MGE detailed information
MGE type: IS/Tn MGE length: 222 bp
Accession: NZ_CP109886 Location: 1421698..1421919 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8073 Replicon: chromosome
Accession: NZ_CP109886 Location: 1421698..1421919 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8073 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK117_RS06415 (OK117_06430) | 1416923..1417327 | + | 405 | WP_024748528.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OK117_RS06420 (OK117_06435) | 1417346..1419235 | - | 1890 | WP_057683614.1 | hypothetical protein | - |
| OK117_RS06425 (OK117_06440) | 1419383..1419805 | - | 423 | WP_057683613.1 | putative phage tail assembly chaperone | - |
| OK117_RS06430 (OK117_06445) | 1419802..1420239 | - | 438 | WP_272141507.1 | DUF3277 family protein | - |
| OK117_RS06435 (OK117_06450) | 1420249..1420482 | - | 234 | WP_272141509.1 | DUF3383 family protein | - |
| OK117_RS06440 (OK117_06455) | 1420499..1421377 | - | 879 | WP_081046894.1 | RNA-guided endonuclease TnpB family protein | - |
| OK117_RS06445 (OK117_06460) | 1421543..1421704 | - | 162 | WP_014607806.1 | helix-turn-helix domain-containing protein | - |
| OK117_RS06450 (OK117_06465) | 1421698..1422303 | - | 606 | Protein_1253 | IS607 family transposase | - |
| OK117_RS06455 (OK117_06470) | 1422296..1422913 | + | 618 | WP_272141512.1 | hypothetical protein | - |
| OK117_RS06460 (OK117_06475) | 1422910..1423188 | + | 279 | WP_272141514.1 | VRR-NUC domain-containing protein | - |
| OK117_RS06465 (OK117_06480) | 1423190..1423474 | - | 285 | WP_011098229.1 | DUF1640 domain-containing protein | - |
| OK117_RS06470 (OK117_06485) | 1423559..1424977 | + | 1419 | WP_272141453.1 | DEAD/DEAH box helicase | - |
| OK117_RS06475 (OK117_06490) | 1424974..1425138 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| OK117_RS06480 (OK117_06495) | 1425131..1425388 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| OK117_RS06485 (OK117_06500) | 1425378..1426397 | + | 1020 | WP_272141455.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|