MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 27725 bp
Accession: NZ_CP109815 Location: 1..27725 Organism: Campylobacter coli strain CC20JX12 Replicon: plasmid pCC20JX12-27K
Accession: NZ_CP109815 Location: 1..27725 Organism: Campylobacter coli strain CC20JX12 Replicon: plasmid pCC20JX12-27K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OH128_RS09145 (OH128_09145) | 230..643 | - | 414 | WP_002784930.1 | type II toxin-antitoxin system VapC family toxin | - |
| OH128_RS09150 (OH128_09150) | 640..1554 | - | 915 | WP_002791548.1 | hypothetical protein | - |
| OH128_RS09155 (OH128_09155) | 2485..2808 | - | 324 | WP_002790618.1 | hypothetical protein | - |
| OH128_RS09160 (OH128_09160) | 3008..3391 | + | 384 | WP_002823902.1 | hypothetical protein | - |
| OH128_RS09165 (OH128_09165) | 3354..5510 | + | 2157 | WP_057030765.1 | Protein TraI | Relaxase |
| OH128_RS09170 (OH128_09170) | 5751..5975 | - | 225 | WP_057030766.1 | hypothetical protein | - |
| OH128_RS09175 (OH128_09175) | 5978..6664 | - | 687 | WP_002779831.1 | Protein virC1 | VF |
| OH128_RS09180 (OH128_09180) | 6756..7151 | - | 396 | WP_057030767.1 | conjugal transfer protein TraM | - |
| OH128_RS09185 (OH128_09185) | 7191..7586 | - | 396 | WP_057030768.1 | hypothetical protein | - |
| OH128_RS09190 (OH128_09190) | 7667..8134 | - | 468 | WP_057030769.1 | hypothetical protein | VF |
| OH128_RS09195 (OH128_09195) | 8139..8792 | - | 654 | WP_057030770.1 | Fic family protein | Toxin Detail |
| OH128_RS09200 (OH128_09200) | 8776..9030 | - | 255 | WP_057030771.1 | hypothetical protein | Antitoxin Detail |
| OH128_RS09205 (OH128_09205) | 9124..9843 | - | 720 | WP_057030772.1 | conjugal transfer protein TraL | - |
| OH128_RS09210 (OH128_09210) | 9854..11677 | - | 1824 | WP_264378458.1 | Conjugal transfer protein TraG | VF |
| OH128_RS09215 (OH128_09215) | 11674..13887 | - | 2214 | WP_002795783.1 | zincin-like metallopeptidase domain-containing protein | - |
| OH128_RS09220 (OH128_09220) | 13892..14032 | - | 141 | WP_002779802.1 | hypothetical protein | - |
| OH128_RS09225 (OH128_09225) | 14019..14381 | - | 363 | WP_002779803.1 | single-stranded DNA-binding protein | - |
| OH128_RS09230 (OH128_09230) | 14478..15023 | - | 546 | WP_002779804.1 | lytic transglycosylase domain-containing protein | - |
| OH128_RS09235 (OH128_09235) | 15016..16257 | - | 1242 | WP_057030774.1 | Type IV secretion system protein virB10 | VF |
| OH128_RS09240 (OH128_09240) | 16261..16704 | - | 444 | WP_002814339.1 | hypothetical protein | - |
| OH128_RS09245 (OH128_09245) | 16701..17861 | - | 1161 | WP_194941876.1 | P-type conjugative transfer protein TrbG | - |
| OH128_RS09250 (OH128_09250) | 17872..18567 | - | 696 | WP_002790743.1 | VirB8/TrbF family protein | - |
| OH128_RS09255 (OH128_09255) | 18898..20112 | - | 1215 | WP_264378453.1 | P-type conjugative transfer protein TrbL | - |
| OH128_RS09260 (OH128_09260) | 20066..20290 | - | 225 | WP_032701215.1 | EexN family lipoprotein | - |
| OH128_RS09265 (OH128_09265) | 20334..21086 | - | 753 | WP_264378454.1 | P-type conjugative transfer protein TrbJ | - |
| OH128_RS09270 (OH128_09270) | 21675..22229 | - | 555 | WP_264378455.1 | BRO family protein | - |
| OH128_RS09275 (OH128_09275) | 22235..22672 | - | 438 | Protein_26 | Rha family transcriptional regulator | - |
| OH128_RS09280 (OH128_09280) | 22684..23550 | - | 867 | WP_233909693.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OH128_RS09285 (OH128_09285) | 23547..26012 | - | 2466 | WP_264378456.1 | conjugal transfer protein TrbE | - |
| OH128_RS09290 (OH128_09290) | 26016..26303 | - | 288 | WP_002779817.1 | conjugal transfer protein TrbD | - |
| OH128_RS09295 (OH128_09295) | 26303..26599 | - | 297 | WP_023890687.1 | TrbC/VirB2 family protein | - |
| OH128_RS09300 (OH128_09300) | 26609..27547 | - | 939 | WP_264378457.1 | Type IV secretion system protein PtlH | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|