MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103800 bp
Accession: NZ_CP109939 Location: 157147..260946 Organism: Streptococcus suis strain ID36054 Replicon: chromosome
Accession: NZ_CP109939 Location: 157147..260946 Organism: Streptococcus suis strain ID36054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM47_RS00925 (OHM47_00925) | 152597..152968 | + | 372 | WP_002940041.1 | MerR family transcriptional regulator | - |
| OHM47_RS00930 (OHM47_00930) | 152997..154343 | + | 1347 | WP_011921751.1 | type I glutamate--ammonia ligase | - |
| OHM47_RS00935 (OHM47_00935) | 154617..156296 | - | 1680 | WP_002938522.1 | ribonuclease J | - |
| OHM47_RS00940 (OHM47_00940) | 156300..156530 | - | 231 | WP_002938523.1 | DNA-dependent RNA polymerase subunit epsilon | - |
| OHM47_RS00945 (OHM47_00945) | 157147..158310 | - | 1164 | Protein_152 | IS30 family transposase | - |
| OHM47_RS00950 (OHM47_00950) | 158508..159149 | + | 642 | WP_024394531.1 | amino acid ABC transporter permease | - |
| OHM47_RS00955 (OHM47_00955) | 159159..159791 | + | 633 | WP_009909533.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| OHM47_RS00960 (OHM47_00960) | 159818..160648 | + | 831 | WP_024381444.1 | amino acid ABC transporter substrate-binding protein | - |
| OHM47_RS00965 (OHM47_00965) | 161180..162343 | - | 1164 | WP_011921673.1 | IS110 family transposase ISAzo28 | Transposase |
| OHM47_RS00970 (OHM47_00970) | 162894..163178 | + | 285 | Protein_157 | ISL3 family transposase | - |
| OHM47_RS00975 (OHM47_00975) | 163705..164343 | - | 639 | WP_024394530.1 | MBL fold metallo-hydrolase | - |
| OHM47_RS00980 (OHM47_00980) | 164460..166919 | + | 2460 | WP_225533321.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| OHM47_RS00985 (OHM47_00985) | 167083..168159 | + | 1077 | WP_024394528.1 | glutamate 5-kinase | - |
| OHM47_RS00990 (OHM47_00990) | 168224..169462 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| OHM47_RS00995 (OHM47_00995) | 169472..170257 | + | 786 | WP_024394527.1 | pyrroline-5-carboxylate reductase | - |
| OHM47_RS01000 (OHM47_01000) | 170280..170684 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| OHM47_RS01005 (OHM47_01005) | 170811..171662 | + | 852 | WP_014636868.1 | DegV family protein | - |
| OHM47_RS01010 (OHM47_01010) | 171761..173020 | - | 1260 | WP_013730273.1 | PLP-dependent aminotransferase family protein | - |
| OHM47_RS01015 (OHM47_01015) | 173143..173877 | + | 735 | WP_024381470.1 | peroxide stress protein YaaA | - |
| OHM47_RS01020 (OHM47_01020) | 174007..175446 | + | 1440 | WP_013730275.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU | VF |
| OHM47_RS01025 (OHM47_01025) | 175462..176151 | + | 690 | WP_013730276.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| OHM47_RS01030 (OHM47_01030) | 176161..176847 | + | 687 | WP_013730277.1 | Tyrosine-protein kinase CpsD | VF |
| OHM47_RS01035 (OHM47_01035) | 176886..177617 | + | 732 | WP_013730278.1 | Tyrosine-protein phosphatase CpsB | VF |
| OHM47_RS01040 (OHM47_01040) | 177647..179473 | + | 1827 | WP_024390822.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| OHM47_RS01045 (OHM47_01045) | 179918..180616 | + | 699 | WP_014636873.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| OHM47_RS01050 (OHM47_01050) | 180626..181846 | + | 1221 | WP_024390820.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| OHM47_RS01055 (OHM47_01055) | 181839..182669 | + | 831 | WP_024390819.1 | UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase | VF |
