MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104829 bp
Accession: NZ_CP109920 Location: 2679303..2784131 Organism: Pseudomonas aeruginosa strain PALA39 Replicon: chromosome
Accession: NZ_CP109920 Location: 2679303..2784131 Organism: Pseudomonas aeruginosa strain PALA39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA39_RS12685 (PALA39_02520) | 2674619..2675767 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA39_RS12690 (PALA39_02521) | 2676109..2676753 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA39_RS12695 (PALA39_02522) | 2676754..2678580 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA39_RS12700 (PALA39_02523) | 2678614..2679174 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA39_RS12710 (PALA39_02525) | 2680148..2680756 | + | 609 | WP_124121010.1 | hypothetical protein | - |
| PALA39_RS12715 | 2681145..2681516 | - | 372 | WP_071543422.1 | hypothetical protein | - |
| PALA39_RS12720 (PALA39_02526) | 2681990..2683441 | - | 1452 | WP_031640271.1 | hypothetical protein | - |
| PALA39_RS12725 | 2683588..2683872 | - | 285 | WP_033967546.1 | hypothetical protein | - |
| PALA39_RS12730 (PALA39_02527) | 2683869..2684303 | - | 435 | WP_023123143.1 | hypothetical protein | - |
| PALA39_RS12735 (PALA39_02528) | 2684320..2684577 | - | 258 | WP_023123144.1 | helix-turn-helix domain-containing protein | - |
| PALA39_RS12740 (PALA39_02529) | 2684775..2685731 | - | 957 | WP_015502723.1 | Tyrosine recombinase XerC | VF |
| PALA39_RS12745 (PALA39_02530) | 2686082..2688016 | + | 1935 | WP_003097548.1 | hypothetical protein ; Integrase | Integrase |
| PALA39_RS12750 (PALA39_02531) | 2688136..2689635 | + | 1500 | WP_003097546.1 | IS21 family transposase ISPa36 | Transposase |
| PALA39_RS12755 (PALA39_02532) | 2689622..2690413 | + | 792 | WP_031636494.1 | IS21 family transposase ISPa36 | Transposase |
| PALA39_RS12760 (PALA39_02533) | 2690626..2691933 | - | 1308 | WP_003097539.1 | TolC family protein | - |
| PALA39_RS12765 | 2692140..2692932 | + | 793 | WP_086009121.1 | IS5 family transposase ISStma16 | Transposase |
| PALA39_RS12770 | 2693456..2694097 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA39_RS12775 | 2694205..2694510 | + | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA39_RS12780 (PALA39_02536) | 2694515..2695405 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA39_RS12785 (PALA39_02537) | 2695637..2695921 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA39_RS12790 (PALA39_02538) | 2696050..2696976 | - | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA39_RS12795 (PALA39_02539) | 2696981..2697367 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA39_RS12800 (PALA39_02540) | 2697509..2699815 | - | 2307 | WP_228777907.1 | heavy metal translocating P-type ATPase | - |
| PALA39_RS12805 (PALA39_02541) | 2700103..2700375 | - | 273 | WP_003097518.1 | DUF2933 domain-containing protein | - |
| PALA39_RS12810 (PALA39_02542) | 2700409..2700894 | - | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| PALA39_RS12815 (PALA39_02543) | 2700932..2701912 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA39_RS12820 (PALA39_02544) | 2701938..2703839 | - | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| PALA39_RS12825 (PALA39_02545) | 2704094..2704786 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA39_RS12830 (PALA39_02546) | 2704758..2706194 | + | 1437 | WP_003097498.1 | Sensor histidine kinase CusS | VF |
| PALA39_RS12835 (PALA39_02547) | 2707142..2707471 | + | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| PALA39_RS12840 (PALA39_02548) | 2707485..2707955 | + | 471 | WP_003107243.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| PALA39_RS12845 (PALA39_02549) | 2707968..2708465 | + | 498 | WP_003107241.1 | arsenate reductase ArsC | - |
| PALA39_RS12850 (PALA39_02550) | 2708476..2709561 | + | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| PALA39_RS12855 (PALA39_02551) | 2709576..2709998 | + | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| PALA39_RS12860 (PALA39_02552) | 2710070..2710399 | + | 330 | WP_015014846.1 | PadR family transcriptional regulator | - |
| PALA39_RS12865 (PALA39_02553) | 2710396..2711625 | + | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| PALA39_RS12870 (PALA39_02554) | 2711631..2712161 | + | 531 | WP_003107230.1 | N-acetyltransferase | - |
| PALA39_RS12875 (PALA39_02555) | 2712369..2713832 | - | 1464 | Protein_2542 | chromosome partitioning protein ParB | - |
