MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 18957 bp
Accession: NZ_CP109886 Location: 1013585..1032541 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8073 Replicon: chromosome
Accession: NZ_CP109886 Location: 1013585..1032541 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8073 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK117_RS04275 (OK117_04275) | 1010449..1010736 | + | 288 | WP_234545886.1 | VRR-NUC domain-containing protein | - |
| OK117_RS04280 (OK117_04280) | 1010774..1011022 | - | 249 | WP_128735171.1 | DUF1640 domain-containing protein | - |
| OK117_RS04285 (OK117_04285) | 1011092..1012516 | + | 1425 | WP_058565016.1 | DEAD/DEAH box helicase | - |
| OK117_RS04290 (OK117_04290) | 1012509..1013264 | + | 756 | WP_058565017.1 | DapH/DapD/GlmU-related protein | - |
| OK117_RS04295 (OK117_04295) | 1013261..1013566 | + | 306 | WP_081046872.1 | DUF4224 domain-containing protein | - |
| OK117_RS04300 (OK117_04300) | 1013585..1014676 | + | 1092 | WP_058565018.1 | hypothetical protein ; Integrase | Integrase |
| OK117_RS04305 | 1014833..1017693 | - | 2861 | Protein_830 | zincin-like metallopeptidase domain-containing protein | - |
| OK117_RS04310 (OK117_04325) | 1017772..1018653 | + | 882 | WP_155561275.1 | hypothetical protein | VF |
| OK117_RS04315 (OK117_04330) | 1018666..1019058 | + | 393 | WP_058565053.1 | TrbC/VirB2 family protein | - |
| OK117_RS04320 (OK117_04335) | 1019061..1019381 | + | 321 | WP_058565054.1 | conjugal transfer protein TrbD | - |
| OK117_RS04325 (OK117_04340) | 1019369..1019539 | + | 171 | WP_020851114.1 | hypothetical protein | - |
| OK117_RS04330 (OK117_04345) | 1019563..1021932 | + | 2370 | WP_233341835.1 | conjugal transfer protein TrbE | - |
| OK117_RS04335 (OK117_04350) | 1021929..1022645 | + | 717 | WP_058565055.1 | conjugal transfer protein TrbF | - |
| OK117_RS04340 (OK117_04355) | 1022665..1023555 | + | 891 | Protein_837 | TrbI/VirB10 family protein | - |
| OK117_RS04345 (OK117_04360) | 1023574..1024359 | + | 786 | WP_046417519.1 | P-type conjugative transfer protein TrbJ | - |
| OK117_RS04350 (OK117_04365) | 1024372..1024686 | + | 315 | WP_155561293.1 | EexN family lipoprotein | - |
| OK117_RS04355 (OK117_04370) | 1024692..1026057 | + | 1366 | Protein_840 | P-type conjugative transfer protein TrbL | - |
| OK117_RS04360 (OK117_04375) | 1026063..1026665 | + | 603 | WP_058565172.1 | hypothetical protein | VF |
| OK117_RS04365 (OK117_04380) | 1027447..1027926 | - | 480 | WP_199276042.1 | GNAT family N-acetyltransferase | Toxin Detail |
| OK117_RS04370 (OK117_04385) | 1027929..1028201 | - | 273 | WP_023908223.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| OK117_RS04375 (OK117_04390) | 1028284..1029012 | - | 729 | WP_081046878.1 | DapH/DapD/GlmU-related protein | - |
| OK117_RS04380 (OK117_04395) | 1029018..1029353 | - | 336 | WP_058565069.1 | hypothetical protein | - |
| OK117_RS04385 (OK117_04400) | 1029992..1030411 | - | 420 | WP_004085763.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| OK117_RS04390 (OK117_04405) | 1030411..1030650 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| OK117_RS04395 (OK117_04410) | 1031048..1032082 | + | 1035 | WP_058565070.1 | hypothetical protein | - |
| OK117_RS04400 (OK117_04415) | 1032188..1032442 | + | 255 | Protein_849 | conjugal transfer protein TrbJ | - |
| OK117_RS04405 (OK117_04420) | 1032395..1032622 | - | 228 | WP_233341840.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| OK117_RS04410 (OK117_04425) | 1032621..1032818 | + | 198 | WP_233341839.1 | hypothetical protein | - |
| OK117_RS04415 (OK117_04430) | 1032866..1033096 | + | 231 | WP_004091411.1 | DUF433 domain-containing protein | - |
| OK117_RS04420 (OK117_04435) | 1033093..1033467 | + | 375 | WP_058565090.1 | DUF5615 family PIN-like protein | - |
| OK117_RS04425 (OK117_04440) | 1033472..1033666 | + | 195 | WP_058565089.1 | hypothetical protein | - |
| OK117_RS04430 (OK117_04445) | 1033657..1034214 | + | 558 | WP_058565088.1 | recombinase family protein | - |
| OK117_RS04435 (OK117_04450) | 1034335..1034967 | + | 633 | WP_058565087.1 | YkgJ family cysteine cluster protein | - |
| OK117_RS04440 (OK117_04455) | 1035161..1035418 | - | 258 | WP_038229233.1 | hypothetical protein | - |
| OK117_RS04445 (OK117_04460) | 1035686..1036111 | - | 426 | WP_004091423.1 | antirestriction protein | - |
| OK117_RS04450 (OK117_04465) | 1036235..1037308 | - | 1074 | WP_272143023.1 | toprim domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|