MGE detailed information
MGE type: Conjugative plasmid MGE length: 151562 bp
Accession: NZ_CP107285 Location: 1..151562 Organism: Escherichia coli strain SW4848 Replicon: plasmid p152
Accession: NZ_CP107285 Location: 1..151562 Organism: Escherichia coli strain SW4848 Replicon: plasmid p152
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS24040 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| OF379_RS24045 (1263) | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| OF379_RS24050 (2124) | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| OF379_RS24055 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| OF379_RS24060 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| OF379_RS24065 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| OF379_RS24070 (7449) | 7449..7628 | - | 180 | Protein_6 | transposase | - |
| OF379_RS24075 (7767) | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| OF379_RS24080 (9128) | 9128..9453 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| OF379_RS24085 (9499) | 9499..9839 | + | 341 | Protein_9 | IS3 family transposase | - |
| OF379_RS24090 (10434) | 10434..11621 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| OF379_RS24095 (11618) | 11618..13558 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| OF379_RS24100 (13562) | 13562..14932 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| OF379_RS24105 (15406) | 15406..15600 | + | 195 | Protein_13 | IS200-IS605 family transposase IS200C | Transposase |
| OF379_RS24110 (15729) | 15729..16670 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| OF379_RS24115 (16905) | 16905..18294 | - | 1390 | Protein_15 | ISNCY family transposase ISKpn21 | Transposase |
| OF379_RS24120 (18604) | 18604..18753 | - | 150 | Protein_16 | IS3 family transposase IS2 | Transposase |
| OF379_RS24125 (18931) | 18931..20124 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| OF379_RS24135 (23203) | 23203..23496 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| OF379_RS24140 (23554) | 23554..23753 | - | 200 | Protein_20 | lysis protein | - |
| OF379_RS24145 (24307) | 24307..25331 | + | 1025 | Protein_21 | integrase core domain-containing protein | - |
| OF379_RS24150 (26642) | 26642..27757 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| OF379_RS24155 (27897) | 27897..31556 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| OF379_RS24160 (31660) | 31660..32889 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| OF379_RS24165 (32974) | 32974..33930 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| OF379_RS24170 (33975) | 33975..36152 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| OF379_RS24175 (37007) | 37007..38041 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| OF379_RS24180 (38222) | 38222..38523 | + | 302 | Protein_28 | hypothetical protein | - |
| OF379_RS24185 (38601) | 38601..38894 | - | 294 | WP_000269327.1 | DUF6404 family protein | - |
| OF379_RS24190 (39062) | 39062..39187 | - | 126 | Protein_30 | type II toxin-antitoxin system toxin YacB | - |
| OF379_RS24195 (39187) | 39187..39455 | - | 269 | Protein_31 | type II toxin-antitoxin system antitoxin YacA | - |
| OF379_RS24200 (40066) | 40066..41340 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| OF379_RS24205 (41333) | 41333..43429 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| OF379_RS24210 (43599) | 43599..43910 | - | 312 | WP_001259758.1 | colicin V | - |
| OF379_RS24215 (43888) | 43888..44124 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| OF379_RS24220 (44243) | 44243..44605 | + | 363 | WP_263955271.1 | hypothetical protein | - |
| OF379_RS24225 (44609) | 44609..46180 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS24230 (46200) | 46200..46547 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS24235 (46547) | 46547..47224 | - | 678 | WP_001299364.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS24240 (47365) | 47365..47769 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| OF379_RS24245 (47771) | 47771..48040 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| OF379_RS24250 (48037) | 48037..48303 | + | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| OF379_RS24255 (48359) | 48359..48811 | - | 453 | WP_000670963.1 | acyltransferase | - |
| OF379_RS24260 (49104) | 49104..49364 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| OF379_RS24265 (49361) | 49361..49951 | + | 591 | WP_001518980.1 | hypothetical protein | - |
| OF379_RS24270 (50013) | 50013..50228 | - | 216 | Protein_46 | DUF6404 family protein | - |
| OF379_RS24275 (50357) | 50357..50692 | + | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| OF379_RS24280 (50714) | 50714..52594 | - | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| OF379_RS24285 (52780) | 52780..53628 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| OF379_RS24290 (53674) | 53674..53952 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| OF379_RS24295 (53952) | 53952..54221 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| OF379_RS24300 (54865) | 54865..56616 | - | 1752 | Protein_52 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| OF379_RS24305 (56620) | 56620..57012 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| OF379_RS24310 (57150) | 57150..58034 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| OF379_RS24315 (58066) | 58066..59265 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| OF379_RS24320 (59371) | 59371..60021 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| OF379_RS24325 (60053) | 60053..60295 | - | 243 | WP_000844627.1 | transposase | - |