| PALA39_RS12880 (PALA39_02556) | 2714115..2714560 | - | 446 | Protein_2543 | Efflux pump membrane transporter BepE | VF |
| PALA39_RS12885 (PALA39_02557) | 2714653..2715621 | - | 969 | WP_003158683.1 | Efflux pump periplasmic linker BepF | VF |
| PALA39_RS12890 | 2715679..2715849 | - | 171 | WP_003109767.1 | hypothetical protein | - |
| PALA39_RS12895 (PALA39_02558) | 2716143..2717990 | - | 1848 | WP_003109768.1 | MobH family relaxase | - |
| PALA39_RS12900 (PALA39_02559) | 2718306..2718932 | + | 627 | WP_003109769.1 | hypothetical protein | - |
| PALA39_RS12905 (PALA39_02560) | 2718945..2719577 | + | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| PALA39_RS12910 (PALA39_02561) | 2719662..2720027 | + | 366 | WP_003090216.1 | DUF3742 family protein | - |
| PALA39_RS12915 (PALA39_02562) | 2720039..2721559 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA39_RS12920 (PALA39_02563) | 2721573..2721932 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA39_RS12925 (PALA39_02564) | 2721929..2723323 | - | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| PALA39_RS12930 (PALA39_02565) | 2723333..2724283 | - | 951 | WP_003109771.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA39_RS12935 (PALA39_02566) | 2724280..2724726 | - | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA39_RS12940 (PALA39_02567) | 2724891..2725385 | - | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA39_RS12945 (PALA39_02568) | 2725561..2726328 | - | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| PALA39_RS12950 (PALA39_02569) | 2726353..2729244 | - | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| PALA39_RS12955 (PALA39_02570) | 2729244..2729693 | - | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA39_RS12960 (PALA39_02571) | 2729674..2731092 | - | 1419 | WP_003109776.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA39_RS12965 (PALA39_02572) | 2731082..2731993 | - | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA39_RS12970 (PALA39_02573) | 2731990..2732682 | - | 693 | WP_003105641.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA39_RS12975 (PALA39_02574) | 2732679..2733077 | - | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| PALA39_RS12980 (PALA39_02575) | 2733089..2733448 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA39_RS12985 (PALA39_02576) | 2733465..2733698 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA39_RS12990 (PALA39_02577) | 2733695..2734078 | - | 384 | WP_003105635.1 | RAQPRD family integrative conjugative element protein | - |
| PALA39_RS12995 (PALA39_02578) | 2734282..2734752 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA39_RS13000 (PALA39_02579) | 2734749..2735324 | + | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| PALA39_RS13005 (PALA39_02580) | 2735342..2736256 | + | 915 | WP_003105629.1 | AAA family ATPase | - |
| PALA39_RS13010 (PALA39_02581) | 2736253..2736723 | + | 471 | WP_003105626.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA39_RS13015 (PALA39_02582) | 2736720..2737220 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA39_RS13020 (PALA39_02583) | 2737220..2738122 | + | 903 | WP_003105624.1 | CBASS oligonucleotide cyclase | - |
| PALA39_RS13025 (PALA39_02584) | 2738161..2738886 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA39_RS13030 (PALA39_02585) | 2738896..2741520 | + | 2625 | WP_003116812.1 | AAA family ATPase | - |
| PALA39_RS13035 (PALA39_02586) | 2741561..2742310 | - | 750 | WP_003105620.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA39_RS13040 (PALA39_02587) | 2742307..2744499 | - | 2193 | WP_003116813.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA39_RS13045 (PALA39_02588) | 2744504..2745052 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| PALA39_RS13050 (PALA39_02589) | 2745049..2745639 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA39_RS13055 (PALA39_02590) | 2745621..2746358 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA39_RS13060 (PALA39_02591) | 2746371..2747015 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| PALA39_RS13065 (PALA39_02592) | 2747012..2747611 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| PALA39_RS13070 (PALA39_02593) | 2747750..2750029 | - | 2280 | WP_003098893.1 | helicase-related protein | - |
| PALA39_RS13075 (PALA39_02594) | 2750166..2750471 | - | 306 | WP_003098895.1 | hypothetical protein | - |
| PALA39_RS13080 (PALA39_02595) | 2750561..2750881 | - | 321 | WP_003098896.1 | hypothetical protein | - |
