MGE detailed information
MGE type: Prophage MGE length: 46762 bp
Accession: NZ_CP109891 Location: 1527285..1574046 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Accession: NZ_CP109891 Location: 1527285..1574046 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK113_RS06890 (OK113_06890) | 1523574..1524284 | + | 711 | WP_004088272.1 | epoxyqueuosine reductase QueH | - |
| OK113_RS06895 (OK113_06895) | 1524318..1524944 | + | 627 | WP_004088271.1 | nicotinamidase | - |
| OK113_RS06900 (OK113_06900) | 1525019..1526665 | - | 1647 | WP_004088270.1 | fatty acid CoA ligase family protein | - |
| OK113_RS06905 (OK113_06905) | 1526959..1527267 | - | 309 | WP_012382664.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| OK113_RS06910 (OK113_06910) | 1527285..1528007 | - | 723 | WP_004088269.1 | glycosyltransferase | - |
| OK113_RS06915 (OK113_06915) | 1528046..1529017 | - | 972 | WP_004088268.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| OK113_RS06920 (OK113_06920) | 1529324..1530256 | - | 933 | WP_004088267.1 | ParB/RepB/Spo0J family partition protein | - |
| OK113_RS06925 (OK113_06925) | 1530256..1531050 | - | 795 | WP_004088266.1 | Sporulation initiation inhibitor protein Soj | VF |
| OK113_RS06930 (OK113_06930) | 1531349..1532302 | - | 954 | WP_011098046.1 | MBL fold metallo-hydrolase | - |
| OK113_RS06935 (OK113_06935) | 1533103..1534383 | - | 1281 | WP_004088264.1 | serine--tRNA ligase | - |
| OK113_RS06940 (OK113_06940) | 1534505..1535200 | + | 696 | WP_004088263.1 | energy transducer TonB | - |
| OK113_RS06945 (OK113_06945) | 1535477..1535866 | - | 390 | WP_225621729.1 | hypothetical protein ; Integrase | Integrase |
| OK113_RS06950 (OK113_06950) | 1535808..1536518 | - | 711 | WP_004088262.1 | hypothetical protein ; Integrase | Integrase |
| OK113_RS06955 (OK113_06955) | 1536530..1536721 | - | 192 | WP_014607356.1 | DUF4224 domain-containing protein | - |
| OK113_RS06960 (OK113_06960) | 1536693..1536839 | - | 147 | WP_228762609.1 | DUF4224 domain-containing protein | - |
| OK113_RS06965 (OK113_06965) | 1536836..1537067 | - | 232 | Protein_1355 | hypothetical protein | - |
| OK113_RS06970 (OK113_06970) | 1537383..1538204 | + | 822 | WP_228446183.1 | DNA polymerase | - |
| OK113_RS06975 (OK113_06975) | 1538134..1538487 | - | 354 | Protein_1357 | lysozyme | - |
| OK113_RS06980 (OK113_06980) | 1538401..1538583 | + | 183 | WP_228446185.1 | hypothetical protein | - |
| OK113_RS06985 (OK113_06985) | 1538621..1539352 | - | 732 | WP_004089563.1 | site-specific DNA-methyltransferase | - |
| OK113_RS06990 (OK113_06990) | 1539597..1539752 | - | 156 | WP_155115072.1 | hypothetical protein | - |
| OK113_RS06995 (OK113_06995) | 1540041..1541906 | + | 1866 | WP_004089558.1 | excinuclease ABC subunit UvrC | - |
| OK113_RS07000 (OK113_07000) | 1541903..1542532 | + | 630 | WP_004089556.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| OK113_RS07010 (OK113_07010) | 1543283..1543741 | - | 459 | WP_011098051.1 | hypothetical protein | - |
| OK113_RS07015 (OK113_07015) | 1543950..1544447 | - | 498 | WP_011098052.1 | hypothetical protein | - |
| OK113_RS07020 (OK113_07020) | 1545052..1546056 | + | 1005 | WP_004089540.1 | porphobilinogen synthase | - |
| OK113_RS07025 (OK113_07025) | 1546620..1547003 | - | 384 | WP_004089538.1 | VOC family protein | - |
| OK113_RS07030 (OK113_07030) | 1547154..1547531 | - | 378 | WP_038233122.1 | DUF2913 family protein | - |
| OK113_RS07035 (OK113_07035) | 1547531..1548234 | + | 704 | Protein_1368 | IS6 family transposase ISEas1 | Transposase |
| OK113_RS07040 (OK113_07040) | 1548366..1549700 | + | 1335 | WP_004089531.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| OK113_RS07045 (OK113_07045) | 1549796..1550707 | - | 912 | WP_004089529.1 | iron-sulfur cluster carrier protein ApbC | - |
