MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88844 bp
Accession: NZ_CP109835 Location: 5427923..5516766 Organism: Pseudomonas aeruginosa strain PALA26 Replicon: chromosome
Accession: NZ_CP109835 Location: 5427923..5516766 Organism: Pseudomonas aeruginosa strain PALA26 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA26_RS25310 (PALA26_05007) | 5423439..5427692 | + | 4254 | WP_003141364.1 | two-partner secretion system exoprotein TpsA4 | - |
| PALA26_RS25320 (PALA26_05008) | 5428060..5428926 | + | 867 | WP_003111785.1 | ParA family protein | - |
| PALA26_RS25325 (PALA26_05009) | 5428928..5429665 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| PALA26_RS25330 (PALA26_05010) | 5429662..5430159 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| PALA26_RS25335 (PALA26_05011) | 5430156..5431307 | + | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| PALA26_RS25340 (PALA26_05012) | 5431307..5432008 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| PALA26_RS25345 (PALA26_05013) | 5432005..5432712 | + | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| PALA26_RS25350 (PALA26_05014) | 5432696..5432920 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| PALA26_RS25355 (PALA26_05015) | 5432917..5434260 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| PALA26_RS25360 | 5434699..5435145 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| PALA26_RS25365 (PALA26_05017) | 5435323..5435508 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| PALA26_RS25370 (PALA26_05018) | 5435498..5436025 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| PALA26_RS25375 (PALA26_05019) | 5436022..5436279 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| PALA26_RS25380 (PALA26_05020) | 5436272..5436514 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| PALA26_RS25385 (PALA26_05021) | 5436507..5436740 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA26_RS25390 (PALA26_05022) | 5436740..5437756 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| PALA26_RS25395 (PALA26_05023) | 5437759..5438013 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| PALA26_RS25400 (PALA26_05024) | 5438010..5439746 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| PALA26_RS25405 (PALA26_05025) | 5439774..5440541 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| PALA26_RS25410 (PALA26_05026) | 5440538..5441809 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| PALA26_RS25415 | 5441806..5442603 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| PALA26_RS25420 (PALA26_05029) | 5442760..5443488 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA26_RS25425 (PALA26_05030) | 5443494..5444042 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| PALA26_RS25430 (PALA26_05031) | 5444089..5444928 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| PALA26_RS25435 (PALA26_05032) | 5444958..5445446 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| PALA26_RS25440 | 5445602..5445769 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| PALA26_RS25445 (PALA26_05033) | 5445835..5446053 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| PALA26_RS25450 (PALA26_05034) | 5446067..5446264 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| PALA26_RS25455 (PALA26_05035) | 5446280..5446690 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PALA26_RS25460 | 5446690..5446920 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PALA26_RS25465 (PALA26_05036) | 5447176..5449095 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| PALA26_RS25470 | 5449403..5449612 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PALA26_RS25475 (PALA26_05037) | 5449833..5451722 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| PALA26_RS25480 (PALA26_05038) | 5451719..5453692 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| PALA26_RS25485 (PALA26_05039) | 5453814..5454596 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| PALA26_RS25490 (PALA26_05040) | 5454629..5455882 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| PALA26_RS25495 (PALA26_05041) | 5456056..5457180 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| PALA26_RS25500 (PALA26_05042) | 5457180..5458889 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| PALA26_RS25505 (PALA26_05043) | 5458893..5460218 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| PALA26_RS25510 (PALA26_05044) | 5460208..5460741 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| PALA26_RS25515 (PALA26_05045) | 5460750..5462330 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| PALA26_RS25520 (PALA26_05046) | 5462330..5463409 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA26_RS25525 (PALA26_05047) | 5463431..5463961 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| PALA26_RS25530 (PALA26_05048) | 5463958..5464899 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| PALA26_RS25535 (PALA26_05049) | 5464904..5466232 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| PALA26_RS25540 (PALA26_05050) | 5466261..5466698 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| PALA26_RS25545 (PALA26_05051) | 5467620..5468009 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| PALA26_RS25550 (PALA26_05052) | 5468084..5468260 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| PALA26_RS25555 (PALA26_05053) | 5468262..5468396 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA26_RS25560 (PALA26_05054) | 5468721..5469200 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PALA26_RS25565 (PALA26_05055) | 5469338..5469496 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA26_RS25570 (PALA26_05056) | 5469570..5469767 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| PALA26_RS25575 (PALA26_05058) | 5470252..5470959 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| PALA26_RS25580 (PALA26_05059) | 5471195..5471545 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| PALA26_RS25585 (PALA26_05060) | 5471602..5472213 | + | 612 | Protein_5058 | DUF3275 family protein | - |
