MGE detailed information
MGE type: Prophage MGE length: 25399 bp
Accession: NZ_CP109775 Location: 2414818..2440216 Organism: Shigella sonnei strain CIP_106347 Replicon: chromosome
Accession: NZ_CP109775 Location: 2414818..2440216 Organism: Shigella sonnei strain CIP_106347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHN14_RS12430 () | 2410568..2411631 | + | 1064 | Protein_2432 | MFS transporter | - |
| OHN14_RS12435 () | 2411677..2412558 | - | 882 | WP_000984517.1 | protease HtpX | - |
| OHN14_RS12440 () | 2412750..2414798 | - | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| OHN14_RS12445 () | 2414818..2415516 | - | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| OHN14_RS12450 () | 2415613..2416110 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| OHN14_RS12455 () | 2416240..2417523 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| OHN14_RS12460 () | 2417492..2420125 | + | 2634 | WP_005138565.1 | Intermembrane transport protein YebT | VF |
| OHN14_RS12465 () | 2420206..2421645 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OHN14_RS12470 () | 2421763..2421846 | + | 84 | Protein_2440 | DUF1480 family protein | - |
| OHN14_RS12480 () | 2422618..2422776 | + | 159 | Protein_2442 | DUF1480 family protein | - |
| OHN14_RS12485 () | 2422881..2423072 | + | 192 | WP_001296140.1 | YebW family protein | - |
| OHN14_RS12490 () | 2423073..2423273 | - | 201 | Protein_2444 | serine/threonine-protein phosphatase | - |
| OHN14_RS12500 () | 2424529..2424834 | - | 306 | Protein_2446 | serine/threonine-protein phosphatase | - |
| OHN14_RS12505 () | 2424889..2425586 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OHN14_RS12510 () | 2425600..2425773 | - | 174 | Protein_2448 | metallophosphoesterase | - |
| OHN14_RS12515 () | 2426424..2427580 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| OHN14_RS12520 () | 2427782..2429497 | + | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| OHN14_RS12530 () | 2430914..2431174 | + | 261 | WP_077447296.1 | excisionase | - |
| OHN14_RS12535 () | 2431203..2431657 | + | 455 | Protein_2453 | IS1-like element IS1A family transposase | - |
| OHN14_RS12540 () | 2431752..2432980 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| OHN14_RS12545 () | 2432991..2433236 | + | 246 | Protein_2455 | IS1 family transposase IS1R | Transposase |
| OHN14_RS12550 () | 2433273..2434349 | + | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| - | 2434480..2434714 | + | 235 | - | - | Antitoxin Detail |
| - | 2434481..2434584 | - | 104 | - | - | Toxin Detail |
| OHN14_RS12555 () | 2434742..2435083 | - | 342 | WP_000976476.1 | YebY family protein | - |
| OHN14_RS12560 () | 2435096..2435968 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| OHN14_RS12565 () | 2435972..2436346 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| OHN14_RS12570 () | 2436485..2436715 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| OHN14_RS12575 () | 2436817..2437473 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| OHN14_RS12580 () | 2437497..2438159 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| OHN14_RS12585 () | 2438156..2440216 | - | 2061 | WP_000936913.1 | oligopeptidase B | - |
| OHN14_RS12590 () | 2440425..2441084 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| OHN14_RS12595 () | 2441411..2441767 | - | 357 | WP_001295500.1 | protein YebF | - |
| OHN14_RS12600 () | 2441834..2442124 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| OHN14_RS12605 () | 2442258..2443436 | + | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OHN14_RS12610 () | 2443492..2444133 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|