MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 94022 bp
Accession: NZ_CP109920 Location: 4917623..5011644 Organism: Pseudomonas aeruginosa strain PALA39 Replicon: chromosome
Accession: NZ_CP109920 Location: 4917623..5011644 Organism: Pseudomonas aeruginosa strain PALA39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA39_RS23130 (PALA39_04578) | 4913111..4913722 | - | 612 | WP_004348355.1 | fimbrial protein | - |
| PALA39_RS23135 | 4914166..4914543 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| PALA39_RS23140 (PALA39_04580) | 4915128..4915766 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| PALA39_RS23145 (PALA39_04581) | 4916151..4916711 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| PALA39_RS23150 (PALA39_04582) | 4916832..4917236 | - | 405 | WP_003112559.1 | thioesterase family protein | - |
| PALA39_RS23160 (PALA39_04583) | 4917760..4918626 | + | 867 | WP_003120956.1 | ParA family protein | - |
| PALA39_RS23165 (PALA39_04584) | 4918628..4919365 | + | 738 | WP_016852973.1 | hypothetical protein | - |
| PALA39_RS23170 (PALA39_04585) | 4919362..4919853 | + | 492 | WP_016852972.1 | hypothetical protein | - |
| PALA39_RS23175 (PALA39_04586) | 4919850..4920512 | + | 663 | WP_023082646.1 | hypothetical protein | - |
| PALA39_RS23180 (PALA39_04587) | 4920509..4921192 | + | 684 | WP_016852970.1 | hypothetical protein | - |
| PALA39_RS23185 (PALA39_04588) | 4921192..4921893 | + | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| PALA39_RS23190 (PALA39_04589) | 4921890..4922597 | + | 708 | WP_016852968.1 | HNH endonuclease signature motif containing protein | - |
| PALA39_RS23195 (PALA39_04590) | 4922581..4922799 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| PALA39_RS23200 (PALA39_04591) | 4922796..4924139 | + | 1344 | WP_016852967.1 | replicative DNA helicase | - |
| PALA39_RS23205 | 4924578..4925024 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| PALA39_RS23210 (PALA39_04593) | 4925202..4925387 | + | 186 | WP_019396657.1 | hypothetical protein | - |
| PALA39_RS23215 (PALA39_04594) | 4925377..4925904 | + | 528 | WP_019396658.1 | hypothetical protein | - |
| PALA39_RS23220 (PALA39_04595) | 4925901..4926158 | + | 258 | WP_019396659.1 | hypothetical protein | - |
| PALA39_RS23225 (PALA39_04596) | 4926151..4926390 | + | 240 | WP_016852964.1 | hypothetical protein | - |
| PALA39_RS23230 (PALA39_04597) | 4926383..4926616 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA39_RS23235 (PALA39_04598) | 4926616..4927638 | + | 1023 | WP_019416389.1 | nucleoid-associated protein YejK | - |
| PALA39_RS23240 (PALA39_04599) | 4927635..4928525 | + | 891 | WP_016851600.1 | DNA adenine methylase | - |
| PALA39_RS23245 (PALA39_04600) | 4928546..4928815 | + | 270 | WP_031640158.1 | Arc family DNA-binding protein | - |
| PALA39_RS23250 (PALA39_04601) | 4928812..4930548 | + | 1737 | WP_023464346.1 | ParB family protein | - |
| PALA39_RS23255 (PALA39_04602) | 4930576..4931343 | + | 768 | WP_016851602.1 | DUF2857 domain-containing protein | - |
| PALA39_RS23260 (PALA39_04603) | 4931340..4932644 | + | 1305 | WP_023101569.1 | STY4528 family pathogenicity island replication protein | - |
| PALA39_RS23265 (PALA39_04604) | 4932641..4933438 | + | 798 | WP_235583931.1 | hypothetical protein | - |
| PALA39_RS23270 (PALA39_04606) | 4933595..4934323 | + | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA39_RS23275 (PALA39_04607) | 4934329..4934877 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| PALA39_RS23280 (PALA39_04608) | 4934925..4935755 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| PALA39_RS23285 (PALA39_04609) | 4935785..4936243 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| PALA39_RS23290 | 4936349..4936543 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| PALA39_RS23295 | 4936758..4936955 | + | 198 | WP_071533909.1 | CrpP family ICE-associated protein | - |
| PALA39_RS23300 (PALA39_04610) | 4937071..4938990 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| PALA39_RS23305 (PALA39_04611) | 4939297..4939506 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PALA39_RS23310 (PALA39_04612) | 4939728..4941617 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| PALA39_RS23315 (PALA39_04613) | 4941614..4943590 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| PALA39_RS23320 | 4943731..4944075 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| PALA39_RS23325 (PALA39_04614) | 4944146..4944436 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PALA39_RS23330 (PALA39_04615) | 4944433..4944732 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PALA39_RS23335 (PALA39_04616) | 4944934..4946058 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| PALA39_RS23340 (PALA39_04617) | 4946058..4947767 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| PALA39_RS23345 (PALA39_04618) | 4947771..4949096 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| PALA39_RS23350 (PALA39_04619) | 4949086..4949619 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| PALA39_RS23355 (PALA39_04620) | 4949628..4951208 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| PALA39_RS23360 (PALA39_04621) | 4951208..4952287 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA39_RS23365 (PALA39_04622) | 4952309..4952839 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PALA39_RS23370 (PALA39_04623) | 4952836..4953792 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| PALA39_RS23375 (PALA39_04624) | 4953785..4955164 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| PALA39_RS23380 (PALA39_04625) | 4955182..4955619 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| PALA39_RS23385 (PALA39_04626) | 4956538..4956927 | + | 390 | WP_003158173.1 | hypothetical protein | - |
| PALA39_RS23390 (PALA39_04627) | 4957002..4957175 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| PALA39_RS23395 (PALA39_04628) | 4957177..4957311 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA39_RS23400 (PALA39_04629) | 4957636..4958115 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PALA39_RS23405 (PALA39_04630) | 4958253..4958411 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA39_RS23410 (PALA39_04631) | 4958485..4958682 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| PALA39_RS23415 (PALA39_04632) | 4959167..4959874 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| PALA39_RS23420 (PALA39_04633) | 4960110..4960460 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PALA39_RS23425 (PALA39_04634) | 4960517..4961149 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| PALA39_RS23430 (PALA39_04635) | 4961146..4961421 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PALA39_RS23435 (PALA39_04636) | 4961491..4961853 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PALA39_RS23440 (PALA39_04637) | 4961921..4962175 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PALA39_RS23445 (PALA39_04638) | 4962268..4962873 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| PALA39_RS23450 (PALA39_04639) | 4962903..4964348 | + | 1446 | WP_003158168.1 | DUF6094 domain-containing protein | - |
