MGE detailed information
MGE type: Conjugative plasmid MGE length: 86272 bp
Accession: NZ_CP109986 Location: 1..86272 Organism: Klebsiella pneumoniae strain KP424 Replicon: plasmid pNDM-1-KP424
Accession: NZ_CP109986 Location: 1..86272 Organism: Klebsiella pneumoniae strain KP424 Replicon: plasmid pNDM-1-KP424
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OJ961_RS28535 (OJ961_28540) | 1274..2013 | - | 740 | Protein_1 | site-specific integrase | - |
| OJ961_RS28540 (OJ961_28545) | 2531..2647 | + | 117 | Protein_2 | IS5 family transposase IS5D | Transposase |
| OJ961_RS28545 (OJ961_28550) | 2719..3839 | + | 1121 | WP_089046468.1 | IS3 family transposase ISSen4 | Transposase |
| OJ961_RS28550 (OJ961_28555) | 3868..4614 | + | 747 | Protein_4 | IS5 family transposase IS5D | Transposase |
| OJ961_RS28555 (OJ961_28560) | 4776..6098 | + | 1323 | WP_016479957.1 | GntP family transporter | - |
| OJ961_RS28560 (OJ961_28565) | 6297..7088 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| OJ961_RS28565 (OJ961_28570) | 7078..7392 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| OJ961_RS28570 (OJ961_28575) | 7394..7699 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| OJ961_RS28575 (OJ961_28580) | 7701..7919 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| OJ961_RS28590 (OJ961_28595) | 10367..11335 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| OJ961_RS28595 (OJ961_28600) | 11396..12028 | - | 633 | WP_016479950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| OJ961_RS28600 (OJ961_28605) | 12391..13596 | + | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| OJ961_RS28605 (OJ961_28610) | 13593..14564 | + | 972 | WP_016479949.1 | ParB family protein | - |
| OJ961_RS28610 (OJ961_28615) | 14700..15971 | - | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| OJ961_RS28615 (OJ961_28620) | 15971..16393 | - | 423 | WP_015493080.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OJ961_RS28620 (OJ961_28625) | 16453..17673 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| OJ961_RS28625 (OJ961_28630) | 17897..18568 | - | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| OJ961_RS28630 (OJ961_28635) | 18927..19604 | + | 678 | WP_002211749.1 | DNA methylase | - |
| OJ961_RS28635 (OJ961_28640) | 19604..19825 | + | 222 | WP_015493077.1 | hypothetical protein | - |
| OJ961_RS28640 (OJ961_28645) | 19836..20255 | + | 420 | WP_016479994.1 | DUF1380 family protein | - |
| OJ961_RS28645 (OJ961_28650) | 20309..21088 | + | 780 | WP_015493075.1 | hypothetical protein | - |
| OJ961_RS28650 (OJ961_28655) | 21493..21999 | + | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| OJ961_RS28655 (OJ961_28660) | 22042..22233 | + | 192 | WP_015493073.1 | hypothetical protein | - |
| OJ961_RS28660 (OJ961_28665) | 22426..22680 | + | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| OJ961_RS28665 (OJ961_28670) | 22715..23032 | + | 318 | Protein_27 | hypothetical protein | - |
| OJ961_RS28670 (OJ961_28675) | 23303..23373 | - | 71 | Protein_28 | hypothetical protein | - |
| OJ961_RS28675 (OJ961_28680) | 23658..23888 | + | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| OJ961_RS28680 (OJ961_28685) | 23959..25968 | + | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| OJ961_RS28685 (OJ961_28690) | 26011..26442 | + | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| OJ961_RS28690 (OJ961_28695) | 26439..27167 | + | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| OJ961_RS28695 (OJ961_28700) | 27164..27487 | + | 324 | WP_008324183.1 | hypothetical protein | - |
| OJ961_RS28700 (OJ961_28705) | 27549..27908 | + | 360 | WP_015493069.1 | hypothetical protein | - |
| OJ961_RS28705 (OJ961_28710) | 28535..28909 | + | 375 | WP_008324180.1 | hypothetical protein | - |
