MGE detailed information
MGE type: Conjugative plasmid MGE length: 57547 bp
Accession: NZ_CP109840 Location: 1..57547 Organism: Enterococcus faecium strain T17-1 Replicon: plasmid pT17-1-optrA-57k
Accession: NZ_CP109840 Location: 1..57547 Organism: Enterococcus faecium strain T17-1 Replicon: plasmid pT17-1-optrA-57k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OKL57_RS12785 (OKL57_12780) | 120..254 | - | 135 | WP_002415371.1 | hypothetical protein | - |
| OKL57_RS12790 (OKL57_12785) | 518..2485 | - | 1968 | WP_223603182.1 | ABC-F type ribosomal protection protein OptrA | ARG |
| OKL57_RS12795 (OKL57_12790) | 2801..4228 | - | 1428 | WP_065813868.1 | chloramphenicol/florfenicol efflux MFS transporter FexA | ARG |
| OKL57_RS12800 (OKL57_12795) | 4482..4625 | - | 144 | WP_002360221.1 | hypothetical protein | - |
| OKL57_RS12805 (OKL57_12800) | 5073..5207 | + | 135 | Protein_4 | DNA repair protein RadC | - |
| OKL57_RS12810 (OKL57_12805) | 5430..5813 | + | 384 | Protein_5 | N-6 DNA methylase | - |
| OKL57_RS12815 (OKL57_12810) | 5869..6549 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| OKL57_RS12820 (OKL57_12815) | 6603..6725 | - | 123 | WP_159111623.1 | DpnD/PcfM family protein | - |
| OKL57_RS12825 (OKL57_12820) | 6760..7257 | - | 498 | WP_010713926.1 | molecular chaperone DnaJ | - |
| OKL57_RS12830 (OKL57_12825) | 7791..8108 | - | 318 | WP_002300567.1 | hypothetical protein | - |
| OKL57_RS12835 (OKL57_12830) | 8255..9118 | - | 864 | WP_001284311.1 | zeta toxin family protein | Toxin Detail |
| OKL57_RS12840 (OKL57_12835) | 9120..9392 | - | 273 | WP_000301765.1 | antitoxin | Antitoxin Detail |
| OKL57_RS12845 (OKL57_12840) | 9409..9624 | - | 216 | WP_001835296.1 | peptide-binding protein | - |
| OKL57_RS12850 (OKL57_12845) | 9758..10018 | - | 261 | Protein_13 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| OKL57_RS12855 (OKL57_12850) | 10188..10931 | - | 744 | Protein_14 | rRNA adenine N-6-methyltransferase | ARG |
| OKL57_RS12860 (OKL57_12855) | 11050..11133 | - | 84 | WP_001865637.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| OKL57_RS12865 (OKL57_12860) | 11182..11421 | - | 240 | WP_000635249.1 | peptide-binding protein | - |
| OKL57_RS12870 (OKL57_12865) | 11555..13699 | - | 2145 | WP_264460529.1 | type IA DNA topoisomerase | - |
| OKL57_RS12875 (OKL57_12870) | 13699..14316 | - | 618 | WP_001062589.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| OKL57_RS12880 (OKL57_12875) | 14330..14500 | - | 171 | WP_000713594.1 | hypothetical protein | - |
| OKL57_RS12885 (OKL57_12880) | 14857..15039 | - | 183 | Protein_20 | helix-turn-helix transcriptional regulator | - |
| OKL57_RS12890 (OKL57_12885) | 15712..16476 | - | 765 | WP_081140310.1 | iron export ABC transporter permease subunit FetB | - |
| OKL57_RS12895 (OKL57_12890) | 16473..17126 | - | 654 | WP_119219330.1 | putative iron export ATP-binding protein FetA | VF |
| OKL57_RS12900 (OKL57_12895) | 17210..17632 | - | 423 | WP_002307506.1 | cupin domain-containing protein | - |
| OKL57_RS12905 (OKL57_12900) | 18369..18557 | - | 189 | WP_235692363.1 | hypothetical protein | - |
| OKL57_RS12910 (OKL57_12905) | 18569..18886 | + | 318 | WP_235692364.1 | hypothetical protein | - |
| OKL57_RS12915 (OKL57_12910) | 18928..19242 | - | 315 | WP_235692365.1 | hypothetical protein | - |
| OKL57_RS12920 (OKL57_12915) | 19246..19533 | - | 288 | WP_114526070.1 | type III secretion system protein PrgN | - |
| OKL57_RS12925 (OKL57_12920) | 19670..21169 | - | 1500 | WP_235692366.1 | primase C-terminal domain-containing protein | - |
| OKL57_RS12930 (OKL57_12925) | 21857..22678 | + | 822 | WP_002298756.1 | ParA family protein | - |
| OKL57_RS12935 (OKL57_12930) | 22681..23085 | + | 405 | WP_002298757.1 | hypothetical protein | - |
| OKL57_RS12940 (OKL57_12935) | 23233..23598 | - | 366 | WP_002298758.1 | hypothetical protein | - |