| PALA39_RS13085 (PALA39_02596) | 2750932..2752041 | - | 1110 | WP_003098899.1 | DUF6094 domain-containing protein | - |
| PALA39_RS13090 (PALA39_02597) | 2752106..2752753 | - | 648 | WP_003098901.1 | hypothetical protein | - |
| PALA39_RS13095 (PALA39_02598) | 2752830..2753090 | - | 261 | WP_003098905.1 | hypothetical protein | - |
| PALA39_RS13100 (PALA39_02599) | 2753107..2753514 | - | 408 | WP_003098908.1 | hypothetical protein | - |
| PALA39_RS13105 | 2753621..2753959 | - | 339 | Protein_2588 | hypothetical protein | - |
| PALA39_RS13110 (PALA39_02601) | 2754054..2754743 | - | 690 | WP_003098913.1 | DUF3275 family protein | - |
| PALA39_RS13115 (PALA39_02602) | 2754838..2755665 | - | 828 | WP_003098915.1 | DUF932 domain-containing protein | - |
| PALA39_RS13120 (PALA39_02603) | 2755811..2756716 | - | 906 | WP_003098919.1 | DUF3577 domain-containing protein | - |
| PALA39_RS13125 | 2757027..2757311 | - | 285 | WP_003098923.1 | hypothetical protein | - |
| PALA39_RS13130 (PALA39_02605) | 2757619..2757903 | - | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| PALA39_RS13135 | 2757949..2758940 | - | 992 | Protein_2594 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PALA39_RS13140 (PALA39_02607) | 2758965..2760653 | - | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| PALA39_RS13145 (PALA39_02608) | 2760664..2760969 | - | 306 | WP_003098934.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA39_RS13150 (PALA39_02609) | 2760982..2761332 | - | 351 | WP_003098936.1 | mercuric ion transporter MerT | - |
| PALA39_RS13155 (PALA39_02610) | 2761404..2761811 | + | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| PALA39_RS13160 (PALA39_02612) | 2762073..2762897 | - | 825 | WP_003098941.1 | hypothetical protein | - |
| PALA39_RS13165 (PALA39_02613) | 2763186..2763464 | - | 279 | WP_031636951.1 | hypothetical protein | - |
| PALA39_RS13170 (PALA39_02614) | 2763561..2764298 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA39_RS13175 (PALA39_02615) | 2764512..2764904 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA39_RS13180 (PALA39_02616) | 2764926..2765177 | - | 252 | WP_005408894.1 | hypothetical protein | - |
| PALA39_RS13185 | 2765476..2765781 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA39_RS13190 (PALA39_02617) | 2766124..2766624 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA39_RS13195 (PALA39_02618) | 2766628..2769540 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA39_RS13200 (PALA39_02619) | 2769632..2770030 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA39_RS13205 | 2770485..2770688 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA39_RS13210 (PALA39_02620) | 2771106..2771741 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA39_RS13215 | 2772484..2772618 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA39_RS13220 (PALA39_02621) | 2772558..2774495 | - | 1938 | Protein_2611 | DNA topoisomerase III | - |
| PALA39_RS13225 (PALA39_02622) | 2774779..2775219 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA39_RS13230 (PALA39_02623) | 2775293..2775820 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA39_RS13235 (PALA39_02624) | 2775817..2776608 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA39_RS13240 (PALA39_02625) | 2777038..2778276 | - | 1239 | WP_005408896.1 | STY4528 family pathogenicity island replication protein | - |
| PALA39_RS13245 (PALA39_02626) | 2778280..2778840 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA39_RS13250 (PALA39_02627) | 2778855..2780534 | - | 1680 | WP_003098985.1 | ParB family protein | - |
| PALA39_RS13255 (PALA39_02628) | 2780527..2780796 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA39_RS13260 (PALA39_02629) | 2780780..2781655 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA39_RS13265 (PALA39_02630) | 2781698..2781910 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA39_RS13270 (PALA39_02631) | 2782029..2782775 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA39_RS13275 (PALA39_02632) | 2783226..2783726 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA39_RS13285 (PALA39_02634) | 2784518..2786461 | + | 1944 | WP_009876631.1 | tyrosine-type recombinase/integrase | - |
| PALA39_RS13290 (PALA39_02635) | 2786499..2787383 | - | 885 | WP_009876630.1 | Dyp-type peroxidase | - |
| PALA39_RS13295 (PALA39_02636) | 2787586..2788239 | - | 654 | WP_023106332.1 | substrate-binding domain-containing protein | - |
| PALA39_RS13300 | 2788359..2788652 | + | 294 | WP_009459591.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|