MGE detailed information
MGE type: Prophage MGE length: 27113 bp
Accession: NZ_CP109947 Location: 672215..699327 Organism: Pectobacterium cacticida strain CFCC10813 Replicon: chromosome
Accession: NZ_CP109947 Location: 672215..699327 Organism: Pectobacterium cacticida strain CFCC10813 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OI450_RS03130 (OI450_03130) | 667916..668911 | + | 996 | WP_264497740.1 | LysR family transcriptional regulator | - |
| OI450_RS03135 (OI450_03135) | 669140..670579 | + | 1440 | WP_264497741.1 | aspartate ammonia-lyase | - |
| OI450_RS03140 (OI450_03140) | 670632..671483 | - | 852 | WP_264497742.1 | DUF1989 domain-containing protein | - |
| OI450_RS03145 (OI450_03145) | 671483..672205 | - | 723 | WP_264497743.1 | GntR family transcriptional regulator | - |
| OI450_RS03150 (OI450_03150) | 672215..673723 | - | 1509 | WP_264497744.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OI450_RS03155 (OI450_03155) | 673747..674562 | - | 816 | WP_264497745.1 | transporter substrate-binding domain-containing protein | - |
| OI450_RS03165 (OI450_03165) | 675770..676285 | - | 516 | WP_264497746.1 | GNAT family N-acetyltransferase | - |
| OI450_RS03170 (OI450_03170) | 676287..676553 | - | 267 | WP_264497747.1 | DUF1778 domain-containing protein | - |
| OI450_RS03175 (OI450_03175) | 676904..677176 | + | 273 | WP_264497748.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OI450_RS03180 (OI450_03180) | 677209..677646 | + | 438 | WP_264497749.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OI450_RS03190 (OI450_03190) | 678508..678990 | - | 483 | WP_264497750.1 | SsrA-binding protein SmpB | - |
| OI450_RS03195 (OI450_03195) | 679145..679591 | + | 447 | WP_264497751.1 | type II toxin-antitoxin system RatA family toxin | - |
| OI450_RS03200 (OI450_03200) | 679572..679862 | + | 291 | WP_264497752.1 | RnfH family protein | - |
| OI450_RS03205 (OI450_03205) | 680092..680592 | + | 501 | WP_264497753.1 | G/U mismatch-specific DNA glycosylase | - |
| OI450_RS03210 (OI450_03210) | 680669..682498 | - | 1830 | WP_264497754.1 | RNA polymerase sigma factor RpoD | - |
| OI450_RS03215 (OI450_03215) | 682654..684408 | - | 1755 | WP_264497755.1 | DNA primase | - |
| OI450_RS03220 (OI450_03220) | 684560..684775 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| OI450_RS03225 (OI450_03225) | 685008..686021 | + | 1014 | WP_264497756.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| OI450_RS03230 (OI450_03230) | 686111..686581 | - | 471 | WP_264497757.1 | transcriptional regulator ArgR | - |
| OI450_RS03235 (OI450_03235) | 687049..687987 | + | 939 | WP_264497758.1 | malate dehydrogenase | - |
| OI450_RS03240 (OI450_03240) | 688048..688311 | - | 264 | WP_264497759.1 | helix-turn-helix transcriptional regulator | - |
| OI450_RS03245 (OI450_03245) | 688499..688885 | + | 387 | WP_264497760.1 | DNA-binding protein | - |
| OI450_RS03250 (OI450_03250) | 689133..689507 | + | 375 | WP_264497761.1 | DNA-binding protein | - |
| OI450_RS03255 (OI450_03255) | 689583..690554 | - | 972 | WP_264497762.1 | octaprenyl diphosphate synthase | - |
| OI450_RS03260 (OI450_03260) | 690811..691122 | + | 312 | WP_010283026.1 | 50S ribosomal protein L21 | - |
| OI450_RS03265 (OI450_03265) | 691142..691399 | + | 258 | WP_264497763.1 | 50S ribosomal protein L27 | - |
| OI450_RS03270 (OI450_03270) | 691488..692450 | + | 963 | WP_264497764.1 | DMT family transporter | - |
| OI450_RS03275 (OI450_03275) | 692708..693880 | + | 1173 | WP_264497765.1 | Obg family GTPase CgtA | - |
| OI450_RS03280 (OI450_03280) | 693948..695381 | - | 1434 | WP_264498861.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| OI450_RS03285 (OI450_03285) | 695648..696124 | + | 477 | WP_264497766.1 | transcription elongation factor GreA | - |
| OI450_RS03290 (OI450_03290) | 696252..696545 | - | 294 | WP_264497767.1 | ribosome assembly RNA-binding protein YhbY | - |
| OI450_RS03295 (OI450_03295) | 696689..697318 | + | 630 | WP_264497768.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| OI450_RS03300 (OI450_03300) | 697366..699327 | + | 1962 | WP_264497769.1 | ATP-dependent zinc metalloprotease FtsH | - |
| OI450_RS03305 (OI450_03305) | 699454..700299 | + | 846 | WP_264497770.1 | dihydropteroate synthase | - |
| OI450_RS03310 (OI450_03310) | 700296..701633 | + | 1338 | WP_264497771.1 | phosphoglucosamine mutase | - |
| OI450_RS03315 (OI450_03315) | 701882..702214 | + | 333 | WP_264497772.1 | preprotein translocase subunit SecG | - |
| OI450_RS03330 (OI450_03330) | 703136..703588 | + | 453 | WP_264497773.1 | ribosome maturation factor RimP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|