| OF379_RS24330 (60353) | 60353..63319 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| OF379_RS24335 (63323) | 63323..63883 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| OF379_RS24340 (64059) | 64059..64409 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| OF379_RS24345 (64612) | 64612..65625 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| OF379_RS24350 (65781) | 65781..66254 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| OF379_RS24355 (66406) | 66406..67110 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OF379_RS24360 (67176) | 67176..67775 | + | 600 | Protein_64 | replication protein C, IncQ-type | - |
| OF379_RS24365 (68032) | 68032..68847 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| OF379_RS24370 (68908) | 68908..69711 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| OF379_RS24375 (69711) | 69711..70547 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| OF379_RS24380 (70608) | 70608..71312 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OF379_RS24385 (71377) | 71377..72627 | - | 1251 | Protein_69 | transposase | - |
| OF379_RS24390 (72702) | 72702..73370 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| OF379_RS24395 (73406) | 73406..73642 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| OF379_RS24400 (73639) | 73639..74001 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| OF379_RS24405 (74019) | 74019..75713 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| OF379_RS24410 (75765) | 75765..76187 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| OF379_RS24415 (76223) | 76223..76498 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| OF379_RS24420 (76512) | 76512..76862 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| OF379_RS24425 (76934) | 76934..77368 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| OF379_RS24430 (77712) | 77712..78569 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| OF379_RS24435 (78562) | 78562..78636 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| OF379_RS24440 (78861) | 78861..79121 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| OF379_RS24445 (79361) | 79361..79951 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| OF379_RS24450 (79990) | 79990..80199 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| OF379_RS24455 (80245) | 80245..80706 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| OF379_RS24460 (80951) | 80951..81163 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| OF379_RS24465 (81296) | 81296..81856 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| OF379_RS24470 (81959) | 81959..82819 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| OF379_RS24475 (82878) | 82878..83624 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| OF379_RS24480 (83644) | 83644..88914 | - | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| OF379_RS24485 (88914) | 88914..91067 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| OF379_RS24490 (91320) | 91320..92051 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| OF379_RS24495 (92065) | 92065..92574 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| OF379_RS24500 (92571) | 92571..95396 | - | 2826 | WP_001007045.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| OF379_RS24505 (95393) | 95393..96766 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| OF379_RS24510 (96766) | 96766..97128 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| OF379_RS24515 (97058) | 97058..97603 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| OF379_RS24520 (97590) | 97590..97874 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| OF379_RS24525 (97993) | 97993..98340 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| OF379_RS24530 (98356) | 98356..99099 | - | 744 | WP_263955268.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| OF379_RS24535 (99092) | 99092..99349 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| OF379_RS24540 (99376) | 99376..101184 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| OF379_RS24545 (101181) | 101181..101819 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| OF379_RS24550 (101828) | 101828..102820 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| OF379_RS24555 (102817) | 102817..103449 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| OF379_RS24560 (103446) | 103446..103832 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| OF379_RS24565 (103829) | 103829..106456 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| OF379_RS24570 (106616) | 106616..106837 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| OF379_RS24575 (106972) | 106972..107487 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| OF379_RS24580 (107484) | 107484..107735 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| OF379_RS24585 (107747) | 107747..107944 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| OF379_RS24590 (107931) | 107931..108521 | - | 591 | WP_000002796.