| OKL57_RS12945 (OKL57_12940) | 23614..24885 | - | 1272 | WP_002341710.1 | Y-family DNA polymerase | - |
| OKL57_RS12950 (OKL57_12945) | 25129..25329 | - | 201 | WP_002298761.1 | hypothetical protein | - |
| OKL57_RS12955 (OKL57_12950) | 25433..25735 | - | 303 | WP_025481189.1 | hypothetical protein | - |
| OKL57_RS12960 (OKL57_12955) | 25919..26533 | + | 615 | WP_181711713.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| OKL57_RS12965 (OKL57_12960) | 26752..27348 | - | 597 | WP_005237668.1 | PBECR4 domain-containing protein | - |
| OKL57_RS12970 (OKL57_12965) | 27565..28689 | - | 1125 | WP_235692367.1 | hypothetical protein | VF |
| OKL57_RS12975 (OKL57_12970) | 28691..29416 | - | 726 | WP_016630100.1 | DUF6414 family protein | - |
| OKL57_RS12980 (OKL57_12975) | 29429..29893 | - | 465 | WP_235692368.1 | toll/interleukin-1 receptor domain-containing protein | - |
| OKL57_RS12985 (OKL57_12980) | 29979..30659 | - | 681 | WP_000191454.1 | IS6 family transposase ISEnfa1 | Transposase |
| OKL57_RS12990 (OKL57_12985) | 30715..31494 | - | 780 | Protein_41 | IS256 family transposase ISLgar5 | Transposase |
| OKL57_RS12995 (OKL57_12990) | 31597..32463 | - | 867 | WP_263751897.1 | LPXTG cell wall anchor domain-containing protein | - |
| OKL57_RS13000 (OKL57_12995) | 32876..35974 | - | 3099 | WP_002301650.1 | type I restriction endonuclease subunit R | - |
| OKL57_RS13005 (OKL57_13000) | 35977..37182 | - | 1206 | WP_002325634.1 | restriction endonuclease subunit S | - |
| OKL57_RS13010 (OKL57_13005) | 37179..38726 | - | 1548 | WP_002301648.1 | type I restriction-modification system subunit M | - |
| OKL57_RS13015 (OKL57_13010) | 39219..39464 | - | 246 | WP_002301647.1 | hypothetical protein | - |
| OKL57_RS13020 (OKL57_13015) | 39711..40088 | + | 378 | WP_002325633.1 | hypothetical protein | - |
| OKL57_RS13025 (OKL57_13020) | 40148..40501 | - | 354 | WP_002301645.1 | hypothetical protein | - |
| OKL57_RS13030 (OKL57_13025) | 40530..41498 | - | 969 | WP_002301644.1 | hypothetical protein | - |
| OKL57_RS13035 (OKL57_13030) | 41515..42459 | - | 945 | WP_002301643.1 | hypothetical protein | - |
| OKL57_RS13040 (OKL57_13035) | 42459..43382 | - | 924 | WP_002301641.1 | hypothetical protein | - |
| OKL57_RS13045 (OKL57_13040) | 43400..45055 | - | 1656 | WP_002301639.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OKL57_RS13050 (OKL57_13045) | 45048..45479 | - | 432 | WP_002301637.1 | hypothetical protein | - |
| OKL57_RS13055 (OKL57_13050) | 45484..46035 | - | 552 | WP_021109241.1 | hypothetical protein | - |
| OKL57_RS13060 (OKL57_13055) | 46048..47157 | - | 1110 | WP_021109240.1 | hypothetical protein | VF |
| OKL57_RS13065 (OKL57_13060) | 47179..48531 | - | 1353 | WP_104659242.1 | conjugal transfer protein TraF | - |
| OKL57_RS13070 (OKL57_13065) | 48545..50506 | - | 1962 | WP_231428364.1 | TrsE protein | - |
| OKL57_RS13075 (OKL57_13070) | 50517..51146 | - | 630 | WP_104888277.1 | hypothetical protein | - |
| OKL57_RS13080 (OKL57_13075) | 51163..51546 | - | 384 | WP_001083514.1 | glycosyl transferase | - |
| OKL57_RS13085 (OKL57_13080) | 51565..51897 | - | 333 | WP_000713503.1 | CagC family type IV secretion system protein | - |
| OKL57_RS13090 (OKL57_13085) | 51921..53915 | - | 1995 | WP_227158223.1 | hypothetical protein | Relaxase |
| OKL57_RS13095 (OKL57_13090) | 54198..54497 | + | 300 | WP_002325624.1 | hypothetical protein | - |
| OKL57_RS13100 (OKL57_13095) | 54500..54757 | + | 258 | WP_010717195.1 | hypothetical protein | - |
| OKL57_RS13105 (OKL57_13100) | 54787..54963 | - | 177 | WP_181728217.1 | hypothetical protein | - |
| OKL57_RS13110 (OKL57_13105) | 55035..55715 | - | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| OKL57_RS13115 (OKL57_13110) | 55917..56648 | + | 732 | WP_002360844.1 | rRNA adenine N-6-methyltransferase | ARG |
| OKL57_RS13120 (OKL57_13115) | 56773..57135 | - | 363 | WP_024378353.1 | EFR1 family ferrodoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|