MGE detailed information
MGE type: Genomic_island MGE length: 19612 bp
Accession: NZ_CP109843 Location: 1343500..1363111 Organism: Pseudomonas aeruginosa strain PALA29 Replicon: chromosome
Accession: NZ_CP109843 Location: 1343500..1363111 Organism: Pseudomonas aeruginosa strain PALA29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA29_RS06395 (PALA29_01265) | 1340010..1341587 | + | 1578 | WP_003105901.1 | glutamine-hydrolyzing GMP synthase | - |
| PALA29_RS06400 (PALA29_01266) | 1341896..1343104 | + | 1209 | WP_023114652.1 | site-specific integrase | - |
| PALA29_RS06405 (PALA29_01267) | 1343500..1344492 | - | 993 | WP_023114651.1 | hypothetical protein | - |
| PALA29_RS06410 (PALA29_01268) | 1344586..1344810 | + | 225 | WP_023114650.1 | AlpA family phage regulatory protein | - |
| PALA29_RS06415 (PALA29_01269) | 1344813..1345706 | + | 894 | WP_031637438.1 | helicase RepA family protein | - |
| PALA29_RS06420 | 1345687..1346664 | + | 978 | WP_031637437.1 | replication protein C, IncQ-type | - |
| PALA29_RS06425 (PALA29_01270) | 1347959..1348213 | + | 255 | WP_023114648.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PALA29_RS06430 (PALA29_01271) | 1348210..1348629 | + | 420 | WP_023114647.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PALA29_RS06435 (PALA29_01272) | 1348785..1349555 | + | 771 | WP_023114646.1 | P-type conjugative transfer protein TrbJ | - |
| PALA29_RS06440 (PALA29_01273) | 1349569..1349727 | + | 159 | WP_023114645.1 | hypothetical protein | - |
| PALA29_RS06445 (PALA29_01274) | 1349729..1351201 | + | 1473 | WP_023114644.1 | P-type conjugative transfer protein TrbL | - |
| PALA29_RS06450 (PALA29_01275) | 1351270..1351512 | + | 243 | WP_023114643.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| PALA29_RS06455 (PALA29_01276) | 1351524..1351808 | + | 285 | WP_023114642.1 | hypothetical protein | - |
| PALA29_RS06460 (PALA29_01277) | 1351811..1352179 | + | 369 | WP_023114641.1 | conjugal transfer transcriptional regulator TraJ | - |
| PALA29_RS06465 | 1352218..1352448 | - | 231 | WP_229033214.1 | hypothetical protein | - |
| PALA29_RS06470 | 1352428..1352676 | - | 249 | Protein_1281 | XRE family transcriptional regulator | - |
| PALA29_RS06475 (PALA29_01279) | 1353066..1353788 | + | 723 | WP_031637434.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PALA29_RS06480 (PALA29_01280) | 1354115..1354318 | + | 204 | WP_023114638.1 | helix-turn-helix domain-containing protein | - |
| PALA29_RS06485 (PALA29_01281) | 1354373..1357156 | + | 2784 | WP_023121022.1 | class I SAM-dependent DNA methyltransferase | - |
| PALA29_RS06490 (PALA29_01282) | 1357153..1359207 | + | 2055 | WP_023114636.1 | hypothetical protein | - |
| PALA29_RS06495 (PALA29_01283) | 1359200..1360408 | + | 1209 | WP_023114635.1 | GIY-YIG nuclease family protein | - |
| PALA29_RS06500 (PALA29_01284) | 1360517..1363111 | + | 2595 | WP_023114634.1 | AAA family ATPase | - |
| PALA29_RS06505 (PALA29_01285) | 1363718..1365109 | + | 1392 | WP_003122117.1 | multicopper oxidase family protein | - |
| PALA29_RS06510 (PALA29_01286) | 1365100..1365648 | + | 549 | WP_003092697.1 | tRNA adenosine(34) deaminase TadA | - |
| PALA29_RS06515 | 1365735..1365974 | - | 240 | WP_152959661.1 | hypothetical protein | - |
| PALA29_RS06520 (PALA29_01287) | 1366037..1367293 | + | 1257 | WP_003105913.1 | amino acid permease | - |
| PALA29_RS06525 (PALA29_01288) | 1367419..1368003 | + | 585 | WP_003113820.1 | DUF2239 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|