MGE detailed information
MGE type: Prophage MGE length: 23914 bp
Accession: NZ_CP109890 Location: 445904..469817 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Accession: NZ_CP109890 Location: 445904..469817 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK119_RS01825 (OK119_01825) | 441276..443066 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| OK119_RS01830 (OK119_01830) | 443087..443872 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| OK119_RS01835 (OK119_01835) | 443993..444241 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| OK119_RS01840 (OK119_01840) | 444264..444644 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| OK119_RS01845 (OK119_01845) | 444670..445911 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| OK119_RS01850 (OK119_01850) | 445904..446626 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| OK119_RS01855 (OK119_01855) | 446974..449451 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| OK119_RS01860 (OK119_01860) | 449436..450098 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| OK119_RS01865 (OK119_01865) | 450103..450540 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| OK119_RS01870 (OK119_01870) | 450558..452306 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| OK119_RS01875 (OK119_01875) | 452303..453322 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| OK119_RS01880 (OK119_01880) | 453729..454418 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| OK119_RS01885 (OK119_01885) | 454348..455319 | - | 972 | WP_159241593.1 | hypothetical protein | - |
| OK119_RS01890 (OK119_01890) | 455327..455884 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| OK119_RS01895 (OK119_01895) | 455877..456770 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK119_RS01900 (OK119_01900) | 456770..457132 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK119_RS01905 (OK119_01905) | 457306..457587 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK119_RS01910 (OK119_01910) | 457598..457873 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OK119_RS01915 (OK119_01915) | 457961..458263 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| OK119_RS01920 (OK119_01920) | 458266..458667 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| OK119_RS01925 (OK119_01925) | 458736..459323 | - | 588 | WP_004090703.1 | phage baseplate assembly protein V | - |
| OK119_RS01930 (OK119_01930) | 459320..459862 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK119_RS01935 (OK119_01935) | 459838..460359 | - | 522 | WP_057683415.1 | hypothetical protein | - |
| OK119_RS01940 (OK119_01940) | 460356..460679 | - | 324 | WP_038233035.1 | hypothetical protein | - |
| OK119_RS01945 (OK119_01945) | 460679..460939 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| OK119_RS01950 (OK119_01950) | 460957..462831 | - | 1875 | WP_140161485.1 | phage major capsid protein | - |
| OK119_RS01955 (OK119_01955) | 462815..463459 | - | 645 | WP_038232805.1 | phage portal protein | - |
| OK119_RS01960 (OK119_01960) | 463423..463974 | + | 552 | WP_052076489.1 | hypothetical protein | - |
| OK119_RS01965 (OK119_01965) | 463971..464249 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| OK119_RS01970 (OK119_01970) | 464251..464559 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| OK119_RS01975 (OK119_01975) | 464644..466062 | + | 1419 | WP_126709119.1 | DEAD/DEAH box helicase | - |
| OK119_RS01980 (OK119_01980) | 466059..466313 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| OK119_RS01985 (OK119_01985) | 466303..467322 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK119_RS01990 (OK119_01990) | 468095..468736 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| OK119_RS01995 (OK119_01995) | 468764..469240 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| OK119_RS02000 (OK119_02000) | 469245..469817 | + | 573 | WP_011097627.1 | YceI family protein | - |
| OK119_RS02005 (OK119_02005) | 469814..471772 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| OK119_RS02010 (OK119_02010) | 472413..472535 | + | 123 | WP_260473230.1 | hypothetical protein | - |
| OK119_RS02015 (OK119_02015) | 472705..473094 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|