MGE detailed information
MGE type: Prophage MGE length: 46812 bp
Accession: NZ_CP109891 Location: 1262730..1309541 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Accession: NZ_CP109891 Location: 1262730..1309541 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK113_RS05600 (OK113_05600) | 1258058..1258843 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OK113_RS05605 (OK113_05605) | 1258880..1261486 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| OK113_RS05610 (OK113_05610) | 1261919..1262650 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OK113_RS05615 (OK113_05615) | 1262730..1263590 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| OK113_RS05620 (OK113_05620) | 1263744..1264613 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| OK113_RS05630 (OK113_05630) | 1265386..1265730 | - | 345 | WP_004084923.1 | RidA family protein | - |
| OK113_RS05635 (OK113_05635) | 1265933..1266208 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| OK113_RS05640 (OK113_05640) | 1266457..1267539 | - | 1083 | WP_014607781.1 | phage late control D family protein | - |
| OK113_RS05645 (OK113_05645) | 1267530..1267748 | - | 219 | WP_004088371.1 | tail protein X | - |
| OK113_RS05650 (OK113_05650) | 1267745..1268227 | - | 483 | WP_011097928.1 | phage tail protein | - |
| OK113_RS05655 (OK113_05655) | 1268224..1270479 | - | 2256 | WP_241547255.1 | phage tail tape measure protein | - |
| OK113_RS05660 (OK113_05660) | 1270570..1270857 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| OK113_RS05665 (OK113_05665) | 1270860..1271369 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| OK113_RS05670 (OK113_05670) | 1271369..1272547 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| OK113_RS05675 (OK113_05675) | 1272612..1274204 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| OK113_RS05680 (OK113_05680) | 1274212..1274769 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK113_RS05685 (OK113_05685) | 1274762..1275655 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK113_RS05690 (OK113_05690) | 1275655..1276017 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK113_RS05695 (OK113_05695) | 1276143..1276406 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OK113_RS05700 (OK113_05700) | 1276393..1276674 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| OK113_RS05705 (OK113_05705) | 1276711..1277298 | - | 588 | WP_004090703.1 | phage baseplate assembly protein V | - |
| OK113_RS05710 (OK113_05710) | 1277295..1277837 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK113_RS05715 (OK113_05715) | 1277813..1278334 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| OK113_RS05720 (OK113_05720) | 1278331..1278654 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| OK113_RS05725 (OK113_05725) | 1278654..1278914 | - | 261 | WP_038232801.1 | hypothetical protein | - |
| OK113_RS05730 (OK113_05730) | 1278932..1280806 | - | 1875 | WP_038232803.1 | phage major capsid protein | - |
| OK113_RS05735 (OK113_05735) | 1280790..1282388 | - | 1599 | WP_167405116.1 | phage portal protein | - |
| OK113_RS05740 (OK113_05740) | 1282385..1282936 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| OK113_RS05745 (OK113_05745) | 1282940..1284892 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| OK113_RS05750 (OK113_05750) | 1284885..1285418 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| OK113_RS05755 (OK113_05755) | 1285591..1285815 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| OK113_RS05760 (OK113_05760) | 1285817..1286278 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| OK113_RS05765 (OK113_05765) | 1286268..1286597 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| OK113_RS05770 (OK113_05770) | 1286590..1287084 | - | 495 | WP_011097941.1 | lysozyme | - |