| OJ961_RS28710 (OJ961_28715) | 28963..29250 | + | 288 | WP_008324178.1 | hypothetical protein | - |
| OJ961_RS28715 (OJ961_28720) | 29297..29641 | + | 345 | WP_008324177.1 | hypothetical protein | - |
| OJ961_RS28720 (OJ961_28725) | 29727..29990 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| OJ961_RS28725 (OJ961_28730) | 30033..30863 | + | 831 | WP_008324171.1 | N-6 DNA methylase | - |
| OJ961_RS28730 (OJ961_28735) | 31490..32020 | + | 531 | WP_008324170.1 | antirestriction protein | - |
| OJ961_RS28735 (OJ961_28740) | 32067..32543 | - | 477 | WP_008324168.1 | hypothetical protein | VF |
| OJ961_RS28740 (OJ961_28745) | 32975..33367 | + | 393 | WP_008324167.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| OJ961_RS28745 (OJ961_28750) | 33556..34245 | + | 690 | WP_008324166.1 | hypothetical protein | - |
| OJ961_RS28750 (OJ961_28755) | 34332..34556 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| OJ961_RS28755 (OJ961_28760) | 34614..34964 | + | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| OJ961_RS28760 (OJ961_28765) | 35115..35420 | + | 306 | WP_016479987.1 | type IV conjugative transfer system protein TraL | - |
| OJ961_RS28765 (OJ961_28770) | 35435..36001 | + | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| OJ961_RS28770 (OJ961_28775) | 35988..36731 | + | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| OJ961_RS28775 (OJ961_28780) | 36718..38112 | + | 1395 | WP_016479986.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| OJ961_RS28780 (OJ961_28785) | 38134..38673 | + | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| OJ961_RS28785 (OJ961_28790) | 38793..39017 | + | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| OJ961_RS28790 (OJ961_28795) | 39021..39206 | + | 186 | WP_008324139.1 | hypothetical protein | - |
| OJ961_RS28795 (OJ961_28800) | 39424..39591 | + | 168 | WP_223274120.1 | Clp protease | - |
| OJ961_RS28800 (OJ961_28805) | 39581..40147 | + | 567 | WP_008324135.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| OJ961_RS28805 (OJ961_28810) | 40140..42770 | + | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| OJ961_RS28810 (OJ961_28815) | 42767..43114 | + | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| OJ961_RS28815 (OJ961_28820) | 43114..43761 | + | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| OJ961_RS28820 (OJ961_28825) | 43764..44750 | + | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| OJ961_RS28825 (OJ961_28830) | 44767..45396 | + | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| OJ961_RS28830 (OJ961_28835) | 45393..47246 | + | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| OJ961_RS28835 (OJ961_28840) | 47278..47466 | + | 189 | WP_008324128.1 | conjugal transfer protein TrbE | - |
| OJ961_RS28840 (OJ961_28845) | 47497..48246 | + | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| OJ961_RS28845 (OJ961_28850) | 48263..48511 | + | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| OJ961_RS28850 (OJ961_28855) | 48501..49055 | + | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| OJ961_RS28855 (OJ961_28860) | 49048..49476 | + | 429 | WP_008324122.1 | hypothetical protein | - |
| OJ961_RS28860 (OJ961_28865) | 49463..50833 | + | 1371 | WP_016247527.1 | conjugal transfer pilus assembly protein TraH | - |
| OJ961_RS28865 (OJ961_28870) | 50833..53655 | + | 2823 | WP_008324119.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| OJ961_RS28870 (OJ961_28875) | 53677..54108 | + | 432 | WP_008324118.1 | entry exclusion protein | - |
| OJ961_RS28875 (OJ961_28880) | 54183..54521 | + | 339 | WP_032072912.1 | hypothetical protein | VF |
| OJ961_RS28880 (OJ961_28885) | 54529..54858 | + | 330 | WP_223856629.1 | hypothetical protein | - |
