MGE detailed information
MGE type: Prophage MGE length: 53339 bp
Accession: NZ_CP109932 Location: 1700536..1753874 Organism: Pseudomonas aeruginosa strain PALA43 Replicon: chromosome
Accession: NZ_CP109932 Location: 1700536..1753874 Organism: Pseudomonas aeruginosa strain PALA43 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA43_RS07845 (PALA43_01563) | 1695626..1695973 | - | 348 | WP_003113222.1 | SMI1/KNR4 family protein | - |
| PALA43_RS07850 (PALA43_01564) | 1695963..1696577 | - | 615 | WP_003118887.1 | DMP19 family protein | - |
| PALA43_RS07855 (PALA43_01565) | 1696768..1699539 | - | 2772 | WP_269972480.1 | metalloprotease ImpA | - |
| PALA43_RS07860 | 1699639..1699782 | + | 144 | WP_153274318.1 | hypothetical protein | - |
| PALA43_RS07865 (PALA43_01566) | 1700108..1700443 | - | 336 | WP_269972481.1 | nuclease-related domain-containing protein | - |
| PALA43_RS07870 (PALA43_01567) | 1700536..1701657 | - | 1122 | WP_080911355.1 | Fic family protein | - |
| PALA43_RS07875 | 1701916..1702053 | - | 138 | WP_003113217.1 | hypothetical protein | - |
| PALA43_RS07880 (PALA43_01568) | 1702656..1702838 | + | 183 | WP_019725766.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PALA43_RS07885 (PALA43_01569) | 1702871..1703293 | + | 423 | WP_019725767.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PALA43_RS07890 (PALA43_01571) | 1703539..1704510 | - | 972 | WP_025982283.1 | hypothetical protein | - |
| PALA43_RS07895 (PALA43_01572) | 1704495..1705187 | - | 693 | WP_019725770.1 | hypothetical protein | - |
| PALA43_RS07900 (PALA43_01573) | 1705184..1705726 | - | 543 | WP_025982284.1 | hypothetical protein | - |
| PALA43_RS07905 (PALA43_01574) | 1705723..1706646 | - | 924 | WP_019725772.1 | hypothetical protein | - |
| PALA43_RS07910 (PALA43_01575) | 1706643..1707119 | - | 477 | WP_019725773.1 | phage tail assembly chaperone | - |
| PALA43_RS07915 (PALA43_01576) | 1707116..1709737 | - | 2622 | WP_019725774.1 | phage tail protein | - |
| PALA43_RS07920 (PALA43_01577) | 1709747..1710271 | - | 525 | WP_033966686.1 | phage tail protein | - |
| PALA43_RS07925 (PALA43_01578) | 1710264..1711436 | - | 1173 | WP_019725776.1 | baseplate J/gp47 family protein | - |
| PALA43_RS07930 (PALA43_01579) | 1711433..1711750 | - | 318 | WP_019725777.1 | DUF2590 family protein | - |
| PALA43_RS07935 (PALA43_01580) | 1711747..1714116 | - | 2370 | WP_222235989.1 | phage tail tape measure protein | - |
| PALA43_RS07940 | 1714130..1714270 | - | 141 | WP_019725779.1 | hypothetical protein | - |
| PALA43_RS07945 (PALA43_01581) | 1714294..1714590 | - | 297 | WP_019725780.1 | putative phage tail assembly chaperone | - |
| PALA43_RS07950 (PALA43_01582) | 1714587..1715102 | - | 516 | WP_019725781.1 | lysis system i-spanin subunit Rz | - |
| PALA43_RS07955 (PALA43_01583) | 1715099..1715560 | - | 462 | WP_019725782.1 | lysozyme | - |
| PALA43_RS07960 (PALA43_01584) | 1715557..1715862 | - | 306 | WP_019725783.1 | hypothetical protein | - |
| PALA43_RS07965 (PALA43_01585) | 1715859..1716071 | - | 213 | WP_019725784.1 | TraR/DksA C4-type zinc finger protein | - |
| PALA43_RS07970 (PALA43_01586) | 1716071..1716520 | - | 450 | WP_023122750.1 | DUF2597 family protein | - |
| PALA43_RS07975 (PALA43_01587) | 1716524..1717639 | - | 1116 | WP_019725786.1 | DUF2586 domain-containing protein | - |
| PALA43_RS07980 (PALA43_01588) | 1717652..1718320 | - | 669 | WP_019725787.1 | virion morphogenesis protein | - |
| PALA43_RS07985 (PALA43_01589) | 1718313..1718750 | - | 438 | WP_019725788.1 | phage tail protein | - |
| PALA43_RS07990 (PALA43_01590) | 1718750..1719211 | - | 462 | WP_019725789.1 | head completion/stabilization protein | - |
| PALA43_RS07995 (PALA43_01591) | 1719309..1720043 | - | 735 | WP_019725790.1 | phage terminase small subunit | - |
| PALA43_RS08000 (PALA43_01592) | 1720040..1721062 | - | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| PALA43_RS08005 (PALA43_01593) | 1721062..1722015 | - | 954 | WP_019725791.1 | GPO family capsid scaffolding protein | - |
