MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP107284 Location: 4301146..4317690 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Accession: NZ_CP107284 Location: 4301146..4317690 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS20695 (4297676) | 4297676..4298401 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| OF379_RS20700 (4298438) | 4298438..4298977 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| OF379_RS20705 (4299042) | 4299042..4299590 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| OF379_RS20710 (4300072) | 4300072..4300668 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| OF379_RS20715 (4301146) | 4301146..4301748 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| OF379_RS20720 (4303204) | 4303204..4303920 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OF379_RS20725 (4303940) | 4303940..4305046 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| OF379_RS20730 (4305111) | 4305111..4306091 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OF379_RS20735 (4306201) | 4306201..4306406 | + | 206 | Protein_4058 | HNH endonuclease | - |
| OF379_RS20740 (4306674) | 4306674..4307914 | - | 1241 | Protein_4059 | helicase YjhR | - |
| OF379_RS20745 (4308030) | 4308030..4308161 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| OF379_RS20750 (4308652) | 4308652..4308909 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OF379_RS20755 (4308921) | 4308921..4309466 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OF379_RS20760 (4309522) | 4309522..4310268 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OF379_RS20765 (4310437) | 4310437..4310655 | + | 219 | Protein_4064 | hypothetical protein | - |
| OF379_RS20770 (4310693) | 4310693..4310809 | + | 117 | Protein_4065 | VOC family protein | - |
| OF379_RS20775 (4311054) | 4311054..4312175 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OF379_RS20780 (4312172) | 4312172..4312450 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OF379_RS20785 (4312462) | 4312462..4313775 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OF379_RS20790 (4313788) | 4313788..4314594 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| OF379_RS20795 (4314725) | 4314725..4315156 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| OF379_RS20800 (4315168) | 4315168..4315800 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| OF379_RS20805 (4315817) | 4315817..4316599 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| OF379_RS20810 (4316902) | 4316902..4317690 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| OF379_RS20815 (4317695) | 4317695..4318600 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| OF379_RS20820 (4318611) | 4318611..4320578 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| OF379_RS20825 (4320685) | 4320685..4322034 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|