MGE detailed information
MGE type: Genomic_island MGE length: 9520 bp
Accession: NZ_CP109874 Location: 4340891..4350410 Organism: Escherichia coli strain EC488 Replicon: chromosome
Accession: NZ_CP109874 Location: 4340891..4350410 Organism: Escherichia coli strain EC488 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQ150_RS20875 (4337421) | 4337421..4338146 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NQ150_RS20880 (4338183) | 4338183..4338722 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| NQ150_RS20885 (4338787) | 4338787..4339335 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| NQ150_RS20890 (4339817) | 4339817..4340413 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| NQ150_RS20895 (4340891) | 4340891..4341493 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NQ150_RS20900 (4342949) | 4342949..4343665 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NQ150_RS20905 (4343685) | 4343685..4344791 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NQ150_RS20910 (4344856) | 4344856..4345836 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NQ150_RS20915 (4345946) | 4345946..4346151 | + | 206 | Protein_4096 | HNH endonuclease | - |
| NQ150_RS20920 (4346451) | 4346451..4347431 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| NQ150_RS20925 (4347618) | 4347618..4348858 | - | 1241 | Protein_4098 | helicase YjhR | - |
| NQ150_RS20930 (4348974) | 4348974..4349105 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NQ150_RS20935 (4349596) | 4349596..4349853 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NQ150_RS20940 (4349865) | 4349865..4350410 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NQ150_RS20945 (4350466) | 4350466..4351212 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NQ150_RS20950 (4351381) | 4351381..4351599 | + | 219 | Protein_4103 | hypothetical protein | - |
| NQ150_RS20955 (4351637) | 4351637..4351753 | + | 117 | Protein_4104 | VOC family protein | - |
| NQ150_RS20960 (4351998) | 4351998..4353119 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| NQ150_RS20965 (4353116) | 4353116..4353394 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NQ150_RS20970 (4353406) | 4353406..4354719 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|