| PALA43_RS08010 (PALA43_01594) | 1722173..1724221 | + | 2049 | WP_019725792.1 | terminase family protein | - |
| PALA43_RS08015 (PALA43_01595) | 1724160..1724987 | + | 828 | WP_063878981.1 | phage portal protein | - |
| PALA43_RS08020 | 1725032..1725289 | + | 258 | WP_019725794.1 | ogr/Delta-like zinc finger family protein | - |
| PALA43_RS08025 (PALA43_01597) | 1725855..1726133 | - | 279 | WP_019725795.1 | hypothetical protein | - |
| PALA43_RS08030 (PALA43_01598) | 1726130..1726360 | - | 231 | WP_019725796.1 | hypothetical protein | - |
| PALA43_RS08035 (PALA43_01599) | 1726357..1726602 | - | 246 | WP_019725797.1 | Arc family DNA-binding protein | - |
| PALA43_RS08040 (PALA43_01600) | 1726595..1726861 | - | 267 | WP_019725798.1 | hypothetical protein | - |
| PALA43_RS08045 (PALA43_01601) | 1726932..1727291 | - | 360 | WP_019725799.1 | hypothetical protein | - |
| PALA43_RS08050 (PALA43_01602) | 1727321..1727668 | - | 348 | WP_019725800.1 | hypothetical protein | - |
| PALA43_RS08055 (PALA43_01603) | 1727684..1728085 | - | 402 | WP_019725801.1 | hypothetical protein | - |
| PALA43_RS08060 (PALA43_01604) | 1728527..1731217 | - | 2691 | WP_019725802.1 | toprim domain-containing protein | - |
| PALA43_RS08065 (PALA43_01605) | 1731227..1731457 | - | 231 | WP_019725803.1 | hypothetical protein | - |
| PALA43_RS08070 (PALA43_01606) | 1731555..1731794 | + | 240 | WP_019725804.1 | helix-turn-helix transcriptional regulator | - |
| PALA43_RS08075 | 1731799..1732818 | + | 1020 | Protein_1593 | integrase | - |
| PALA43_RS08085 (PALA43_01608) | 1733019..1736756 | - | 3738 | WP_003109019.1 | hypothetical protein | VF |
| PALA43_RS08090 (PALA43_01609) | 1736863..1738716 | - | 1854 | WP_003085035.1 | RNA polymerase sigma factor RpoD | - |
| PALA43_RS08095 (PALA43_01610) | 1738796..1740790 | - | 1995 | WP_080911356.1 | DNA primase | - |
| PALA43_RS08100 (PALA43_01611) | 1740873..1741322 | - | 450 | WP_003085042.1 | putative protein YqeY | VF |
| PALA43_RS08105 (PALA43_01612) | 1741392..1741607 | - | 216 | WP_003085057.1 | 30S ribosomal protein S21 | - |
| PALA43_RS08110 (PALA43_01613) | 1741808..1742833 | + | 1026 | WP_003129196.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| PALA43_RS08115 (PALA43_01614) | 1742912..1743481 | - | 570 | WP_003085061.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| PALA43_RS08120 (PALA43_01615) | 1743565..1743918 | + | 354 | WP_003099587.1 | dihydroneopterin aldolase | - |
| PALA43_RS08125 (PALA43_01616) | 1743909..1744451 | + | 543 | WP_003137363.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| PALA43_RS08130 (PALA43_01617) | 1744424..1745656 | - | 1233 | WP_003099584.1 | multifunctional CCA addition/repair protein | - |
| PALA43_RS08135 (PALA43_01618) | 1745700..1746206 | - | 507 | WP_003085071.1 | DUF4136 domain-containing protein | - |
| PALA43_RS08140 (PALA43_01619) | 1746301..1747854 | - | 1554 | WP_003099581.1 | SpoVR family protein | - |
| PALA43_RS08145 (PALA43_01620) | 1747851..1749122 | - | 1272 | WP_003099579.1 | YeaH/YhbH family protein | - |
| PALA43_RS08150 (PALA43_01621) | 1749223..1751145 | - | 1923 | WP_003085078.1 | PrkA family serine protein kinase | - |
| PALA43_RS08155 (PALA43_01622) | 1751424..1751756 | - | 333 | WP_003085081.1 | thiosulfate sulfurtransferase GlpE | - |
| PALA43_RS08160 (PALA43_01623) | 1751800..1752651 | - | 852 | WP_003099572.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| PALA43_RS08165 (PALA43_01624) | 1752651..1753031 | - | 381 | WP_003085085.1 | Co2+/Mg2+ efflux protein ApaG | - |
| PALA43_RS08170 (PALA43_01625) | 1753068..1753874 | - | 807 | WP_003085087.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PALA43_RS08175 (PALA43_01626) | 1753990..1754976 | - | 987 | WP_003117956.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| PALA43_RS08180 (PALA43_01627) | 1754973..1756265 | - | 1293 | WP_010793495.1 | peptidylprolyl isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|