MGE detailed information
MGE type: Prophage MGE length: 41073 bp
Accession: NZ_CP109603 Location: 4938226..4979298 Organism: Pseudomonas putida strain SEH01 Replicon: chromosome
Accession: NZ_CP109603 Location: 4938226..4979298 Organism: Pseudomonas putida strain SEH01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGV19_RS22250 | 4933620..4934468 | + | 849 | WP_264313988.1 | choline ABC transporter permease subunit | - |
| OGV19_RS22255 | 4934465..4935643 | + | 1179 | WP_027594275.1 | choline ABC transporter ATP-binding protein | - |
| OGV19_RS22260 | 4935780..4936550 | - | 771 | WP_264310662.1 | imidazole glycerol phosphate synthase subunit HisF | - |
| OGV19_RS22265 | 4936561..4937298 | - | 738 | WP_016484508.1 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | - |
| OGV19_RS22270 | 4937326..4937586 | - | 261 | WP_264310663.1 | DUF2164 domain-containing protein | - |
| OGV19_RS22275 | 4937587..4938225 | - | 639 | WP_264310664.1 | imidazole glycerol phosphate synthase subunit HisH | - |
| OGV19_RS22280 | 4938226..4938819 | - | 594 | WP_264310665.1 | imidazoleglycerol-phosphate dehydratase HisB | - |
| OGV19_RS22285 | 4938992..4940653 | - | 1662 | WP_264310666.1 | OFA family MFS transporter | - |
| OGV19_RS22290 | 4941060..4943309 | + | 2250 | WP_264310667.1 | AsmA family protein | - |
| OGV19_RS22295 | 4943306..4944373 | + | 1068 | WP_264310668.1 | A/G-specific adenine glycosylase | - |
| OGV19_RS22300 | 4944370..4944642 | + | 273 | WP_264310669.1 | oxidative damage protection protein | - |
| OGV19_RS22310 | 4944927..4945232 | - | 306 | WP_264310670.1 | putative addiction module antidote protein | Antitoxin Detail |
| OGV19_RS22315 | 4945242..4945532 | - | 291 | WP_264310671.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OGV19_RS22320 | 4945709..4946671 | + | 963 | WP_264310672.1 | polyphosphate kinase 2 | - |
| OGV19_RS22325 | 4946681..4947214 | - | 534 | WP_264310673.1 | hypothetical protein | - |
| OGV19_RS22330 | 4947344..4947787 | + | 444 | WP_027594262.1 | hypothetical protein | - |
| OGV19_RS22335 | 4947960..4949345 | - | 1386 | WP_264310674.1 | GABA permease | - |
| OGV19_RS22340 | 4949910..4950845 | + | 936 | WP_264309399.1 | IS110 family transposase ISMno7 | Transposase |
| OGV19_RS22345 | 4951239..4952012 | + | 774 | WP_264310675.1 | Octopine permease ATP-binding protein P | VF |
| OGV19_RS22350 | 4952026..4952787 | + | 762 | WP_264310676.1 | ABC transporter substrate-binding protein | - |
| OGV19_RS22355 | 4952843..4953535 | + | 693 | WP_264310677.1 | ABC transporter permease | - |
| OGV19_RS22360 | 4953535..4954224 | + | 690 | WP_264310678.1 | ABC transporter permease | - |
| OGV19_RS22365 | 4954350..4955561 | + | 1212 | WP_264310679.1 | SAM-dependent methyltransferase | - |
| OGV19_RS22370 | 4955798..4956091 | - | 294 | WP_264310680.1 | DUF3077 domain-containing protein | - |
| OGV19_RS22375 | 4956548..4956796 | + | 249 | WP_264310681.1 | hypothetical protein | - |
| OGV19_RS22385 | 4957347..4957553 | + | 207 | WP_264313989.1 | AlpA family transcriptional regulator | - |
| OGV19_RS22390 | 4957676..4957924 | - | 249 | WP_264310682.1 | pyocin activator PrtN family protein | - |
| OGV19_RS22395 | 4958584..4958787 | - | 204 | WP_027610146.1 | hypothetical protein | - |
| OGV19_RS22400 | 4959010..4959255 | - | 246 | WP_264310683.1 | hypothetical protein | - |
| OGV19_RS22405 | 4960240..4960644 | - | 405 | WP_264310684.1 | hypothetical protein | - |
| OGV19_RS22410 | 4960628..4961524 | - | 897 | WP_264310685.1 | hypothetical protein | - |
| OGV19_RS22415 | 4962727..4963341 | - | 615 | WP_264310686.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| OGV19_RS22420 | 4963486..4963800 | - | 315 | WP_264310687.1 | hypothetical protein | - |
| OGV19_RS22425 | 4963797..4967411 | - | 3615 | WP_264310688.1 | phage tail length tape measure family protein | - |
| OGV19_RS22430 | 4967503..4967688 | - | 186 | WP_264310689.1 | hypothetical protein | - |
| OGV19_RS22435 | 4967970..4968581 | - | 612 | WP_060538543.1 | hypothetical protein | - |
| OGV19_RS22440 | 4968758..4969702 | - | 945 | WP_050580700.1 | sigma-70 family RNA polymerase sigma factor | - |
| OGV19_RS22445 | 4969706..4970305 | - | 600 | WP_264310690.1 | hypothetical protein | - |
| OGV19_RS22450 | 4970302..4970604 | - | 303 | WP_264310691.1 | hypothetical protein | - |
| OGV19_RS22455 | 4970941..4972740 | - | 1800 | WP_264310692.1 | DUF927 domain-containing protein | - |
| OGV19_RS22460 | 4972727..4973617 | - | 891 | WP_264310693.1 | toprim domain-containing protein | - |
| OGV19_RS22465 | 4973614..4973841 | - | 228 | WP_196128462.1 | hypothetical protein | - |
| OGV19_RS22470 | 4973834..4974118 | - | 285 | WP_264310694.1 | hypothetical protein | - |
| OGV19_RS22475 | 4974121..4974837 | - | 717 | WP_198749613.1 | hypothetical protein | - |
| OGV19_RS22480 | 4974834..4975049 | - | 216 | WP_198749612.1 | hypothetical protein | - |
| OGV19_RS22485 | 4975046..4975345 | - | 300 | WP_198749611.1 | hypothetical protein | - |
| OGV19_RS22490 | 4975671..4975829 | - | 159 | WP_198749610.1 | hypothetical protein | - |
| OGV19_RS22495 | 4976150..4976455 | - | 306 | WP_264310695.1 | helix-turn-helix domain-containing protein | - |
| OGV19_RS22500 | 4977850..4979298 | - | 1449 | WP_264310696.1 | hypothetical protein ; Integrase | Integrase |
| OGV19_RS22505 | 4980186..4980515 | + | 330 | WP_264310697.1 | DUF2834 domain-containing protein | - |
| OGV19_RS22510 | 4980671..4980877 | + | 207 | WP_264310698.1 | DUF3079 domain-containing protein | - |
| OGV19_RS22515 | 4980946..4983243 | - | 2298 | WP_264310699.1 | TonB-dependent siderophore receptor | - |
| OGV19_RS22520 | 4983384..4984103 | + | 720 | WP_264310700.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|