MGE detailed information
MGE type: Prophage MGE length: 46157 bp
Accession: NZ_CP109933 Location: 1142668..1188824 Organism: Staphylococcus aureus strain SASWT1215 Replicon: chromosome
Accession: NZ_CP109933 Location: 1142668..1188824 Organism: Staphylococcus aureus strain SASWT1215 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NT398_RS05635 (1138168) | 1138168..1139487 | - | 1320 | WP_001241246.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| NT398_RS05640 (1139514) | 1139514..1140341 | - | 828 | WP_000927632.1 | sulfite exporter TauE/SafE family protein | - |
| NT398_RS05645 (1140354) | 1140354..1141202 | - | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
| NT398_RS05650 (1141250) | 1141250..1141333 | - | 84 | WP_016170465.1 | hypothetical protein | - |
| NT398_RS05655 (1141587) | 1141587..1142654 | - | 1068 | WP_000267236.1 | nitronate monooxygenase family protein | - |
| NT398_RS05660 (1142668) | 1142668..1143708 | - | 1041 | WP_000582326.1 | CNNM domain-containing protein | - |
| NT398_RS05665 (1144073) | 1144073..1144387 | + | 315 | WP_000274029.1 | hypothetical protein | - |
| NT398_RS05670 (1144393) | 1144393..1144532 | - | 140 | Protein_1089 | hypothetical protein | - |
| NT398_RS05675 (1145267) | 1145267..1146712 | - | 1446 | WP_001148136.1 | SH3 domain-containing protein | - |
| NT398_RS05680 (1146693) | 1146693..1147130 | - | 438 | WP_000354132.1 | phage holin | - |
| NT398_RS05685 (1147186) | 1147186..1147581 | - | 396 | WP_217658510.1 | hypothetical protein | - |
| NT398_RS05690 (1147587) | 1147587..1148759 | - | 1173 | WP_217658509.1 | BppU family phage baseplate upper protein | - |
| NT398_RS05695 (1148772) | 1148772..1150646 | - | 1875 | WP_217659177.1 | hypothetical protein | VF |
| NT398_RS05700 (1150780) | 1150780..1151079 | - | 300 | WP_053868929.1 | DUF2951 domain-containing protein | - |
| NT398_RS05705 (1151120) | 1151120..1151293 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| NT398_RS05710 (1151297) | 1151297..1151674 | - | 378 | WP_217658889.1 | DUF2977 domain-containing protein | - |
| NT398_RS05715 (1151674) | 1151674..1153497 | - | 1824 | WP_217659176.1 | BppU family phage baseplate upper protein | - |
| NT398_RS05720 (1153497) | 1153497..1155395 | - | 1899 | WP_217658887.1 | hypothetical protein | - |
| NT398_RS05725 (1155408) | 1155408..1157294 | - | 1887 | WP_217658507.1 | phage tail protein | - |
| NT398_RS05730 (1157305) | 1157305..1158240 | - | 936 | WP_031897669.1 | phage tail family protein | - |
| NT398_RS05735 (1158255) | 1158255..1161224 | - | 2970 | WP_217659175.1 | terminase | - |
| NT398_RS05740 (1161227) | 1161227..1161568 | - | 342 | WP_001580347.1 | hypothetical protein | - |
| NT398_RS05745 (1161589) | 1161589..1162083 | - | 495 | WP_000141082.1 | tail assembly chaperone | - |
| NT398_RS05750 (1162145) | 1162145..1162705 | - | 561 | WP_000046067.1 | hypothetical protein | - |
| NT398_RS05755 (1162692) | 1162692..1163129 | - | 438 | WP_000270196.1 | DUF3168 domain-containing protein | - |
| NT398_RS05760 (1163142) | 1163142..1163555 | - | 414 | WP_001151335.1 | HK97 gp10 family phage protein | - |
| NT398_RS05765 (1163542) | 1163542..1163877 | - | 336 | WP_000482986.1 | phage head closure protein | - |
| NT398_RS05770 (1163870) | 1163870..1164184 | - | 315 | WP_000338936.1 | phage head-tail connector protein | - |
| NT398_RS05775 (1164184) | 1164184..1164510 | - | 327 | WP_000278799.1 | Rho termination factor N-terminal domain-containing protein | - |
| NT398_RS05780 (1164527) | 1164527..1165351 | - | 825 | WP_001135558.1 | N4-gp56 family major capsid protein | - |
| NT398_RS05785 (1165372) | 1165372..1165968 | - | 597 | WP_000366932.1 | phage scaffolding protein | - |
| NT398_RS05790 (1166066) | 1166066..1167046 | - | 981 | WP_049886845.1 | phage head morphogenesis protein | - |
| NT398_RS05795 (1166985) | 1166985..1168436 | - | 1452 | WP_234740167.1 | phage portal protein | - |
| NT398_RS05800 (1168417) | 1168417..1169625 | - | 1209 | WP_001606760.1 | PBSX family phage terminase large subunit | - |
| NT398_RS05805 (1169618) | 1169618..1170112 | - | 495 | WP_029550565.1 | terminase small subunit | - |
