MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74547 bp
Accession: NZ_CP109937 Location: 909534..984080 Organism: Streptococcus suis strain TRG6 Replicon: chromosome
Accession: NZ_CP109937 Location: 909534..984080 Organism: Streptococcus suis strain TRG6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM52_RS04555 (OHM52_04555) | 905212..905919 | - | 708 | WP_014638281.1 | ABC transporter ATP-binding protein | - |
| OHM52_RS04560 (OHM52_04560) | 905912..906286 | - | 375 | WP_014638280.1 | GntR family transcriptional regulator | - |
| OHM52_RS04565 (OHM52_04565) | 906440..909550 | + | 3111 | WP_024395107.1 | DNA polymerase III subunit alpha | - |
| OHM52_RS04570 (OHM52_04570) | 909635..910645 | + | 1011 | WP_024395108.1 | 6-phosphofructokinase | - |
| OHM52_RS04575 (OHM52_04575) | 910711..912216 | + | 1506 | WP_024385559.1 | pyruvate kinase | - |
| OHM52_RS04580 (OHM52_04580) | 912378..915560 | + | 3183 | WP_264516790.1 | IgM protease | VF |
| OHM52_RS04585 (OHM52_04585) | 915885..916994 | - | 1110 | WP_024395110.1 | FAD-binding oxidoreductase | - |
| OHM52_RS04590 (OHM52_04590) | 917079..917696 | + | 618 | WP_011922094.1 | GDSL-type esterase/lipase family protein | - |
| OHM52_RS04595 (OHM52_04595) | 917739..918281 | + | 543 | WP_014736040.1 | signal peptidase I | - |
| OHM52_RS04600 (OHM52_04600) | 918330..919586 | - | 1257 | WP_248041904.1 | ISL3 family transposase IS1193D | Transposase |
| OHM52_RS04605 (OHM52_04605) | 919893..921704 | + | 1812 | WP_024381447.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| OHM52_RS04610 (OHM52_04610) | 922047..923210 | - | 1164 | Protein_875 | IS30 family transposase | - |
| OHM52_RS04615 (OHM52_04615) | 923410..923784 | + | 375 | WP_043032857.1 | DUF1149 family protein | - |
| OHM52_RS04620 (OHM52_04620) | 923786..924637 | + | 852 | WP_024394325.1 | DegV family protein | - |
| OHM52_RS04625 (OHM52_04625) | 924646..925413 | + | 768 | WP_024394324.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| OHM52_RS04630 (OHM52_04630) | 925410..926621 | + | 1212 | WP_024394323.1 | CCA tRNA nucleotidyltransferase | - |
| OHM52_RS04635 (OHM52_04635) | 926614..928482 | + | 1869 | WP_024394322.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| OHM52_RS04640 (OHM52_04640) | 928483..928818 | + | 336 | WP_024394321.1 | hypothetical protein | - |
| OHM52_RS04645 (OHM52_04645) | 928914..929873 | + | 960 | WP_024394320.1 | ROK family glucokinase | - |
| OHM52_RS04650 (OHM52_04650) | 929999..930277 | + | 279 | WP_024394319.1 | hypothetical protein | - |
| OHM52_RS04655 (OHM52_04655) | 930289..930591 | + | 303 | WP_024394318.1 | hypothetical protein | - |
| OHM52_RS04660 (OHM52_04660) | 930644..931483 | + | 840 | WP_024394317.1 | thymidylate synthase | - |
| OHM52_RS04665 (OHM52_04665) | 931659..932171 | + | 513 | WP_192062960.1 | dihydrofolate reductase | - |
| OHM52_RS04670 (OHM52_04670) | 932369..933595 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| OHM52_RS04675 (OHM52_04675) | 933651..934238 | + | 588 | WP_014638915.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| OHM52_RS04680 (OHM52_04680) | 934261..934674 | + | 414 | WP_024394314.1 | nucleoside-diphosphate kinase | - |
