MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74548 bp
Accession: NZ_CP109940 Location: 904895..979442 Organism: Streptococcus suis strain ID34572 Replicon: chromosome
Accession: NZ_CP109940 Location: 904895..979442 Organism: Streptococcus suis strain ID34572 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM49_RS04505 (OHM49_04505) | 900573..901280 | - | 708 | WP_014638281.1 | ABC transporter ATP-binding protein | - |
| OHM49_RS04510 (OHM49_04510) | 901273..901647 | - | 375 | WP_014638280.1 | GntR family transcriptional regulator | - |
| OHM49_RS04515 (OHM49_04515) | 901801..904911 | + | 3111 | WP_024395107.1 | DNA polymerase III subunit alpha | - |
| OHM49_RS04520 (OHM49_04520) | 904996..906006 | + | 1011 | WP_024395108.1 | 6-phosphofructokinase | - |
| OHM49_RS04525 (OHM49_04525) | 906072..907577 | + | 1506 | WP_024385559.1 | pyruvate kinase | - |
| OHM49_RS04530 (OHM49_04530) | 907739..910921 | + | 3183 | WP_024395109.1 | IgM protease | VF |
| OHM49_RS04535 (OHM49_04535) | 911246..912355 | - | 1110 | WP_024395110.1 | FAD-binding oxidoreductase | - |
| OHM49_RS04540 (OHM49_04540) | 912440..913057 | + | 618 | WP_011922094.1 | GDSL-type esterase/lipase family protein | - |
| OHM49_RS04545 (OHM49_04545) | 913100..913642 | + | 543 | WP_014736040.1 | signal peptidase I | - |
| OHM49_RS04550 (OHM49_04550) | 913691..914947 | - | 1257 | WP_264485020.1 | ISL3 family transposase IS1193D | Transposase |
| OHM49_RS04555 (OHM49_04555) | 915254..917065 | + | 1812 | WP_024381447.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| OHM49_RS04560 (OHM49_04560) | 917408..918571 | - | 1164 | Protein_865 | IS30 family transposase | - |
| OHM49_RS04565 (OHM49_04565) | 918771..919145 | + | 375 | WP_043032857.1 | DUF1149 family protein | - |
| OHM49_RS04570 (OHM49_04570) | 919147..919998 | + | 852 | WP_024394325.1 | DegV family protein | - |
| OHM49_RS04575 (OHM49_04575) | 920007..920774 | + | 768 | WP_024394324.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| OHM49_RS04580 (OHM49_04580) | 920771..921982 | + | 1212 | WP_024394323.1 | CCA tRNA nucleotidyltransferase | - |
| OHM49_RS04585 (OHM49_04585) | 921975..923843 | + | 1869 | WP_024394322.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| OHM49_RS04590 (OHM49_04590) | 923844..924179 | + | 336 | WP_024394321.1 | hypothetical protein | - |
| OHM49_RS04595 (OHM49_04595) | 924275..925234 | + | 960 | WP_024394320.1 | ROK family glucokinase | - |
| OHM49_RS04600 (OHM49_04600) | 925360..925638 | + | 279 | WP_024394319.1 | hypothetical protein | - |
| OHM49_RS04605 (OHM49_04605) | 925650..925952 | + | 303 | WP_024394318.1 | hypothetical protein | - |
| OHM49_RS04610 (OHM49_04610) | 926005..926844 | + | 840 | WP_024394317.1 | thymidylate synthase | - |
| OHM49_RS04615 (OHM49_04615) | 927020..927532 | + | 513 | WP_263928776.1 | dihydrofolate reductase | - |
| OHM49_RS04620 (OHM49_04620) | 927730..928956 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| OHM49_RS04625 (OHM49_04625) | 929012..929599 | + | 588 | WP_014638915.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| OHM49_RS04630 (OHM49_04630) | 929622..930035 | + | 414 | WP_024394314.1 | nucleoside-diphosphate kinase | - |
