262129

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 8139..9030 Replicon plasmid pCC20JX12-27K
Accession NZ_CP109815
Organism Campylobacter coli strain CC20JX12

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag OH128_RS09195 Protein ID WP_057030770.1
Coordinates 8139..8792 (-) Length 218 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag OH128_RS09200 Protein ID WP_057030771.1
Coordinates 8776..9030 (-) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH128_RS09165 (OH128_09165) 3354..5510 + 2157 WP_057030765.1 relaxase/mobilization nuclease domain-containing protein -
OH128_RS09170 (OH128_09170) 5751..5975 - 225 WP_057030766.1 hypothetical protein -
OH128_RS09175 (OH128_09175) 5978..6664 - 687 WP_002779831.1 AAA family ATPase -
OH128_RS09180 (OH128_09180) 6756..7151 - 396 WP_057030767.1 conjugal transfer protein TraM -
OH128_RS09185 (OH128_09185) 7191..7586 - 396 WP_057030768.1 hypothetical protein -
OH128_RS09190 (OH128_09190) 7667..8134 - 468 WP_057030769.1 signal peptidase I -
OH128_RS09195 (OH128_09195) 8139..8792 - 654 WP_057030770.1 Fic family protein Toxin
OH128_RS09200 (OH128_09200) 8776..9030 - 255 WP_057030771.1 hypothetical protein Antitoxin
OH128_RS09205 (OH128_09205) 9124..9843 - 720 WP_057030772.1 conjugal transfer protein TraL -
OH128_RS09210 (OH128_09210) 9854..11677 - 1824 WP_264378458.1 type IV secretory system conjugative DNA transfer family protein -
OH128_RS09215 (OH128_09215) 11674..13887 - 2214 WP_002795783.1 zincin-like metallopeptidase domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..27725 27725


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(50-159)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 218 a.a.        Molecular weight: 25091.79 Da        Isoelectric Point: 10.1994

>T262129 WP_057030770.1 NZ_CP109815:c8792-8139 [Campylobacter coli]
MKESNEELFKRLITDNKLGIKDEKLFDKESRKYTLTRTKEIIKTPIKGNFDYQHLKNIHKYIFQDVFHWAGKDRMEVGLH
GNFGKYAPNGTITNFVPGKDLNATAQQIFTWLKEDNYLKNSKDLNDFAKNLAEFARNLNALHPFREGNGRTQRIFLNELA
KNAGYKLDLNLIPKDKTIMASVEASQLKLGKLEAIIKTNLKSFRQNLDLEQNKGISL

Download         Length: 654 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9868.19 Da        Isoelectric Point: 4.4996

>AT262129 WP_057030771.1 NZ_CP109815:c9030-8776 [Campylobacter coli]
MQKQYPEVHSLEESLAILKKYKDDVSKKDYEEIKSTICGHAIEDIFANEEDIIMLVKMSAYNLSSDEIIAEYKEKGFVEY
ERKQ

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References