| OHM52_RS04685 (OHM52_04685) | 934770..936602 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| OHM52_RS04690 (OHM52_04690) | 936652..936834 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| OHM52_RS04695 (OHM52_04695) | 936969..938276 | + | 1308 | WP_002934980.1 | excalibur calcium-binding domain-containing protein | - |
| OHM52_RS04700 (OHM52_04700) | 938338..938562 | + | 225 | WP_002934981.1 | hypothetical protein | - |
| OHM52_RS04705 (OHM52_04705) | 938661..939242 | + | 582 | WP_002934983.1 | thymidine kinase | - |
| OHM52_RS04710 (OHM52_04710) | 939523..940602 | + | 1080 | WP_002934984.1 | peptide chain release factor 1 | - |
| OHM52_RS04715 (OHM52_04715) | 940602..941435 | + | 834 | WP_002934985.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| OHM52_RS04720 (OHM52_04720) | 941422..942030 | + | 609 | WP_009909811.1 | L-threonylcarbamoyladenylate synthase | - |
| OHM52_RS04725 (OHM52_04725) | 942027..942458 | + | 432 | WP_009909813.1 | GNAT family N-acetyltransferase | - |
| OHM52_RS04730 (OHM52_04730) | 942482..943741 | + | 1260 | WP_002934988.1 | serine hydroxymethyltransferase | - |
| OHM52_RS04735 (OHM52_04735) | 943741..944715 | + | 975 | WP_002934989.1 | nucleoid-associated protein | - |
| OHM52_RS04740 (OHM52_04740) | 944716..945315 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
| OHM52_RS04745 (OHM52_04745) | 945416..946174 | + | 759 | WP_002934991.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| OHM52_RS04750 (OHM52_04750) | 946191..946943 | + | 753 | WP_002934992.1 | DUF6287 domain-containing protein | - |
| OHM52_RS04755 (OHM52_04755) | 946940..947272 | + | 333 | WP_002934993.1 | HIRAN domain-containing protein | - |
| OHM52_RS04760 (OHM52_04760) | 947293..948150 | - | 858 | WP_074390708.1 | hypothetical protein | - |
| OHM52_RS04765 (OHM52_04765) | 948268..949056 | - | 789 | WP_002934995.1 | hypothetical protein | - |
| OHM52_RS04770 (OHM52_04770) | 949257..950954 | + | 1698 | WP_024394313.1 | AAA family ATPase | - |
| OHM52_RS04775 (OHM52_04775) | 950951..952000 | + | 1050 | WP_002934997.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| OHM52_RS04780 (OHM52_04780) | 952162..953712 | - | 1551 | WP_002934999.1 | glutamine-hydrolyzing GMP synthase | - |
| OHM52_RS04785 (OHM52_04785) | 953988..954686 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| OHM52_RS04790 (OHM52_04790) | 954789..955121 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| OHM52_RS04795 (OHM52_04795) | 955134..956708 | + | 1575 | WP_002935002.1 | signal recognition particle protein | - |
| OHM52_RS04800 (OHM52_04800) | 956902..957570 | + | 669 | WP_002935003.1 | SatD family protein | - |
| OHM52_RS04805 (OHM52_04805) | 957574..958314 | + | 741 | WP_009909823.1 | DUF3307 domain-containing protein | - |
| OHM52_RS04810 (OHM52_04810) | 958380..958901 | + | 522 | WP_002935005.1 | AAA family ATPase | - |
| OHM52_RS04815 (OHM52_04815) | 959068..960138 | + | 1071 | WP_002935006.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| OHM52_RS04820 (OHM52_04820) | 960208..961716 | - | 1509 | WP_013730362.1 | Phosphomannomutase/phosphoglucomutase | VF |
| OHM52_RS04825 (OHM52_04825) | 961792..962733 | - | 942 | WP_002935009.1 | sensor histidine kinase | - |
| OHM52_RS04830 (OHM52_04830) | 962730..963395 | - | 666 | WP_009909826.1 | Response regulator protein GraR | VF |
