..15472 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| OMD12_RS25075 (15519) | 15519..15941 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| OMD12_RS25080 (15938) | 15938..16129 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| OMD12_RS25085 (16407) | 16407..18074 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| OMD12_RS25090 (19241) | 19241..19315 | + | 75 | Protein_23 | single-stranded DNA-binding protein | - |
| OMD12_RS25095 (19316) | 19316..20122 | + | 807 | Protein_24 | hypothetical protein | - |
| OMD12_RS25100 (20209) | 20209..20955 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| OMD12_RS25105 (20970) | 20970..22511 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| OMD12_RS25110 (22706) | 22706..23191 | + | 486 | Protein_27 | hypothetical protein | - |
| OMD12_RS25115 (23244) | 23244..23678 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| OMD12_RS25120 (23675) | 23675..24394 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| OMD12_RS25125 (24391) | 24391..24987 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| OMD12_RS25130 (25449) | 25449..25949 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| OMD12_RS25135 (26678) | 26678..27112 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| OMD12_RS25140 (27206) | 27206..27472 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| OMD12_RS25145 (27649) | 27649..28038 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| OMD12_RS25150 (28035) | 28035..28937 | + | 903 | WP_011264057.1 | ISNCY family transposase ISRor2 | VF |
| OMD12_RS25155 (28999) | 28999..29205 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| OMD12_RS25160 (29236) | 29236..29487 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| OMD12_RS25165 (30066) | 30066..30914 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| OMD12_RS25170 (31001) | 31001..31336 | - | 336 | WP_237998272.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| OMD12_RS25175 (31570) | 31570..31902 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| OMD12_RS25180 (31913) | 31913..34612 | + | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| OMD12_RS25185 (34650) | 34650..36941 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| OMD12_RS25190 (36934) | 36934..38004 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| OMD12_RS25195 (38023) | 38023..39231 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (39411) | 39411..39468 | - | 58 | NuclAT_1 | - | - |
| - (39411) | 39411..39468 | - | 58 | NuclAT_1 | - | - |
| - (39411) | 39411..39468 | - | 58 | NuclAT_1 | - | - |
| - (39411) | 39411..39468 | - | 58 | NuclAT_1 | - | - |
| OMD12_RS25200 (39538) | 39538..40320 | - | 783 | WP_023063753.1 | protein FinQ | - |
| OMD12_RS25205 (40516) | 40516..40833 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| OMD12_RS25210 (40830) | 40830..41363 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| OMD12_RS25215 (41457) | 41457..42602 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| OMD12_RS25225 (43807) | 43807..44046 | + | 240 | Protein_50 | transcription termination factor NusG | - |
| OMD12_RS25230 (44300) | 44300..44983 | + | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| OMD12_RS25235 (45155) | 45155..45409 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| OMD12_RS25240 (46456) | 46456..47523 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| OMD12_RS25245 (47523) | 47523..47960 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| OMD12_RS25250 (47974) | 47974..49656 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| OMD12_RS25255 (49649) | 49649..50944 | + | 1296 | Protein_56 | type 4b pilus protein PilO2 | - |
| OMD12_RS25260 (50931) | 50931..51383 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| OMD12_RS25265 (51394) | 51394..52947 | + | 1554 | WP_023518854.1 | hypothetical protein | VF |
| OMD12_RS25270 (52960) | 52960..54045 | + | 1086 | WP_001208802.1 | hypothetical protein | VF |
| OMD12_RS25275 (54062) | 54062..54676 | + | 615 | WP_000908227.1 | hypothetical protein | VF |
| OMD12_RS25280 (54686) | 54686..55246 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| OMD12_RS25285 (55231) | 55231..55887 | + | 657 | WP_001401940.1 | hypothetical protein | VF |
| OMD12_RS25290 (55887) | 55887..57179 | + | 1293 | WP_001619585.1 | hypothetical protein | VF |
| OMD12_RS25295 (57176) | 57176..57424 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| OMD12_RS25300 (58945) | 58945..60099 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| OMD12_RS25305 (60250) | 60250..61074 | + | 825 | WP_023518851.1 | conjugal transfer protein TraE | - |
| OMD12_RS25310 (61160) | 61160..62362 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| OMD12_RS25315 (62422) | 62422..63006 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| OMD12_RS25320 (63401) | 63401..63517 | + | 117 | Protein_69 | IncI1-type conjugal transfer lipoprotein TraH | - |
| OMD12_RS25325 (63516) | 63516..65270 | + | 1755 | Protein_70 | DotA/TraY family protein | - |
| OMD12_RS25330 (65341) | 65341..66003 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| OMD12_RS25335 (66075) | 66075..66284 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| OMD12_RS25340 (66676) | 66676..66852 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| OMD12_RS25345 (66917) | 66917..67012 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| OMD12_RS25350 (67513) | 67513..67764 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| OMD12_RS25355 (67836) | 67836..67988 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (68040) | 68040..68100 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68040) | 68040..68100 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68040) | 68040..68100 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68040) | 68040..68100 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| OMD12_RS25360 (68309) | 68309..68683 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| OMD12_RS25365 (68836) | 68836..69993 | + | 1158 | Protein_78 | IS1380 family transposase ISEcp1 | Transposase |
| OMD12_RS25370 (70049) | 70049..70746 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| OMD12_RS25375 (70757) | 70757..71065 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| OMD12_RS25380 (71507) | 71507..71794 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| OMD12_RS25385 (71832) | 71832..71990 | - | 159 | Protein_82 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|