| OHM47_RS01060 (OHM47_01060) | 182746..183639 | + | 894 | WP_024390818.1 | beta-1,6-N-acetylglucosaminyltransferase | - |
| OHM47_RS01065 (OHM47_01065) | 183644..184234 | + | 591 | WP_044675422.1 | GNAT family N-acetyltransferase | - |
| OHM47_RS01070 (OHM47_01070) | 184231..185388 | + | 1158 | WP_044685262.1 | hypothetical protein | - |
| OHM47_RS01075 (OHM47_01075) | 185385..186287 | + | 903 | WP_161944493.1 | glycosyltransferase family A protein | - |
| OHM47_RS01080 (OHM47_01080) | 186308..187699 | + | 1392 | WP_161945825.1 | oligosaccharide flippase family protein | - |
| OHM47_RS01085 (OHM47_01085) | 187871..189376 | + | 1506 | WP_044675484.1 | UDP-glucose 6-dehydrogenase | VF |
| OHM47_RS01090 (OHM47_01090) | 189488..190714 | - | 1227 | WP_248042381.1 | ISL3 family transposase IS1193D | Transposase |
| OHM47_RS01095 (OHM47_01095) | 190961..191881 | - | 921 | WP_044675715.1 | IS66 family transposase ISEbi1 | Transposase |
| OHM47_RS01100 (OHM47_01100) | 191835..192035 | - | 201 | WP_013730290.1 | IS66 family transposase ISBthe6 | Transposase |
| OHM47_RS01105 (OHM47_01105) | 192108..192245 | - | 138 | Protein_184 | IS110 family transposase | - |
| OHM47_RS01110 (OHM47_01110) | 192324..192509 | + | 186 | WP_013730291.1 | hypothetical protein | - |
| OHM47_RS01115 (OHM47_01115) | 192541..193437 | - | 897 | WP_013730292.1 | Tyrosine recombinase XerC | VF |
| OHM47_RS01120 (OHM47_01120) | 193534..194886 | + | 1353 | WP_225533320.1 | ATP-binding protein | - |
| OHM47_RS01125 (OHM47_01125) | 194905..195813 | + | 909 | WP_225533317.1 | tetratricopeptide repeat protein | - |
| OHM47_RS01130 (OHM47_01130) | 195797..197038 | - | 1242 | WP_014636889.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| OHM47_RS01135 (OHM47_01135) | 197252..198532 | + | 1281 | WP_014636887.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| OHM47_RS01140 (OHM47_01140) | 198541..199032 | + | 492 | WP_024393608.1 | shikimate kinase | - |
| OHM47_RS01145 (OHM47_01145) | 199023..199850 | + | 828 | WP_024381706.1 | prephenate dehydratase | - |
| OHM47_RS01150 (OHM47_01150) | 199862..201184 | + | 1323 | WP_013730298.1 | LCP family protein | - |
| OHM47_RS01155 (OHM47_01155) | 201251..202612 | + | 1362 | WP_024394786.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| OHM47_RS01160 (OHM47_01160) | 202823..202963 | + | 141 | WP_002935125.1 | hypothetical protein | - |
| OHM47_RS01165 (OHM47_01165) | 202960..203778 | + | 819 | WP_263925382.1 | replication initiator protein A | - |
| OHM47_RS01170 (OHM47_01170) | 203927..205282 | + | 1356 | WP_170241784.1 | DNA (cytosine-5-)-methyltransferase | - |
| OHM47_RS01175 (OHM47_01175) | 205266..205694 | + | 429 | WP_002935122.1 | hypothetical protein | - |
| OHM47_RS01180 (OHM47_01180) | 205705..206088 | + | 384 | WP_002935121.1 | hypothetical protein | - |
| OHM47_RS01185 (OHM47_01185) | 206097..206330 | + | 234 | WP_002935120.1 | hypothetical protein | - |
| OHM47_RS01190 (OHM47_01190) | 206333..206917 | + | 585 | WP_263925387.1 | CPBP family intramembrane metalloprotease | - |