| PALA39_RS23455 | 4964454..4964615 | + | 162 | Protein_4641 | helicase | - |
| PALA39_RS23460 | 4964641..4965071 | - | 431 | Protein_4642 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PALA39_RS23465 (PALA39_04641) | 4965176..4965859 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| PALA39_RS23470 (PALA39_04642) | 4966723..4967097 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| PALA39_RS23475 (PALA39_04643) | 4967122..4967706 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| PALA39_RS23480 (PALA39_04644) | 4967691..4968287 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| PALA39_RS23485 | 4968839..4969231 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| PALA39_RS23490 (PALA39_04645) | 4969250..4969573 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| PALA39_RS23495 (PALA39_04647) | 4970400..4970672 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| PALA39_RS23500 (PALA39_04648) | 4970890..4971588 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| PALA39_RS23505 (PALA39_04649) | 4971599..4972354 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA39_RS23510 (PALA39_04650) | 4972339..4972920 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| PALA39_RS23515 (PALA39_04651) | 4972917..4973417 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PALA39_RS23520 (PALA39_04652) | 4973426..4973695 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PALA39_RS23525 (PALA39_04653) | 4973699..4975930 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA39_RS23530 (PALA39_04654) | 4975930..4976676 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA39_RS23535 | 4976694..4977185 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| PALA39_RS23540 (PALA39_04655) | 4977427..4978908 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PALA39_RS23545 (PALA39_04656) | 4979040..4980149 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| PALA39_RS23550 | 4980195..4980461 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA39_RS23555 (PALA39_04659) | 4980774..4983740 | - | 2967 | Protein_4661 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PALA39_RS23560 (PALA39_04660) | 4983744..4984304 | - | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| PALA39_RS23565 (PALA39_04661) | 4984307..4984915 | - | 609 | WP_014003956.1 | hypothetical protein | - |
| PALA39_RS23570 (PALA39_04662) | 4985212..4985778 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| PALA39_RS23575 (PALA39_04663) | 4985793..4986569 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| PALA39_RS23580 (PALA39_04664) | 4986629..4987213 | - | 585 | WP_004574803.1 | hypothetical protein | VF |
| PALA39_RS23585 (PALA39_04665) | 4987210..4987890 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| PALA39_RS23590 (PALA39_04666) | 4988047..4988298 | + | 252 | WP_046095042.1 | hypothetical protein | - |
| PALA39_RS23595 (PALA39_04667) | 4988392..4988730 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PALA39_RS23600 | 4988727..4988966 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA39_RS23605 (PALA39_04669) | 4988984..4989340 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA39_RS23610 (PALA39_04670) | 4989351..4989737 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| PALA39_RS23615 (PALA39_04671) | 4989734..4990393 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA39_RS23620 (PALA39_04672) | 4990390..4991274 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA39_RS23625 (PALA39_04673) | 4991258..4992763 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA39_RS23630 (PALA39_04674) | 4992741..4993184 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA39_RS23635 (PALA39_04675) | 4993184..4996126 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| PALA39_RS23640 (PALA39_04676) | 4996123..4996407 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| PALA39_RS23645 (PALA39_04677) | 4996404..4997063 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| PALA39_RS23650 (PALA39_04678) | 4997060..4997278 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| PALA39_RS23655 | 4999420..4999851 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA39_RS23660 (PALA39_04680) | 4999851..5000789 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA39_RS23665 (PALA39_04681) | 5000807..5002189 | + | 1383 | WP_023122674.1 | integrating conjugative element protein | - |
| PALA39_RS23670 (PALA39_04682) | 5002189..5002536 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| PALA39_RS23675 (PALA39_04683) | 5002533..5004047 | + | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA39_RS23680 | 5004073..5004396 | - | 324 | WP_071536355.1 | hypothetical protein | - |
| PALA39_RS23685 (PALA39_04684) | 5004515..5004787 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA39_RS23690 (PALA39_04685) | 5004791..5005144 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA39_RS23695 (PALA39_04686) | 5005171..5006085 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| PALA39_RS23700 (PALA39_04687) | 5006111..5006350 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| PALA39_RS23710 (PALA39_04690) | 5008033..5009952 | + | 1920 | WP_016852953.1 | MobH family relaxase | - |
| PALA39_RS23715 (PALA39_04691) | 5009949..5011229 | + | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA39_RS23725 (PALA39_04693) | 5011735..5012409 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PALA39_RS23730 (PALA39_04694) | 5012425..5013072 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PALA39_RS23735 (PALA39_04695) | 5013292..5014116 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PALA39_RS23740 (PALA39_04696) | 5014126..5014632 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PALA39_RS23745 (PALA39_04697) | 5014685..5015983 | - | 1299 | WP_003086128.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|