| OJ961_RS28885 (OJ961_28890) | 54992..57238 | + | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| OJ961_RS28890 (OJ961_28895) | 57238..62478 | + | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| OJ961_RS28895 (OJ961_28900) | 62480..63217 | + | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| OJ961_RS28900 (OJ961_28905) | 63284..64003 | + | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| OJ961_RS28905 (OJ961_28910) | 63996..64787 | + | 792 | WP_016479977.1 | DsbA family protein | - |
| OJ961_RS28910 (OJ961_28915) | 64935..65480 | + | 546 | WP_008324931.1 | Cardiolipin synthase A | VF |
| OJ961_RS28915 (OJ961_28920) | 65632..65910 | + | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| OJ961_RS28920 (OJ961_28925) | 66002..66162 | + | 161 | Protein_78 | protein CopA/IncA | - |
| OJ961_RS28925 (OJ961_28930) | 66129..66206 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| OJ961_RS28930 (OJ961_28935) | 66199..67062 | + | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| OJ961_RS28935 (OJ961_28940) | 67921..68067 | - | 147 | WP_032072915.1 | hypothetical protein | - |
| OJ961_RS28940 (OJ961_28945) | 68206..69054 | + | 849 | WP_032072916.1 | hypothetical protein | - |
| OJ961_RS28945 (OJ961_28950) | 69114..69398 | + | 285 | WP_032072917.1 | hypothetical protein | - |
| OJ961_RS28950 (OJ961_28955) | 69487..69780 | + | 294 | WP_032072918.1 | hypothetical protein | - |
| OJ961_RS28955 (OJ961_28960) | 69795..70385 | + | 591 | WP_064762226.1 | hypothetical protein | - |
| OJ961_RS28960 (OJ961_28965) | 70412..70993 | + | 582 | WP_045265539.1 | DUF2913 family protein | - |
| OJ961_RS28965 (OJ961_28970) | 71437..72000 | - | 564 | WP_155082050.1 | hypothetical protein | - |
| OJ961_RS28970 (OJ961_28975) | 72122..72664 | - | 543 | WP_077253195.1 | restriction endonuclease | - |
| OJ961_RS28975 (OJ961_28980) | 72646..73626 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| OJ961_RS28980 (OJ961_28985) | 73830..73985 | + | 156 | WP_000074143.1 | hypothetical protein | - |
| OJ961_RS28985 (OJ961_28990) | 74034..75026 | + | 993 | WP_001145102.1 | hypothetical protein | - |
| OJ961_RS28990 (OJ961_28995) | 75095..75970 | + | 876 | Protein_92 | IS5 family transposase ISKpn26 | Transposase |
| OJ961_RS28995 (OJ961_29000) | 76423..77235 | + | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| OJ961_RS29000 (OJ961_29005) | 77239..77604 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| OJ961_RS29005 (OJ961_29010) | 77609..78247 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| OJ961_RS29010 (OJ961_29015) | 78258..78815 | - | 558 | Protein_96 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| OJ961_RS29015 (OJ961_29020) | 78915..79289 | - | 375 | Protein_97 | protein-disulfide reductase DsbD family protein | - |
| OJ961_RS29020 (OJ961_29025) | 79294..79623 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| OJ961_RS29025 (OJ961_29030) | 79817..80107 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| OJ961_RS29030 (OJ961_29035) | 80163..81803 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| OJ961_RS29035 (OJ961_29040) | 81992..82174 | + | 183 | WP_016479964.1 | hypothetical protein | - |
| OJ961_RS29040 (OJ961_29045) | 82429..82548 | + | 120 | Protein_102 | IS30 family transposase | - |
| OJ961_RS29045 (OJ961_29050) | 82561..83307 | + | 747 | Protein_103 | IS3 family transposase ISEhe3 | Transposase |
| OJ961_RS29050 (OJ961_29055) | 83454..84434 | - | 981 | WP_000019405.1 | IS5 family transposase IS5D | Transposase |
| OJ961_RS29055 (OJ961_29060) | 84602..85132 | - | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | - |
| OJ961_RS29060 (OJ961_29065) | 85136..85405 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|