| NT398_RS05810 (1170463) | 1170463..1170864 | - | 402 | WP_217658505.1 | hypothetical protein | - |
| NT398_RS05815 (1170976) | 1170976..1171080 | - | 105 | Protein_1118 | hypothetical protein | - |
| NT398_RS05820 (1171077) | 1171077..1171283 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| NT398_RS05825 (1171320) | 1171320..1171856 | - | 537 | WP_217658503.1 | dUTP diphosphatase | - |
| NT398_RS05830 (1171853) | 1171853..1172098 | - | 246 | WP_217658511.1 | DUF1024 family protein | - |
| NT398_RS05835 (1172091) | 1172091..1172398 | - | 308 | Protein_1122 | hypothetical protein | - |
| NT398_RS05840 (1172395) | 1172395..1172742 | - | 348 | WP_000979209.1 | YopX family protein | - |
| NT398_RS05845 (1172739) | 1172739..1173119 | - | 381 | WP_001668982.1 | hypothetical protein | - |
| NT398_RS05850 (1173122) | 1173122..1173328 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| NT398_RS05855 (1173342) | 1173342..1173590 | - | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| NT398_RS05860 (1173587) | 1173587..1173844 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| NT398_RS05865 (1173844) | 1173844..1174215 | - | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| NT398_RS05870 (1174228) | 1174228..1174632 | - | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NT398_RS05875 (1174641) | 1174641..1174859 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| NT398_RS05880 (1174866) | 1174866..1175759 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| NT398_RS05885 (1175789) | 1175789..1176259 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| NT398_RS05890 (1176260) | 1176260..1176877 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| NT398_RS05895 (1176958) | 1176958..1177878 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| NT398_RS05900 (1177880) | 1177880..1179823 | - | 1944 | WP_000700565.1 | AAA family ATPase | - |
| NT398_RS05905 (1179832) | 1179832..1180095 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| NT398_RS05910 (1180104) | 1180104..1180364 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| NT398_RS05915 (1180369) | 1180369..1180671 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| NT398_RS05920 (1180766) | 1180766..1180927 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| NT398_RS05925 (1180920) | 1180920..1181141 | - | 222 | WP_000594788.1 | hypothetical protein | - |
| NT398_RS05930 (1181212) | 1181212..1181877 | + | 666 | WP_001807461.1 | hypothetical protein | - |
| NT398_RS05935 (1181898) | 1181898..1181966 | - | 69 | Protein_1142 | hypothetical protein | - |
| NT398_RS05940 (1181963) | 1181963..1182724 | - | 762 | WP_217658518.1 | phage antirepressor KilAC domain-containing protein | - |
| NT398_RS05945 (1182726) | 1182726..1182911 | - | 186 | WP_000933363.1 | helix-turn-helix transcriptional regulator | - |
| NT398_RS05950 (1183351) | 1183351..1183560 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| NT398_RS05955 (1183550) | 1183550..1183693 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| NT398_RS05960 (1183708) | 1183708..1184151 | - | 444 | WP_023487065.1 | hypothetical protein | - |
| NT398_RS05965 (1184164) | 1184164..1184412 | - | 249 | WP_000272859.1 | helix-turn-helix transcriptional regulator | - |
| NT398_RS05970 (1184576) | 1184576..1184899 | + | 324 | WP_001260487.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| NT398_RS05975 (1184912) | 1184912..1185376 | + | 465 | WP_031767738.1 | toxin | Toxin Detail |
| NT398_RS05980 (1185408) | 1185408..1186112 | + | 705 | WP_000440838.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NT398_RS05985 (1186310) | 1186310..1187359 | + | 1050 | WP_217659178.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NT398_RS05990 (1187427) | 1187427..1188824 | - | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| NT398_RS05995 (1188975) | 1188975..1189439 | - | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| NT398_RS06000 (1189429) | 1189429..1190679 | - | 1251 | WP_001006450.1 | cysteine desulfurase | - |
| NT398_RS06005 (1190785) | 1190785..1192092 | - | 1308 | WP_000205567.1 | Fe-S cluster assembly protein SufD | - |
| NT398_RS06010 (1192190) | 1192190..1192951 | - | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|