| OK113_RS05775 (OK113_05775) | 1287051..1287668 | - | 618 | WP_128723203.1 | hypothetical protein | - |
| OK113_RS05780 (OK113_05780) | 1288114..1288359 | - | 246 | WP_169317858.1 | hypothetical protein | - |
| OK113_RS05785 (OK113_05785) | 1288478..1291015 | - | 2538 | WP_272155393.1 | phage/plasmid primase, P4 family | - |
| OK113_RS05790 (OK113_05790) | 1291151..1291744 | - | 594 | WP_140161952.1 | Bro-N domain-containing protein | - |
| OK113_RS05795 (OK113_05795) | 1291755..1292126 | - | 372 | WP_272155394.1 | phage antirepressor protein | - |
| OK113_RS05800 (OK113_05800) | 1292420..1292686 | - | 267 | WP_241547262.1 | hypothetical protein | - |
| OK113_RS05805 (OK113_05805) | 1292704..1292919 | - | 216 | WP_234056304.1 | hypothetical protein | - |
| OK113_RS05810 (OK113_05810) | 1292949..1293137 | - | 189 | WP_004085135.1 | hypothetical protein | - |
| OK113_RS05815 (OK113_05815) | 1293191..1293367 | - | 177 | WP_174851808.1 | hypothetical protein | - |
| OK113_RS05820 (OK113_05820) | 1293517..1293822 | + | 306 | WP_038230427.1 | hypothetical protein | - |
| OK113_RS05825 (OK113_05825) | 1293819..1294031 | - | 213 | WP_046419181.1 | hypothetical protein | - |
| OK113_RS05830 (OK113_05830) | 1294107..1294781 | + | 675 | WP_004086872.1 | helix-turn-helix transcriptional regulator | - |
| OK113_RS05835 (OK113_05835) | 1294827..1295267 | - | 441 | WP_011097954.1 | hypothetical protein | - |
| OK113_RS05840 (OK113_05840) | 1295264..1295473 | - | 210 | WP_012382632.1 | hypothetical protein | - |
| OK113_RS05845 (OK113_05845) | 1295496..1296014 | - | 519 | WP_128723202.1 | hypothetical protein | - |
| OK113_RS05850 (OK113_05850) | 1296284..1296721 | - | 438 | WP_241547256.1 | hypothetical protein | - |
| OK113_RS05855 (OK113_05855) | 1296811..1297344 | + | 534 | WP_071869852.1 | hypothetical protein | - |
| OK113_RS05860 (OK113_05860) | 1297341..1297856 | + | 516 | WP_071869851.1 | hypothetical protein | - |
| OK113_RS05865 (OK113_05865) | 1297853..1298314 | + | 462 | WP_072866385.1 | DUF1566 domain-containing protein | - |
| OK113_RS05870 (OK113_05870) | 1298374..1298964 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| OK113_RS05875 (OK113_05875) | 1299156..1299347 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| OK113_RS05880 (OK113_05880) | 1299371..1299562 | + | 192 | WP_038233160.1 | hypothetical protein | - |
| OK113_RS05885 (OK113_05885) | 1299594..1299788 | + | 195 | WP_004086187.1 | hypothetical protein | - |
| OK113_RS05890 (OK113_05890) | 1299778..1300275 | + | 498 | WP_167405117.1 | hypothetical protein | - |
| OK113_RS05895 (OK113_05895) | 1300272..1301549 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| OK113_RS05900 (OK113_05900) | 1301549..1302115 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| OK113_RS05905 (OK113_05905) | 1302202..1303713 | + | 1512 | WP_011097960.1 | BRO family protein | - |
| OK113_RS05910 (OK113_05910) | 1303715..1305895 | + | 2181 | WP_272155395.1 | DNA polymerase | - |
| OK113_RS05915 (OK113_05915) | 1305895..1306170 | + | 276 | WP_012382732.1 | VRR-NUC domain-containing protein | - |
| OK113_RS05920 (OK113_05920) | 1306172..1306618 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| OK113_RS05925 (OK113_05925) | 1306703..1308121 | + | 1419 | WP_038233072.1 | DEAD/DEAH box helicase | - |
| OK113_RS05930 (OK113_05930) | 1308118..1308282 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| OK113_RS05935 (OK113_05935) | 1308275..1308532 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| OK113_RS05940 (OK113_05940) | 1308522..1309541 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK113_RS05945 (OK113_05945) | 1309905..1312496 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|