MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66976 bp
Accession: NZ_CP109603 Location: 5416024..5482999 Organism: Pseudomonas putida strain SEH01 Replicon: chromosome
Accession: NZ_CP109603 Location: 5416024..5482999 Organism: Pseudomonas putida strain SEH01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGV19_RS24405 | 5411890..5412663 | + | 774 | WP_264311013.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| OGV19_RS24410 | 5412777..5414318 | + | 1542 | WP_264311014.1 | APC family permease | - |
| OGV19_RS24415 | 5414455..5415075 | - | 621 | WP_264311015.1 | guanylate kinase | - |
| OGV19_RS24420 | 5415089..5415952 | - | 864 | WP_264311016.1 | YicC/YloC family endoribonuclease | - |
| OGV19_RS24425 | 5416178..5416900 | + | 723 | WP_264311017.1 | ribonuclease PH | - |
| OGV19_RS24430 | 5416961..5417740 | - | 780 | WP_003253401.1 | exodeoxyribonuclease III | - |
| OGV19_RS24435 | 5417821..5418462 | + | 642 | WP_003253405.1 | orotate phosphoribosyltransferase | - |
| OGV19_RS24440 | 5418642..5419547 | - | 906 | WP_027592158.1 | acetylglutamate kinase | - |
| OGV19_RS24445 | 5419578..5420945 | - | 1368 | Protein_4791 | Phosphomannomutase/phosphoglucomutase | VF |
| OGV19_RS24450 | 5421087..5421542 | - | 456 | WP_264311018.1 | dUTP diphosphatase | - |
| OGV19_RS24455 | 5421548..5422759 | - | 1212 | WP_027592161.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| OGV19_RS24460 | 5422887..5423567 | + | 681 | WP_264311019.1 | DNA repair protein RadC | - |
| OGV19_RS24465 | 5423688..5425277 | - | 1590 | WP_264311020.1 | ABC transporter substrate-binding protein | - |
| OGV19_RS24470 | 5425638..5425874 | + | 237 | WP_003253504.1 | 50S ribosomal protein L28 | - |
| OGV19_RS24475 | 5425886..5426041 | + | 156 | WP_003253507.1 | 50S ribosomal protein L33 | - |
| OGV19_RS24480 | 5426115..5426474 | - | 360 | WP_264311021.1 | cupin domain-containing protein | - |
| OGV19_RS24485 | 5426671..5428164 | + | 1494 | WP_264311022.1 | aldehyde dehydrogenase | - |
| OGV19_RS24490 | 5428304..5429443 | + | 1140 | WP_264311023.1 | MFS transporter | - |
| OGV19_RS24495 | 5429525..5431081 | - | 1557 | WP_264311024.1 | Cardiolipin synthase C | VF |
| OGV19_RS24500 | 5431142..5432572 | - | 1431 | WP_264311025.1 | PLP-dependent aminotransferase family protein | - |
| OGV19_RS24505 | 5432751..5432981 | + | 231 | WP_264311026.1 | DUF1127 domain-containing protein | - |
| OGV19_RS24510 | 5433014..5434306 | - | 1293 | WP_264311027.1 | FAD-binding oxidoreductase | - |
| OGV19_RS24515 | 5434440..5434793 | + | 354 | WP_264311028.1 | YkgJ family cysteine cluster protein | - |
| OGV19_RS24520 | 5434796..5435284 | - | 489 | WP_003258963.1 | transcriptional regulator DadR | - |
| OGV19_RS24525 | 5435440..5436744 | + | 1305 | WP_264311029.1 | D-amino acid dehydrogenase | - |
| OGV19_RS24530 | 5436893..5437966 | + | 1074 | WP_264311030.1 | alanine racemase | - |
| OGV19_RS24535 | 5438091..5438639 | + | 549 | WP_264311031.1 | cupin domain-containing protein | - |
| OGV19_RS24540 | 5438794..5439198 | + | 405 | WP_033692624.1 | c-type cytochrome | - |
| OGV19_RS24545 | 5439426..5441282 | + | 1857 | WP_264311032.1 | acetyl-CoA hydrolase/transferase C-terminal domain-containing protein | - |
| OGV19_RS24550 | 5441405..5441977 | - | 573 | WP_264311033.1 | xanthine phosphoribosyltransferase | - |
| OGV19_RS24555 | 5442043..5444052 | - | 2010 | WP_099430788.1 | DNA helicase Rep | - |
| OGV19_RS24560 | 5444340..5446004 | + | 1665 | WP_264311034.1 | hypothetical protein | VF |
| OGV19_RS24565 | 5446037..5447425 | - | 1389 | WP_264311035.1 | NorM family multidrug efflux MATE transporter | - |
| OGV19_RS24570 | 5447581..5448534 | + | 954 | WP_264311036.1 | Glycine cleavage system transcriptional activator | VF |
