MGE detailed information
MGE type: Prophage MGE length: 46723 bp
Accession: NZ_CP109897 Location: 1294193..1340915 Organism: Xylella fastidiosa subsp. fastidiosa strain XYL461 Replicon: chromosome
Accession: NZ_CP109897 Location: 1294193..1340915 Organism: Xylella fastidiosa subsp. fastidiosa strain XYL461 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK116_RS06010 (OK116_06010) | 1289521..1290306 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OK116_RS06015 (OK116_06015) | 1290343..1292949 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| OK116_RS06020 (OK116_06020) | 1293382..1294113 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OK116_RS06025 (OK116_06025) | 1294193..1295053 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| OK116_RS06030 (OK116_06030) | 1295207..1296076 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| OK116_RS06040 (OK116_06040) | 1296849..1297193 | - | 345 | WP_004084923.1 | RidA family protein | - |
| OK116_RS06045 (OK116_06045) | 1297396..1297671 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| OK116_RS06050 (OK116_06050) | 1297920..1299002 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| OK116_RS06055 (OK116_06055) | 1298993..1299211 | - | 219 | WP_004088371.1 | tail protein X | - |
| OK116_RS06060 (OK116_06060) | 1299208..1299690 | - | 483 | WP_011097928.1 | phage tail protein | - |
| OK116_RS06065 (OK116_06065) | 1299687..1301942 | - | 2256 | WP_228446139.1 | phage tail tape measure protein | - |
| OK116_RS06070 (OK116_06070) | 1302033..1302320 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| OK116_RS06075 (OK116_06075) | 1302323..1302832 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| OK116_RS06080 (OK116_06080) | 1302832..1304010 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| OK116_RS06085 (OK116_06085) | 1304075..1305667 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| OK116_RS06090 (OK116_06090) | 1305675..1306232 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK116_RS06095 (OK116_06095) | 1306225..1307118 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK116_RS06100 (OK116_06100) | 1307118..1307480 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK116_RS06105 (OK116_06105) | 1307606..1307869 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OK116_RS06110 (OK116_06110) | 1307856..1308137 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| OK116_RS06115 (OK116_06115) | 1308174..1308761 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| OK116_RS06120 (OK116_06120) | 1308758..1309300 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK116_RS06125 (OK116_06125) | 1309276..1309797 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| OK116_RS06130 (OK116_06130) | 1309794..1310117 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| OK116_RS06135 (OK116_06135) | 1310117..1310377 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| OK116_RS06140 (OK116_06140) | 1310395..1312269 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| OK116_RS06145 (OK116_06145) | 1312266..1313852 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| OK116_RS06150 (OK116_06150) | 1313849..1314400 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| OK116_RS06155 (OK116_06155) | 1314404..1316356 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| OK116_RS06160 (OK116_06160) | 1316349..1316882 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| OK116_RS06165 (OK116_06165) | 1317055..1317279 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| OK116_RS06170 (OK116_06170) | 1317281..1317742 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| OK116_RS06175 (OK116_06175) | 1317732..1318061 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| OK116_RS06180 (OK116_06180) | 1318054..1318548 | - | 495 | WP_011097941.1 | lysozyme | - |
| OK116_RS06185 (OK116_06185) | 1318515..1319132 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| OK116_RS06190 (OK116_06190) | 1319551..1322082 | - | 2532 | WP_012382624.1 | phage/plasmid primase, P4 family | - |
| OK116_RS06195 (OK116_06195) | 1322218..1322784 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| OK116_RS06200 (OK116_06200) | 1322781..1323167 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| OK116_RS06205 (OK116_06205) | 1323164..1323550 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| OK116_RS06210 (OK116_06210) | 1323547..1323933 | - | 387 | WP_011097947.1 | phage antirepressor | - |
| OK116_RS06215 (OK116_06215) | 1323930..1324316 | - | 387 | WP_012382625.1 | phage antirepressor | - |
| OK116_RS06220 (OK116_06220) | 1324313..1324576 | - | 264 | WP_228446140.1 | hypothetical protein | - |
| OK116_RS06225 (OK116_06225) | 1324801..1325046 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| OK116_RS06230 (OK116_06230) | 1325107..1325322 | - | 216 | WP_012382628.1 | hypothetical protein | - |
| OK116_RS06235 (OK116_06235) | 1325352..1325540 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| OK116_RS06240 (OK116_06240) | 1325594..1325770 | - | 177 | WP_174851808.1 | hypothetical protein | - |
| OK116_RS06245 | 1325811..1326257 | + | 447 | WP_206685569.1 | hypothetical protein | - |
| OK116_RS06250 (OK116_06245) | 1326150..1326410 | - | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| OK116_RS06255 (OK116_06250) | 1326496..1327254 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| OK116_RS06260 (OK116_06255) | 1327415..1327954 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| OK116_RS06265 (OK116_06260) | 1327977..1328186 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| OK116_RS06270 (OK116_06265) | 1328183..1328623 | + | 441 | WP_011097954.1 | hypothetical protein | - |
| OK116_RS06275 (OK116_06270) | 1328841..1329230 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| OK116_RS06280 (OK116_06275) | 1329227..1329691 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| OK116_RS06285 (OK116_06280) | 1329748..1330338 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| OK116_RS06290 (OK116_06285) | 1330530..1330721 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| OK116_RS06295 (OK116_06290) | 1330745..1330936 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| OK116_RS06300 (OK116_06295) | 1330968..1331165 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| OK116_RS06305 (OK116_06300) | 1331152..1331649 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| OK116_RS06310 (OK116_06305) | 1331646..1332923 | + | 1278 | WP_011097959.1 | DUF2800 domain-containing protein | - |
| OK116_RS06315 (OK116_06310) | 1332923..1333489 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| OK116_RS06320 (OK116_06315) | 1333480..1335087 | + | 1608 | WP_012382638.1 | BRO family protein | - |
| OK116_RS06325 (OK116_06320) | 1335089..1337269 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| OK116_RS06330 (OK116_06325) | 1337266..1337544 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| OK116_RS06335 (OK116_06330) | 1337546..1337992 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| OK116_RS06340 (OK116_06335) | 1338077..1339495 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| OK116_RS06345 (OK116_06340) | 1339492..1339656 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| OK116_RS06350 (OK116_06345) | 1339649..1339906 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| OK116_RS06355 (OK116_06350) | 1339896..1340915 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK116_RS06360 (OK116_06355) | 1341279..1343870 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|