| PALA26_RS25590 (PALA26_05061) | 5472496..5472858 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PALA26_RS25595 (PALA26_05062) | 5472926..5473180 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PALA26_RS25600 (PALA26_05063) | 5473273..5473878 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| PALA26_RS25605 (PALA26_05064) | 5473908..5475353 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| PALA26_RS25610 (PALA26_05065) | 5475458..5477707 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| PALA26_RS25615 | 5477732..5478115 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| PALA26_RS25620 (PALA26_05066) | 5478321..5478614 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| PALA26_RS25625 | 5478611..5479477 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| PALA26_RS25630 (PALA26_05068) | 5479737..5480429 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| PALA26_RS25635 (PALA26_05069) | 5480440..5481195 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA26_RS25640 (PALA26_05070) | 5481180..5481761 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| PALA26_RS25645 (PALA26_05071) | 5481758..5482258 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| PALA26_RS25650 (PALA26_05072) | 5482267..5482536 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PALA26_RS25655 (PALA26_05073) | 5482540..5484771 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA26_RS25660 (PALA26_05074) | 5484771..5485517 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA26_RS25665 | 5485535..5486026 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| PALA26_RS25670 (PALA26_05075) | 5486267..5487748 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| PALA26_RS25675 (PALA26_05076) | 5487880..5488989 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| PALA26_RS25680 | 5489034..5489300 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA26_RS25685 (PALA26_05077) | 5489518..5489817 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| PALA26_RS25690 (PALA26_05078) | 5489910..5490248 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| PALA26_RS25695 | 5490245..5490484 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA26_RS25700 (PALA26_05080) | 5490502..5490858 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA26_RS25705 (PALA26_05081) | 5490869..5491255 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| PALA26_RS25710 (PALA26_05082) | 5491252..5491911 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA26_RS25715 (PALA26_05083) | 5491908..5492792 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA26_RS25720 (PALA26_05084) | 5492776..5494281 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA26_RS25725 (PALA26_05085) | 5494259..5494702 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA26_RS25730 (PALA26_05086) | 5494702..5497644 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| PALA26_RS25735 (PALA26_05087) | 5497641..5497925 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PALA26_RS25740 (PALA26_05088) | 5497922..5498581 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| PALA26_RS25745 (PALA26_05089) | 5498578..5498796 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| PALA26_RS25750 (PALA26_05091) | 5500937..5501368 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA26_RS25755 (PALA26_05092) | 5501368..5502306 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA26_RS25760 (PALA26_05093) | 5502324..5503706 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| PALA26_RS25765 (PALA26_05094) | 5503706..5504053 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| PALA26_RS25770 (PALA26_05095) | 5504050..5505564 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA26_RS25775 (PALA26_05096) | 5505621..5505959 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| PALA26_RS25780 (PALA26_05097) | 5506078..5506350 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA26_RS25785 (PALA26_05098) | 5506354..5506704 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA26_RS25790 (PALA26_05099) | 5507115..5509574 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| PALA26_RS25795 (PALA26_05100) | 5509862..5511589 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| PALA26_RS25800 (PALA26_05101) | 5511600..5512613 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| PALA26_RS25805 (PALA26_05102) | 5513155..5515074 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| PALA26_RS25810 (PALA26_05103) | 5515071..5516351 | + | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA26_RS25830 (PALA26_05107) | 5517204..5519768 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PALA26_RS25835 (PALA26_05108) | 5519924..5520652 | - | 729 | WP_003094684.1 | peptidoglycan editing factor PgeF | - |
| PALA26_RS25840 (PALA26_05109) | 5520649..5521611 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|