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| OF379_RS24595 (108511) | 108511..109938 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| OF379_RS24600 (109938) | 109938..110666 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| OF379_RS24605 (110653) | 110653..111219 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| OF379_RS24610 (111241) | 111241..111552 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| OF379_RS24615 (111567) | 111567..111932 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| OF379_RS24620 (111965) | 111965..112366 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| OF379_RS24625 (112459) | 112459..113148 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| OF379_RS24630 (113335) | 113335..113718 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| OF379_RS24635 (114133) | 114133..114642 | + | 510 | WP_000759163.1 | hypothetical protein | VF |
| OF379_RS24640 (114938) | 114938..115759 | - | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| OF379_RS24645 (115878) | 115878..116165 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| OF379_RS24650 (116466) | 116466..116763 | + | 298 | Protein_122 | hypothetical protein | - |
| OF379_RS24655 (117064) | 117064..117186 | - | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| OF379_RS24660 (117131) | 117131..117244 | - | 114 | Protein_124 | DUF5431 family protein | - |
| - (117278) | 117278..117489 | + | 212 | NuclAT_0 | - | - |
| - (117278) | 117278..117489 | - | 212 | NuclAT_0 | - | - |
| - (117278) | 117278..117489 | - | 212 | NuclAT_0 | - | - |
| - (117278) | 117278..117489 | - | 212 | NuclAT_0 | - | - |
| - (117278) | 117278..117489 | - | 212 | NuclAT_0 | - | - |
| OF379_RS24665 (117434) | 117434..118220 | - | 787 | Protein_125 | plasmid SOS inhibition protein A | - |
| OF379_RS24670 (118217) | 118217..118651 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| OF379_RS24675 (118706) | 118706..120664 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| OF379_RS24680 (120728) | 120728..120961 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| OF379_RS24685 (121059) | 121059..121556 | - | 498 | Protein_129 | single-stranded DNA-binding protein | - |
| OF379_RS24690 (121857) | 121857..122276 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| OF379_RS24695 (122362) | 122362..122925 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| OF379_RS24700 (122973) | 122973..124334 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| OF379_RS24705 (124386) | 124386..124616 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| OF379_RS24710 (125133) | 125133..125386 | + | 254 | Protein_134 | hypothetical protein | - |
| OF379_RS24715 (125610) | 125610..125792 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| OF379_RS24720 (125792) | 125792..126253 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| OF379_RS24725 (126253) | 126253..126678 | - | 426 | WP_001198922.1 | antirestriction protein | - |
| OF379_RS24730 (127080) | 127080..128051 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| OF379_RS24735 (128312) | 128312..128524 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| OF379_RS24740 (128537) | 128537..129112 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| OF379_RS24745 (129181) | 129181..129528 | - | 348 | WP_001350917.1 | hypothetical protein | - |
| OF379_RS24750 (129525) | 129525..129694 | - | 170 | Protein_142 | hypothetical protein | - |
| OF379_RS24755 (130159) | 130159..131130 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| OF379_RS24760 (131130) | 131130..132296 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| OF379_RS24770 (133818) | 133818..136019 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| OF379_RS24775 (136045) | 136045..137378 | - | 1334 | Protein_147 | L-lysine N6-monooxygenase | VF |
| OF379_RS24780 (137375) | 137375..139117 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| OF379_RS24785 (139117) | 139117..140064 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| OF379_RS24790 (140065) | 140065..141789 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| OF379_RS24795 (141925) | 141925..143118 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| OF379_RS24800 (143498) | 143498..143878 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| OF379_RS24805 (144219) | 144219..144632 | - | 414 | Protein_153 | phosphopyruvate hydratase | - |
| OF379_RS24810 (144630) | 144630..144887 | + | 258 | Protein_154 | transposase | - |
| OF379_RS24815 (145121) | 145121..145978 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| OF379_RS24820 (145975) | 145975..146832 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| OF379_RS24825 (146829) | 146829..147656 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| OF379_RS24830 (147656) | 147656..148570 | - | 915 | WP_001514243.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| OF379_RS24835 (148926) | 148926..149623 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| OF379_RS24840 (149803) | 149803..150327 | - | 525 | Protein_160 | DUF4113 domain-containing protein | - |
| OF379_RS24845 (150388) | 150388..150492 | - | 105 | Protein_161 | AAA family ATPase | - |
| OF379_RS24850 (150494) | 150494..150817 | - | 324 | Protein_162 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|