| OHM47_RS01195 (OHM47_01195) | 206995..207483 | + | 489 | WP_014636953.1 | hypothetical protein | - |
| OHM47_RS01200 (OHM47_01200) | 207483..209300 | + | 1818 | WP_263925386.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OHM47_RS01205 (OHM47_01205) | 209318..209560 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| OHM47_RS01210 (OHM47_01210) | 209579..210433 | + | 855 | WP_002935114.1 | conjugal transfer protein TrbL | - |
| OHM47_RS01215 (OHM47_01215) | 210495..210848 | + | 354 | WP_002935113.1 | PrgI family protein | - |
| OHM47_RS01220 (OHM47_01220) | 210805..213156 | + | 2352 | WP_029750030.1 | ATPase AAA | - |
| OHM47_RS01225 (OHM47_01225) | 213158..215959 | + | 2802 | WP_264495594.1 | phage tail tip lysozyme | - |
| OHM47_RS01230 (OHM47_01230) | 216021..216866 | - | 846 | WP_024394846.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| OHM47_RS01235 (OHM47_01235) | 216863..217453 | - | 591 | WP_002935109.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| OHM47_RS01240 (OHM47_01240) | 217736..217897 | + | 162 | WP_002935108.1 | agglutinin receptor | - |
| OHM47_RS01245 (OHM47_01245) | 218085..219401 | + | 1317 | WP_002935107.1 | hypothetical protein | VF |
| OHM47_RS01250 (OHM47_01250) | 219430..219702 | + | 273 | WP_002935103.1 | DUF3884 family protein | - |
| OHM47_RS01255 (OHM47_01255) | 219791..219982 | + | 192 | WP_002935101.1 | hypothetical protein | - |
| OHM47_RS01260 (OHM47_01260) | 220185..221840 | + | 1656 | WP_249547177.1 | peptide cleavage/export ABC transporter | - |
| OHM47_RS01265 (OHM47_01265) | 221944..222948 | - | 1005 | WP_002935211.1 | IS5 family transposase ISSth7 | Transposase |
| OHM47_RS01270 (OHM47_01270) | 223028..223531 | + | 504 | WP_263925393.1 | Lactococcin-G-processing and transport ATP-binding protein LagD | VF |
| OHM47_RS01275 (OHM47_01275) | 223553..223708 | + | 156 | WP_000794567.1 | hypothetical protein | - |
| OHM47_RS01280 (OHM47_01280) | 224168..225037 | + | 870 | WP_226313481.1 | GHKL domain-containing protein | - |
| OHM47_RS01285 (OHM47_01285) | 225052..225801 | + | 750 | WP_024394858.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| OHM47_RS01290 (OHM47_01290) | 226379..227014 | + | 636 | WP_024394859.1 | hypothetical protein | - |
| OHM47_RS01295 (OHM47_01295) | 227283..232178 | + | 4896 | WP_264495595.1 | hypothetical protein | VF |
| OHM47_RS01300 (OHM47_01300) | 232179..232370 | + | 192 | WP_001068448.1 | calcium-binding protein | - |
| OHM47_RS01305 (OHM47_01305) | 232354..232905 | + | 552 | WP_264495596.1 | hypothetical protein | - |
| OHM47_RS01310 (OHM47_01310) | 232954..239778 | + | 6825 | WP_264495597.1 | SNF2-related protein | - |
| OHM47_RS01315 (OHM47_01315) | 239849..240148 | + | 300 | WP_002935086.1 | DUF5962 family protein | - |
| OHM47_RS01320 (OHM47_01320) | 240162..240452 | + | 291 | WP_248041952.1 | DUF5966 family protein | - |
| OHM47_RS01325 (OHM47_01325) | 240548..241191 | + | 644 | Protein_228 | peptidylprolyl isomerase | - |
| OHM47_RS01330 (OHM47_01330) | 241230..242306 | + | 1077 | WP_238711478.1 | toprim domain-containing protein | - |
| OHM47_RS01335 (OHM47_01335) | 242360..242587 | + | 228 | WP_000110922.1 | DUF5965 family protein | - |