| OHM49_RS04635 (OHM49_04635) | 930131..931963 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| OHM49_RS04640 (OHM49_04640) | 932013..932195 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| OHM49_RS04645 (OHM49_04645) | 932330..933637 | + | 1308 | WP_002934980.1 | excalibur calcium-binding domain-containing protein | - |
| OHM49_RS04650 (OHM49_04650) | 933699..933923 | + | 225 | WP_002934981.1 | hypothetical protein | - |
| OHM49_RS04655 (OHM49_04655) | 934022..934603 | + | 582 | WP_002934983.1 | thymidine kinase | - |
| OHM49_RS04660 (OHM49_04660) | 934884..935963 | + | 1080 | WP_002934984.1 | peptide chain release factor 1 | - |
| OHM49_RS04665 (OHM49_04665) | 935963..936796 | + | 834 | WP_002934985.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| OHM49_RS04670 (OHM49_04670) | 936783..937391 | + | 609 | WP_009909811.1 | L-threonylcarbamoyladenylate synthase | - |
| OHM49_RS04675 (OHM49_04675) | 937388..937819 | + | 432 | WP_009909813.1 | GNAT family N-acetyltransferase | - |
| OHM49_RS04680 (OHM49_04680) | 937843..939102 | + | 1260 | WP_002934988.1 | serine hydroxymethyltransferase | - |
| OHM49_RS04685 (OHM49_04685) | 939102..940076 | + | 975 | WP_002934989.1 | nucleoid-associated protein | - |
| OHM49_RS04690 (OHM49_04690) | 940077..940676 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
| OHM49_RS04695 (OHM49_04695) | 940777..941535 | + | 759 | WP_002934991.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| OHM49_RS04700 (OHM49_04700) | 941552..942304 | + | 753 | WP_002934992.1 | DUF6287 domain-containing protein | - |
| OHM49_RS04705 (OHM49_04705) | 942301..942633 | + | 333 | WP_002934993.1 | HIRAN domain-containing protein | - |
| OHM49_RS04710 (OHM49_04710) | 942654..943511 | - | 858 | WP_074390708.1 | hypothetical protein | - |
| OHM49_RS04715 (OHM49_04715) | 943629..944417 | - | 789 | WP_002934995.1 | hypothetical protein | - |
| OHM49_RS04720 (OHM49_04720) | 944618..946315 | + | 1698 | WP_024394313.1 | AAA family ATPase | - |
| OHM49_RS04725 (OHM49_04725) | 946312..947361 | + | 1050 | WP_002934997.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| OHM49_RS04730 (OHM49_04730) | 947523..949073 | - | 1551 | WP_002934999.1 | glutamine-hydrolyzing GMP synthase | - |
| OHM49_RS04735 (OHM49_04735) | 949349..950047 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| OHM49_RS04740 (OHM49_04740) | 950150..950482 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| OHM49_RS04745 (OHM49_04745) | 950495..952069 | + | 1575 | WP_002935002.1 | signal recognition particle protein | - |
| OHM49_RS04750 (OHM49_04750) | 952263..952931 | + | 669 | WP_002935003.1 | SatD family protein | - |
| OHM49_RS04755 (OHM49_04755) | 952935..953675 | + | 741 | WP_009909823.1 | DUF3307 domain-containing protein | - |
| OHM49_RS04760 (OHM49_04760) | 953741..954262 | + | 522 | WP_002935005.1 | AAA family ATPase | - |
| OHM49_RS04765 (OHM49_04765) | 954429..955499 | + | 1071 | WP_002935006.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| OHM49_RS04770 (OHM49_04770) | 955569..957077 | - | 1509 | WP_013730362.1 | Phosphomannomutase/phosphoglucomutase | VF |
| OHM49_RS04775 (OHM49_04775) | 957153..958094 | - | 942 | WP_002935009.1 | sensor histidine kinase | - |
| OHM49_RS04780 (OHM49_04780) | 958091..958756 | - | 666 | WP_009909826.1 | Response regulator protein GraR | VF |