| OK113_RS07050 (OK113_07050) | 1551142..1551915 | + | 774 | WP_004089528.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| OK113_RS07055 (OK113_07055) | 1551912..1552376 | + | 465 | WP_011098056.1 | Putative low molecular weight protein-tyrosine-phosphatase | VF |
| OK113_RS07060 (OK113_07060) | 1552363..1553076 | - | 714 | WP_011098057.1 | site-specific DNA-methyltransferase | - |
| OK113_RS07065 (OK113_07065) | 1553427..1553708 | + | 282 | WP_011098058.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OK113_RS07070 (OK113_07070) | 1553718..1554017 | + | 300 | WP_004089519.1 | HigA family addiction module antitoxin | - |
| OK113_RS07075 (OK113_07075) | 1554197..1554532 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OK113_RS07080 (OK113_07080) | 1554529..1554783 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OK113_RS07085 (OK113_07085) | 1554836..1555534 | - | 699 | WP_011098059.1 | hypothetical protein | - |
| OK113_RS07090 (OK113_07090) | 1555663..1556124 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| OK113_RS07095 (OK113_07095) | 1556121..1556810 | - | 690 | WP_011098061.1 | hypothetical protein | - |
| OK113_RS07100 (OK113_07100) | 1556791..1557890 | - | 1100 | Protein_1381 | YdaU family protein | - |
| OK113_RS07105 (OK113_07105) | 1557887..1558132 | - | 246 | WP_225621698.1 | hypothetical protein | - |
| OK113_RS07110 (OK113_07110) | 1558288..1558662 | + | 375 | WP_004091110.1 | conjugal transfer protein | - |
| OK113_RS07115 (OK113_07115) | 1558668..1559273 | + | 606 | WP_004091108.1 | hypothetical protein | VF |
| OK113_RS07120 (OK113_07120) | 1559974..1560258 | + | 285 | WP_228762611.1 | hypothetical protein | - |
| OK113_RS07125 (OK113_07125) | 1560260..1560937 | + | 678 | WP_004091097.1 | hypothetical protein | - |
| OK113_RS07130 (OK113_07130) | 1561173..1561367 | + | 195 | WP_014607363.1 | hypothetical protein | - |
| OK113_RS07135 (OK113_07135) | 1561609..1561869 | + | 261 | WP_014607365.1 | hypothetical protein | - |
| OK113_RS07140 (OK113_07140) | 1562384..1562626 | - | 243 | WP_012382667.1 | hypothetical protein | - |
| OK113_RS07145 (OK113_07145) | 1563472..1564800 | - | 1329 | WP_038233126.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| OK113_RS07150 (OK113_07150) | 1564889..1566013 | - | 1125 | WP_004091077.1 | prephenate dehydratase | - |
| OK113_RS07155 (OK113_07155) | 1566093..1567181 | - | 1089 | WP_011098070.1 | phosphoserine transaminase | - |
| OK113_RS07160 (OK113_07160) | 1567843..1568958 | + | 1116 | WP_012382668.1 | energy transducer TonB | - |
| OK113_RS07165 (OK113_07165) | 1568985..1570169 | - | 1185 | WP_011098072.1 | ABC transporter permease | - |
| OK113_RS07170 (OK113_07170) | 1570166..1570912 | - | 747 | WP_004091068.1 | ABC transporter ATP-binding protein NatA | VF |
| OK113_RS07175 (OK113_07175) | 1570909..1572444 | - | 1536 | WP_004091066.1 | alpha/beta hydrolase | - |
| OK113_RS07180 (OK113_07180) | 1572643..1573143 | - | 501 | WP_004091064.1 | dihydrofolate reductase | - |
| OK113_RS07185 (OK113_07185) | 1573252..1574046 | - | 795 | WP_011098074.1 | thymidylate synthase | - |
| OK113_RS07190 (OK113_07190) | 1574043..1574948 | - | 906 | WP_004091059.1 | prolipoprotein diacylglyceryl transferase | - |
| OK113_RS07195 (OK113_07195) | 1575035..1575415 | - | 381 | WP_004091057.1 | diacylglycerol kinase | - |
| OK113_RS07200 (OK113_07200) | 1575710..1576423 | - | 714 | WP_004085858.1 | response regulator transcription factor | - |
| OK113_RS07205 (OK113_07205) | 1576903..1578024 | - | 1122 | WP_011098075.1 | prephenate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|