| OHM47_RS01340 (OHM47_01340) | 242584..242973 | + | 390 | WP_000048066.1 | DUF5945 family protein | - |
| OHM47_RS01345 (OHM47_01345) | 243023..243319 | + | 297 | WP_002936411.1 | hypothetical protein | - |
| OHM47_RS01350 (OHM47_01350) | 243497..244564 | + | 1068 | WP_002936409.1 | Abi family protein | - |
| OHM47_RS01355 (OHM47_01355) | 244618..244860 | + | 243 | WP_002936408.1 | hypothetical protein | - |
| OHM47_RS01360 (OHM47_01360) | 245201..245560 | + | 360 | WP_002936401.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| OHM47_RS01365 (OHM47_01365) | 245570..245935 | + | 366 | WP_000263053.1 | plasmid mobilization relaxosome protein MobC | - |
| OHM47_RS01370 (OHM47_01370) | 245922..247787 | + | 1866 | WP_044674092.1 | SAG1250 family conjugative relaxase | - |
| OHM47_RS01375 (OHM47_01375) | 247831..248535 | - | 705 | WP_002936389.1 | HAD family hydrolase | - |
| OHM47_RS01380 (OHM47_01380) | 248544..249305 | - | 762 | WP_002936387.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| OHM47_RS01385 (OHM47_01385) | 249486..250436 | + | 951 | WP_043033073.1 | ROK family glucokinase | - |
| OHM47_RS01390 (OHM47_01390) | 250673..251098 | + | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| OHM47_RS01395 (OHM47_01395) | 251132..251647 | + | 516 | WP_002936382.1 | galactose-6-phosphate isomerase subunit LacB | - |
| OHM47_RS01400 (OHM47_01400) | 251659..252591 | + | 933 | WP_002936379.1 | tagatose-6-phosphate kinase | - |
| OHM47_RS01405 (OHM47_01405) | 252594..253574 | + | 981 | WP_003084249.1 | tagatose-bisphosphate aldolase | - |
| OHM47_RS01410 (OHM47_01410) | 253602..253919 | + | 318 | WP_003082802.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| OHM47_RS01415 (OHM47_01415) | 253919..255634 | + | 1716 | WP_002938634.1 | lactose-specific PTS transporter subunit EIIC | - |
| OHM47_RS01420 (OHM47_01420) | 255700..257106 | + | 1407 | WP_002938631.1 | 6-phospho-beta-galactosidase | - |
| OHM47_RS01425 (OHM47_01425) | 257131..257409 | + | 279 | WP_002938623.1 | DUF3884 family protein | - |
| OHM47_RS01430 (OHM47_01430) | 257432..258319 | + | 888 | WP_000769130.1 | aldose 1-epimerase family protein | - |
| OHM47_RS01435 (OHM47_01435) | 258508..258732 | + | 225 | WP_000284847.1 | helix-turn-helix transcriptional regulator | - |
| OHM47_RS01440 (OHM47_01440) | 258867..259028 | + | 162 | WP_153299043.1 | hypothetical protein | - |
| OHM47_RS01445 (OHM47_01445) | 259192..260946 | + | 1755 | WP_002938620.1 | hypothetical protein ; Integrase | Integrase |
| OHM47_RS01450 (OHM47_01450) | 261052..261314 | - | 263 | Protein_253 | transposase family protein | - |
| OHM47_RS01455 (OHM47_01455) | 261540..262652 | + | 1113 | WP_043033074.1 | UDP-galactopyranose mutase | - |
| OHM47_RS01460 (OHM47_01460) | 262752..263297 | - | 546 | WP_002941732.1 | NADPH-dependent FMN reductase | - |
| OHM47_RS01465 (OHM47_01465) | 263360..263809 | - | 450 | WP_002938613.1 | MarR family transcriptional regulator | - |
| OHM47_RS01470 (OHM47_01470) | 264023..264520 | + | 498 | WP_043033075.1 | DUF5590 domain-containing protein | - |
| OHM47_RS01475 (OHM47_01475) | 264517..265698 | + | 1182 | WP_043033076.1 | pyridoxal phosphate-dependent aminotransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|