| OHM52_RS04835 (OHM52_04835) | 963434..963691 | - | 258 | WP_002935012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OHM52_RS04840 (OHM52_04840) | 963681..963920 | - | 240 | WP_002935014.1 | DUF6290 family protein | Antitoxin Detail |
| OHM52_RS04845 (OHM52_04845) | 964012..965983 | - | 1972 | Protein_922 | FtsX-like permease family protein | - |
| OHM52_RS04850 (OHM52_04850) | 965984..966736 | - | 753 | WP_011922409.1 | ABC transporter ATP-binding protein YxdL | VF |
| OHM52_RS04855 (OHM52_04855) | 966872..967606 | - | 735 | WP_011922410.1 | ABC transporter permease | - |
| OHM52_RS04860 (OHM52_04860) | 967608..968354 | - | 747 | WP_011922411.1 | ABC transporter permease | - |
| OHM52_RS04865 (OHM52_04865) | 968356..969258 | - | 903 | WP_011922412.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| OHM52_RS04870 (OHM52_04870) | 969203..969652 | - | 450 | WP_264516791.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| OHM52_RS04875 (OHM52_04875) | 969665..969805 | - | 141 | WP_012775106.1 | hypothetical protein | - |
| OHM52_RS04880 (OHM52_04880) | 969945..971111 | - | 1167 | WP_024394863.1 | ATP-grasp domain-containing protein | - |
| OHM52_RS04885 (OHM52_04885) | 971129..971854 | - | 726 | WP_024394864.1 | alpha/beta hydrolase-fold protein | - |
| OHM52_RS04890 (OHM52_04890) | 971885..972712 | - | 828 | WP_011922416.1 | alpha/beta hydrolase | - |
| OHM52_RS04895 (OHM52_04895) | 972826..973830 | - | 1005 | WP_024394865.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| OHM52_RS04900 (OHM52_04900) | 973895..974730 | - | 836 | Protein_933 | AraC family transcriptional regulator | - |
| OHM52_RS04905 (OHM52_04905) | 974807..976141 | - | 1335 | WP_024394866.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| OHM52_RS04910 (OHM52_04910) | 976337..976711 | - | 375 | Protein_935 | HAD family hydrolase | - |
| OHM52_RS04915 (OHM52_04915) | 976732..977088 | - | 357 | WP_225533303.1 | hypothetical protein | - |
| OHM52_RS04920 (OHM52_04920) | 977273..978472 | - | 1200 | WP_014636929.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OHM52_RS04925 (OHM52_04925) | 978495..978722 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| OHM52_RS04930 (OHM52_04930) | 979001..979225 | - | 225 | WP_014636930.1 | helix-turn-helix transcriptional regulator | - |
| OHM52_RS04935 (OHM52_04935) | 979407..981272 | - | 1866 | WP_014636931.1 | SAG1250 family conjugative relaxase | - |
| OHM52_RS04940 (OHM52_04940) | 981259..981624 | - | 366 | WP_014636932.1 | MobC family plasmid mobilization relaxosome protein | - |
| OHM52_RS04945 (OHM52_04945) | 981631..981993 | - | 363 | WP_014636933.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| OHM52_RS04950 (OHM52_04950) | 982310..984853 | - | 2544 | WP_000601012.1 | AAA family ATPase | - |
| OHM52_RS04955 (OHM52_04955) | 984854..985621 | - | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | - |
| OHM52_RS04960 (OHM52_04960) | 985621..986097 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | - |
| OHM52_RS04965 (OHM52_04965) | 986167..986457 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| OHM52_RS04970 (OHM52_04970) | 986508..986897 | - | 390 | WP_000048066.1 | DUF5945 family protein | - |
| OHM52_RS04975 (OHM52_04975) | 986894..987121 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| OHM52_RS04980 (OHM52_04980) | 987149..988249 | - | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|