| OHM49_RS04785 (OHM49_04785) | 958795..959052 | - | 258 | WP_002935012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OHM49_RS04790 (OHM49_04790) | 959042..959281 | - | 240 | WP_002935014.1 | DUF6290 family protein | Antitoxin Detail |
| OHM49_RS04795 (OHM49_04795) | 959373..961343 | - | 1971 | WP_013730363.1 | FtsX-like permease family protein | - |
| OHM49_RS04800 (OHM49_04800) | 961344..962096 | - | 753 | WP_172092511.1 | ABC transporter ATP-binding protein YxdL | VF |
| OHM49_RS04805 (OHM49_04805) | 962232..962966 | - | 735 | WP_011922410.1 | ABC transporter permease | - |
| OHM49_RS04810 (OHM49_04810) | 962968..963714 | - | 747 | WP_011922411.1 | ABC transporter permease | - |
| OHM49_RS04815 (OHM49_04815) | 963716..964618 | - | 903 | WP_011922412.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| OHM49_RS04820 (OHM49_04820) | 964639..965016 | - | 378 | WP_011922413.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| OHM49_RS04825 (OHM49_04825) | 965029..965169 | - | 141 | WP_012775106.1 | hypothetical protein | - |
| OHM49_RS04830 (OHM49_04830) | 965309..966475 | - | 1167 | WP_024394863.1 | ATP-grasp domain-containing protein | - |
| OHM49_RS04835 (OHM49_04835) | 966493..967218 | - | 726 | WP_024394864.1 | alpha/beta hydrolase-fold protein | - |
| OHM49_RS04840 (OHM49_04840) | 967249..968076 | - | 828 | WP_011922416.1 | alpha/beta hydrolase | - |
| OHM49_RS04845 (OHM49_04845) | 968190..969194 | - | 1005 | WP_024394865.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| OHM49_RS04850 (OHM49_04850) | 969259..970094 | - | 836 | Protein_923 | AraC family transcriptional regulator | - |
| OHM49_RS04855 (OHM49_04855) | 970171..971505 | - | 1335 | WP_263928775.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| OHM49_RS04860 (OHM49_04860) | 971701..972450 | - | 750 | WP_263928774.1 | HAD family hydrolase | - |
| OHM49_RS04865 (OHM49_04865) | 972635..973834 | - | 1200 | WP_014636929.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OHM49_RS04870 (OHM49_04870) | 973857..974084 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| OHM49_RS04875 (OHM49_04875) | 974363..974587 | - | 225 | WP_014636930.1 | helix-turn-helix transcriptional regulator | - |
| OHM49_RS04880 (OHM49_04880) | 974769..976634 | - | 1866 | WP_014636931.1 | SAG1250 family conjugative relaxase | - |
| OHM49_RS04885 (OHM49_04885) | 976621..976986 | - | 366 | WP_014636932.1 | MobC family plasmid mobilization relaxosome protein | - |
| OHM49_RS04890 (OHM49_04890) | 976993..977355 | - | 363 | WP_014636933.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| OHM49_RS04895 (OHM49_04895) | 977672..980215 | - | 2544 | WP_000601012.1 | AAA family ATPase | - |
| OHM49_RS04900 (OHM49_04900) | 980216..980983 | - | 768 | WP_263928773.1 | type II toxin-antitoxin system toxin PezT | - |
| OHM49_RS04905 (OHM49_04905) | 980983..981459 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | - |
| OHM49_RS04910 (OHM49_04910) | 981529..981819 | - | 291 | WP_263928772.1 | hypothetical protein | - |
| OHM49_RS04915 (OHM49_04915) | 981869..982258 | - | 390 | WP_000048066.1 | DUF5945 family protein | - |
| OHM49_RS04920 (OHM49_04920) | 982255..982482 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| OHM49_RS04925 (OHM49_04925) | 982510..983610 | - | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|