MGE detailed information
MGE type: Conjugative plasmid MGE length: 86134 bp
Accession: NZ_CP107288 Location: 1..86134 Organism: Escherichia coli strain SW4848 Replicon: plasmid p86
Accession: NZ_CP107288 Location: 1..86134 Organism: Escherichia coli strain SW4848 Replicon: plasmid p86
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS25090 (OF379_25090) | 46..1077 | + | 1032 | WP_000907881.1 | plasmid replication initiator RepA | - |
| OF379_RS25095 (OF379_25095) | 1775..1933 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| OF379_RS25100 (OF379_25100) | 1988..2257 | + | 270 | WP_000079932.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| OF379_RS25105 (OF379_25105) | 2257..2535 | + | 279 | WP_013009346.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| OF379_RS25110 (OF379_25110) | 2731..3027 | - | 297 | WP_001419651.1 | hypothetical protein | - |
| OF379_RS25115 (OF379_25115) | 3372..3959 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| OF379_RS25120 (OF379_25120) | 4241..4834 | - | 594 | WP_001401779.1 | ProQ/FINO family protein | - |
| OF379_RS25125 (OF379_25125) | 5188..6534 | + | 1347 | WP_001132021.1 | protein YagA | - |
| OF379_RS25130 (OF379_25130) | 7125..7427 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| OF379_RS25135 (OF379_25135) | 7424..8050 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| OF379_RS25140 (OF379_25140) | 8254..9525 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| OF379_RS25145 (OF379_25145) | 9525..9962 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OF379_RS25150 (OF379_25150) | 9959..10207 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| OF379_RS25155 (OF379_25155) | 10626..11528 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| OF379_RS25160 (OF379_25160) | 11532..11837 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| OF379_RS25165 (OF379_25165) | 11913..12596 | + | 684 | WP_001401756.1 | DNA methylase | - |
| OF379_RS25170 (OF379_25170) | 12597..12818 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| OF379_RS25175 (OF379_25175) | 12712..13266 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| OF379_RS25180 (OF379_25180) | 13311..14086 | + | 776 | Protein_18 | hypothetical protein | - |
| OF379_RS25185 (OF379_25185) | 14501..14926 | + | 426 | WP_001198874.1 | antirestriction protein | - |
| OF379_RS25190 (OF379_25190) | 14973..15395 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| OF379_RS25195 (OF379_25195) | 15392..15583 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| OF379_RS25200 (OF379_25200) | 15916..15984 | - | 69 | Protein_22 | pilus protein | - |
| OF379_RS25205 (OF379_25205) | 16353..16880 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| OF379_RS25210 (OF379_25210) | 16938..17171 | + | 234 | WP_193108500.1 | DUF905 family protein | - |
| OF379_RS25215 (OF379_25215) | 17230..19188 | + | 1959 | WP_193108499.1 | ParB/RepB/Spo0J family partition protein | - |
| OF379_RS25220 (OF379_25220) | 19243..19677 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| OF379_RS25225 (OF379_25225) | 19674..20393 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| OF379_RS25230 (OF379_25230) | 20390..20986 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| OF379_RS25235 (OF379_25235) | 21448..21948 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| OF379_RS25240 (OF379_25240) | 22681..23115 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| OF379_RS25245 (OF379_25245) | 23208..23474 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| OF379_RS25250 (OF379_25250) | 23651..24040 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| OF379_RS25255 (OF379_25255) | 24037..24927 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| OF379_RS25260 (OF379_25260) | 24927..25172 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| OF379_RS25265 (OF379_25265) | 25203..25454 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| OF379_RS25270 (OF379_25270) | 26034..26882 | + | 849 | WP_193108497.1 | DUF4942 domain-containing protein | - |
| OF379_RS25275 (OF379_25275) | 26968..27303 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| OF379_RS25280 (OF379_25280) | 27536..27868 | + | 333 | WP_001291057.1 | plasmid mobilization protein MobA | - |
| OF379_RS25285 (OF379_25285) | 27880..30600 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| OF379_RS25290 (OF379_25290) | 30821..33121 | - | 2301 | WP_013307869.1 | F-type conjugative transfer protein TrbC | - |
| OF379_RS25295 (OF379_25295) | 33102..34226 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| OF379_RS25300 (OF379_25300) | 34223..35485 | - | 1263 | WP_001028764.1 | IncI1-type conjugal transfer protein TrbA | - |
| OF379_RS25305 (OF379_25305) | 36162..36413 | + | 252 | WP_001081067.1 | DinQ-like type I toxin DqlB | - |
