MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33549 bp
Accession: NZ_CP107287 Location: 1..33549 Organism: Escherichia coli strain SW4848 Replicon: plasmid p34
Accession: NZ_CP107287 Location: 1..33549 Organism: Escherichia coli strain SW4848 Replicon: plasmid p34
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS24870 (OF379_24870) | 7..873 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| OF379_RS24875 (OF379_24875) | 886..1290 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| OF379_RS24880 (OF379_24880) | 1425..1952 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| OF379_RS24885 (OF379_24885) | 2536..2820 | - | 285 | WP_263955275.1 | hypothetical protein | - |
| OF379_RS24890 (OF379_24890) | 2856..3158 | - | 303 | WP_001096507.1 | hypothetical protein | - |
| OF379_RS24895 (OF379_24895) | 3252..3911 | - | 660 | WP_000516222.1 | hypothetical protein | VF |
| OF379_RS24900 (OF379_24900) | 4016..4840 | - | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| OF379_RS24905 (OF379_24905) | 5396..6052 | - | 657 | WP_000972912.1 | hypothetical protein | - |
| OF379_RS24910 (OF379_24910) | 6156..6620 | - | 465 | WP_001293142.1 | H-NS family nucleoid-associated regulatory protein | - |
| OF379_RS24915 (OF379_24915) | 6638..6844 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| OF379_RS24920 (OF379_24920) | 6841..8994 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| OF379_RS24925 (OF379_24925) | 9006..9593 | - | 588 | WP_000275457.1 | DUF6012 family protein | - |
| OF379_RS24930 (OF379_24930) | 9620..9940 | - | 321 | WP_001020837.1 | hypothetical protein | - |
| OF379_RS24935 (OF379_24935) | 10000..10404 | - | 405 | WP_263955276.1 | exodeoxyribonuclease V subunit beta | - |
| OF379_RS24940 (OF379_24940) | 10420..10935 | - | 516 | WP_001218000.1 | thermonuclease family protein | - |
| OF379_RS24945 (OF379_24945) | 10932..11366 | - | 435 | WP_000981210.1 | hypothetical protein | - |
| OF379_RS24950 (OF379_24950) | 11448..11687 | - | 240 | WP_001290043.1 | hypothetical protein | - |
| OF379_RS24955 (OF379_24955) | 11742..12047 | - | 306 | WP_000147047.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OF379_RS24960 (OF379_24960) | 12031..12456 | - | 426 | WP_263955277.1 | cag pathogenicity island Cag12 family protein | - |
| OF379_RS24965 (OF379_24965) | 12465..14327 | - | 1863 | WP_263955278.1 | relaxosome-coupling protein TaxB | - |
| OF379_RS24970 (OF379_24970) | 14314..15342 | - | 1029 | WP_263955279.1 | Type IV secretion system protein VirB11 | VF |
| OF379_RS24975 (OF379_24975) | 15344..16453 | - | 1110 | WP_263955280.1 | Type IV secretion system protein virB10 | VF |
| OF379_RS24980 (OF379_24980) | 16446..17354 | - | 909 | WP_001353735.1 | Type IV secretion system protein virB9 | VF |
| OF379_RS24985 (OF379_24985) | 17351..18037 | - | 687 | WP_001290764.1 | Type IV secretion system protein virB8 | VF |
| OF379_RS24990 (OF379_24990) | 18552..19646 | - | 1095 | WP_001353734.1 | type IV secretion system protein | - |
| OF379_RS24995 (OF379_24995) | 19658..20374 | - | 717 | WP_000832281.1 | type IV secretion system protein | - |
| OF379_RS25000 (OF379_25000) | 20386..23133 | - | 2748 | WP_000105980.1 | Type IV secretion system protein virB4 | VF |
| OF379_RS25005 (OF379_25005) | 23152..23478 | - | 327 | WP_000008644.1 | Type IV secretion system protein virB2 | VF |
| OF379_RS25010 (OF379_25010) | 23492..24112 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| OF379_RS25015 (OF379_25015) | 24469..24684 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| OF379_RS25020 (OF379_25020) | 24681..24974 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OF379_RS25025 (OF379_25025) | 25051..26280 | - | 1230 | WP_016231858.1 | hypothetical protein | Relaxase |
| OF379_RS25030 (OF379_25030) | 26284..26787 | - | 504 | WP_000781814.1 | relaxosome-coupling protein TaxA | - |
| OF379_RS25035 (OF379_25035) | 27150..27497 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OF379_RS25040 (OF379_25040) | 27494..27742 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OF379_RS25045 (OF379_25045) | 28052..28345 | - | 294 | WP_001401669.1 | hypothetical protein | - |
| OF379_RS25050 (OF379_25050) | 28360..28734 | - | 375 | WP_000844303.1 | tail-associated lysozyme | - |
| OF379_RS25055 (OF379_25055) | 28786..29085 | - | 300 | WP_263955274.1 | hypothetical protein | - |
| OF379_RS25060 (OF379_25060) | 29539..29766 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| OF379_RS25065 (OF379_25065) | 29756..30004 | - | 249 | WP_001230706.1 | hypothetical protein | Toxin Detail |
| OF379_RS25070 (OF379_25070) | 30001..30543 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| OF379_RS25075 (OF379_25075) | 30648..31163 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| OF379_RS25080 (OF379_25080) | 31803..32153 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| OF379_RS25085 (OF379_25085) | 32150..32485 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|