| OGV19_RS24575 | 5448538..5449932 | - | 1395 | WP_264311037.1 | VOC family protein | - |
| OGV19_RS24580 | 5450070..5450960 | - | 891 | WP_264311038.1 | LysR family transcriptional regulator | - |
| OGV19_RS24585 | 5451084..5452586 | + | 1503 | Protein_4819 | aldehyde dehydrogenase family protein | - |
| OGV19_RS24590 | 5452765..5454051 | + | 1287 | WP_264311039.1 | FAD-binding oxidoreductase | - |
| OGV19_RS24595 | 5454160..5455587 | - | 1428 | WP_264311040.1 | mechanosensitive ion channel family protein | - |
| OGV19_RS24600 | 5455807..5456436 | + | 630 | WP_264311041.1 | isochorismate family cysteine hydrolase YcaC | - |
| OGV19_RS24605 | 5456554..5457120 | + | 567 | WP_264311042.1 | antibiotic biosynthesis monooxygenase | - |
| OGV19_RS24610 | 5457160..5457978 | + | 819 | WP_264311043.1 | alpha/beta hydrolase | - |
| OGV19_RS24615 | 5458266..5460107 | + | 1842 | WP_264313998.1 | amidohydrolase | - |
| OGV19_RS24620 | 5460193..5460321 | - | 129 | WP_264314021.1 | hypothetical protein | - |
| OGV19_RS24625 | 5460570..5461481 | - | 912 | WP_264311044.1 | LysR substrate-binding domain-containing protein | - |
| OGV19_RS24630 | 5461617..5462246 | + | 630 | WP_264311045.1 | isochorismate family cysteine hydrolase YcaC | - |
| OGV19_RS24635 | 5462477..5464264 | - | 1788 | WP_264311046.1 | monovalent cation:proton antiporter-2 (CPA2) family protein | - |
| OGV19_RS24640 | 5464447..5465934 | - | 1488 | WP_264311047.1 | YifB family Mg chelatase-like AAA ATPase | - |
| OGV19_RS24645 | 5466086..5466661 | - | 576 | WP_264311048.1 | PIN domain-containing protein | Toxin Detail |
| OGV19_RS24650 | 5466661..5467125 | - | 465 | WP_264311049.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| OGV19_RS24655 | 5467499..5469511 | + | 2013 | WP_264311050.1 | DUF4034 domain-containing protein | - |
| OGV19_RS24660 | 5469537..5469965 | - | 429 | WP_264311051.1 | TOBE domain-containing protein | - |
| OGV19_RS24665 | 5469989..5470252 | - | 264 | WP_264311052.1 | accessory factor UbiK family protein | - |
| OGV19_RS24670 | 5470631..5470969 | + | 339 | WP_002555808.1 | P-II family nitrogen regulator | - |
| OGV19_RS24675 | 5471016..5472347 | + | 1332 | WP_264311053.1 | ammonium transporter | - |
| OGV19_RS24680 | 5472780..5473106 | + | 327 | WP_264311054.1 | transcriptional regulator SutA | - |
| OGV19_RS24685 | 5473212..5474431 | + | 1220 | WP_264311055.1 | IS3 family transposase ISPa57 | Transposase |
| OGV19_RS24690 | 5474595..5475290 | - | 696 | WP_264311056.1 | HAD family hydrolase | - |
| OGV19_RS24695 | 5475287..5476186 | - | 900 | WP_264311057.1 | Tyrosine recombinase XerC | VF |
| OGV19_RS24700 | 5476186..5476896 | - | 711 | WP_264311058.1 | DUF484 family protein | - |
| OGV19_RS24705 | 5476910..5477740 | - | 831 | WP_264311059.1 | diaminopimelate epimerase | - |
| OGV19_RS24710 | 5477745..5478992 | - | 1248 | WP_264311060.1 | diaminopimelate decarboxylase | - |
| OGV19_RS24715 | 5479002..5479217 | - | 216 | WP_264311061.1 | lipoprotein | - |
| OGV19_RS24720 | 5479409..5479741 | + | 333 | WP_264311062.1 | iron donor protein CyaY | - |
| OGV19_RS24725 | 5479743..5479955 | + | 213 | WP_264311063.1 | DUF1289 domain-containing protein | - |
| OGV19_RS24730 | 5480088..5480498 | + | 411 | WP_264311064.1 | nucleoside diphosphate kinase regulator | - |
| OGV19_RS24735 | 5480622..5483480 | - | 2859 | WP_264311065.1 | class I adenylate cyclase | - |
| OGV19_RS24740 | 5483677..5484132 | + | 456 | WP_264311066.1 | YaiI/YqxD family protein | - |
| OGV19_RS24745 | 5484198..5484866 | - | 669 | WP_264311067.1 | isoprenoid biosynthesis glyoxalase ElbB | - |
| OGV19_RS24750 | 5484979..5485605 | + | 627 | Protein_4852 | sterol desaturase family protein | - |
| OGV19_RS24755 | 5486107..5486751 | - | 645 | WP_264311068.1 | DedA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|