| OF379_RS25310 (OF379_25310) | 36476..36652 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| OF379_RS25315 (OF379_25315) | 36802..37269 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| OF379_RS25320 (OF379_25320) | 37428..38051 | + | 624 | WP_001155247.1 | helix-turn-helix domain-containing protein | - |
| OF379_RS25325 (OF379_25325) | 38249..38464 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| OF379_RS25330 (OF379_25330) | 38468..38836 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| OF379_RS25335 (OF379_25335) | 39127..39369 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| OF379_RS25340 (OF379_25340) | 39699..39851 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| OF379_RS25345 (OF379_25345) | 39989..41575 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OF379_RS25350 (OF379_25350) | 41849..42502 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| OF379_RS25355 (OF379_25355) | 42590..44755 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| OF379_RS25360 (OF379_25360) | 44830..45399 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| OF379_RS25365 (OF379_25365) | 45396..46601 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| OF379_RS25370 (OF379_25370) | 46559..47179 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| OF379_RS25375 (OF379_25375) | 47179..50223 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| OF379_RS25380 (OF379_25380) | 50518..51336 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| OF379_RS25385 (OF379_25385) | 51350..51502 | - | 153 | Protein_59 | TraS | - |
| OF379_RS25390 (OF379_25390) | 51559..51957 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| OF379_RS25395 (OF379_25395) | 52004..52534 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| OF379_RS25400 (OF379_25400) | 52531..53244 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| OF379_RS25405 (OF379_25405) | 53241..54578 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| OF379_RS25410 (OF379_25410) | 54582..55556 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| OF379_RS25415 (OF379_25415) | 55567..56262 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| OF379_RS25420 (OF379_25420) | 56274..56624 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| OF379_RS25425 (OF379_25425) | 56641..60702 | - | 4062 | WP_013307874.1 | DUF5710 domain-containing protein | - |
| OF379_RS25430 (OF379_25430) | 61056..61637 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| OF379_RS25435 (OF379_25435) | 61869..62159 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| OF379_RS25440 (OF379_25440) | 62156..63304 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| OF379_RS25445 (OF379_25445) | 63288..64124 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| OF379_RS25450 (OF379_25450) | 64121..64579 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| OF379_RS25455 (OF379_25455) | 64683..65885 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| OF379_RS25460 (OF379_25460) | 65987..66808 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| OF379_RS25465 (OF379_25465) | 67021..68145 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| OF379_RS25470 (OF379_25470) | 68200..68439 | + | 240 | WP_224671100.1 | pilus assembly protein PilV | - |
| OF379_RS25475 (OF379_25475) | 69380..69676 | + | 297 | WP_001014414.1 | phage tail protein | - |
| OF379_RS25480 (OF379_25480) | 69681..71003 | - | 1323 | WP_052993642.1 | hypothetical protein | VF |
| OF379_RS25485 (OF379_25485) | 71021..71647 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| OF379_RS25490 (OF379_25490) | 71663..72148 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| OF379_RS25495 (OF379_25495) | 72193..72729 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| OF379_RS25500 (OF379_25500) | 72791..73885 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| OF379_RS25505 (OF379_25505) | 73887..75395 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| OF379_RS25510 (OF379_25510) | 75498..75956 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| OF379_RS25515 (OF379_25515) | 75946..77241 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| OF379_RS25520 (OF379_25520) | 77262..78881 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| OF379_RS25525 (OF379_25525) | 78913..79350 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| OF379_RS25530 (OF379_25530) | 79354..80424 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| OF379_RS25535 (OF379_25535) | 80651..80986 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| OF379_RS25540 (OF379_25540) | 81102..81344 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| OF379_RS25545 (OF379_25545) | 81425..83119 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| OF379_RS25550 (OF379_25550) | 83146..83766 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| OF379_RS25555 (OF379_25555) | 84033..84695 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| OF379_RS25560 (OF379_25560) | 84836..85477 | - | 642 | WP_001681782.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|