MGE detailed information
MGE type: Prophage MGE length: 46208 bp
Accession: NZ_CP109890 Location: 1262235..1308442 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Accession: NZ_CP109890 Location: 1262235..1308442 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK119_RS05620 (OK119_05620) | 1257563..1258348 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OK119_RS05625 (OK119_05625) | 1258385..1260991 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| OK119_RS05630 (OK119_05630) | 1261424..1262155 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OK119_RS05635 (OK119_05635) | 1262235..1263095 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| OK119_RS05640 (OK119_05640) | 1263249..1264118 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| OK119_RS05650 (OK119_05650) | 1264891..1265235 | - | 345 | WP_004084923.1 | RidA family protein | - |
| OK119_RS05655 (OK119_05655) | 1265438..1265713 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| OK119_RS05660 (OK119_05660) | 1265962..1267044 | - | 1083 | WP_014607781.1 | phage late control D family protein | - |
| OK119_RS05665 (OK119_05665) | 1267035..1267253 | - | 219 | WP_004088371.1 | tail protein X | - |
| OK119_RS05670 (OK119_05670) | 1267250..1267732 | - | 483 | WP_011097928.1 | phage tail protein | - |
| OK119_RS05675 (OK119_05675) | 1267729..1269984 | - | 2256 | WP_241547255.1 | phage tail tape measure protein | - |
| OK119_RS05680 (OK119_05680) | 1270075..1270362 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| OK119_RS05685 (OK119_05685) | 1270365..1270874 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| OK119_RS05690 (OK119_05690) | 1270874..1272052 | - | 1179 | WP_128734780.1 | phage tail sheath family protein | - |
| OK119_RS05695 (OK119_05695) | 1272117..1273709 | - | 1593 | WP_159241645.1 | hypothetical protein | - |
| OK119_RS05700 (OK119_05700) | 1273717..1274274 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| OK119_RS05705 (OK119_05705) | 1274267..1275160 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| OK119_RS05710 (OK119_05710) | 1275160..1275522 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| OK119_RS05715 (OK119_05715) | 1275648..1275911 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| OK119_RS05720 (OK119_05720) | 1275898..1276179 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| OK119_RS05725 (OK119_05725) | 1276216..1276803 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| OK119_RS05730 (OK119_05730) | 1276800..1277342 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| OK119_RS05735 (OK119_05735) | 1277318..1277839 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| OK119_RS05740 (OK119_05740) | 1277836..1278159 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| OK119_RS05745 (OK119_05745) | 1278159..1278419 | - | 261 | WP_038232801.1 | hypothetical protein | - |
| OK119_RS05750 (OK119_05750) | 1278437..1280311 | - | 1875 | WP_140161278.1 | phage major capsid protein | - |
| OK119_RS05755 (OK119_05755) | 1280308..1281894 | - | 1587 | WP_140161862.1 | phage portal protein | - |
| OK119_RS05760 (OK119_05760) | 1281891..1282442 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| OK119_RS05765 (OK119_05765) | 1282446..1284398 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| OK119_RS05770 (OK119_05770) | 1284391..1284924 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| OK119_RS05775 (OK119_05775) | 1285097..1285321 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| OK119_RS05780 (OK119_05780) | 1285323..1285784 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| OK119_RS05785 (OK119_05785) | 1285774..1286103 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| OK119_RS05790 (OK119_05790) | 1286096..1286590 | - | 495 | WP_011097941.1 | lysozyme | - |
| OK119_RS05795 (OK119_05795) | 1286557..1287174 | - | 618 | WP_128723203.1 | hypothetical protein | - |
| OK119_RS05800 (OK119_05800) | 1287588..1287827 | - | 240 | WP_272154487.1 | hypothetical protein | - |
| OK119_RS05805 (OK119_05805) | 1287946..1288149 | - | 204 | WP_038230413.1 | hypothetical protein | - |
| OK119_RS05810 (OK119_05810) | 1288448..1290994 | - | 2547 | WP_140161264.1 | phage/plasmid primase, P4 family | - |
| OK119_RS05815 (OK119_05815) | 1291130..1291723 | - | 594 | WP_140161265.1 | BRO family protein | - |
| OK119_RS05820 (OK119_05820) | 1291720..1292106 | - | 387 | WP_160176389.1 | phage antirepressor protein | - |
| OK119_RS05825 (OK119_05825) | 1292103..1292366 | - | 264 | WP_260618763.1 | hypothetical protein | - |
| OK119_RS05830 (OK119_05830) | 1292384..1292599 | - | 216 | WP_262363393.1 | hypothetical protein | - |
| OK119_RS05835 (OK119_05835) | 1292629..1292817 | - | 189 | WP_004085135.1 | hypothetical protein | - |
| OK119_RS05840 (OK119_05840) | 1292871..1293116 | - | 246 | WP_272154488.1 | hypothetical protein | - |
| OK119_RS05845 (OK119_05845) | 1293499..1293759 | - | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| OK119_RS05850 (OK119_05850) | 1293845..1294603 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| OK119_RS05855 (OK119_05855) | 1294764..1295303 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| OK119_RS05860 (OK119_05860) | 1295326..1295535 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| OK119_RS05865 (OK119_05865) | 1295532..1295972 | + | 441 | WP_011097954.1 | hypothetical protein | - |
| OK119_RS05870 (OK119_05870) | 1296197..1296745 | + | 549 | WP_140161268.1 | hypothetical protein | - |
| OK119_RS05875 (OK119_05875) | 1296742..1297203 | + | 462 | WP_072866385.1 | DUF1566 domain-containing protein | - |
| OK119_RS05880 (OK119_05880) | 1297263..1297853 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| OK119_RS05885 (OK119_05885) | 1298045..1298236 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| OK119_RS05890 (OK119_05890) | 1298260..1298451 | + | 192 | WP_038233160.1 | hypothetical protein | - |
| OK119_RS05895 (OK119_05895) | 1298483..1298680 | + | 198 | WP_140161863.1 | hypothetical protein | - |
| OK119_RS05900 (OK119_05900) | 1298733..1299185 | + | 453 | WP_004090713.1 | hypothetical protein | - |
| OK119_RS05905 (OK119_05905) | 1299182..1300459 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| OK119_RS05910 (OK119_05910) | 1300459..1301025 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| OK119_RS05915 (OK119_05915) | 1301112..1302614 | + | 1503 | WP_187695120.1 | BRO family protein | - |
| OK119_RS05920 (OK119_05920) | 1302616..1304796 | + | 2181 | WP_140161855.1 | DNA polymerase | - |
| OK119_RS05925 (OK119_05925) | 1304793..1305071 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| OK119_RS05930 (OK119_05930) | 1305073..1305519 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| OK119_RS05935 (OK119_05935) | 1305604..1307022 | + | 1419 | WP_038233072.1 | DEAD/DEAH box helicase | - |
| OK119_RS05940 (OK119_05940) | 1307019..1307183 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| OK119_RS05945 (OK119_05945) | 1307176..1307433 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| OK119_RS05950 (OK119_05950) | 1307423..1308442 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK119_RS05955 (OK119_05955) | 1308806..1311397 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|