MGE detailed information
MGE type: Prophage MGE length: 22834 bp
Accession: NZ_CP109894 Location: 445903..468736 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8351 Replicon: chromosome
Accession: NZ_CP109894 Location: 445903..468736 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8351 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK118_RS01815 (OK118_01815) | 441275..443065 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| OK118_RS01820 (OK118_01820) | 443086..443871 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| OK118_RS01825 (OK118_01825) | 443992..444240 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| OK118_RS01830 (OK118_01830) | 444263..444643 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| OK118_RS01835 (OK118_01835) | 444669..445910 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| OK118_RS01840 (OK118_01840) | 445903..446625 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| OK118_RS01845 (OK118_01845) | 446973..449450 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| OK118_RS01850 (OK118_01850) | 449435..450097 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| OK118_RS01855 (OK118_01855) | 450102..450539 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| OK118_RS01860 (OK118_01860) | 450557..452305 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| OK118_RS01865 (OK118_01865) | 452302..453321 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| OK118_RS01870 (OK118_01870) | 453728..454417 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| OK118_RS01875 (OK118_01875) | 454347..455318 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| OK118_RS01880 (OK118_01880) | 455326..455883 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK118_RS01885 (OK118_01885) | 455876..456769 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK118_RS01890 (OK118_01890) | 456769..457131 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK118_RS01895 (OK118_01895) | 457305..457586 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK118_RS01900 (OK118_01900) | 457597..457872 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OK118_RS01905 (OK118_01905) | 457960..458262 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| OK118_RS01910 (OK118_01910) | 458265..458666 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| OK118_RS01915 (OK118_01915) | 458735..459322 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| OK118_RS01920 (OK118_01920) | 459319..459861 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK118_RS01925 (OK118_01925) | 459837..460358 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| OK118_RS01930 (OK118_01930) | 460355..460678 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| OK118_RS01935 (OK118_01935) | 460678..460938 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| OK118_RS01940 (OK118_01940) | 460956..462830 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| OK118_RS01945 (OK118_01945) | 462827..463459 | - | 633 | WP_011097618.1 | phage portal protein | - |
| OK118_RS01950 (OK118_01950) | 463456..463686 | - | 231 | WP_228446163.1 | hypothetical protein | - |
| OK118_RS01955 (OK118_01955) | 463675..463974 | + | 300 | WP_228446164.1 | hypothetical protein | - |
| OK118_RS01960 (OK118_01960) | 463971..464249 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| OK118_RS01965 (OK118_01965) | 464251..464559 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| OK118_RS01970 (OK118_01970) | 464644..466062 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| OK118_RS01975 (OK118_01975) | 466059..466313 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| OK118_RS01980 (OK118_01980) | 466303..467322 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK118_RS01985 (OK118_01985) | 468095..468736 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| OK118_RS01990 (OK118_01990) | 468764..469240 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| OK118_RS01995 (OK118_01995) | 469245..469817 | + | 573 | WP_011097627.1 | YceI family protein | - |
| OK118_RS02000 (OK118_02000) | 469814..471772 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| OK118_RS02005 (OK118_02005) | 472705..473094 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|