MGE detailed information
MGE type: Prophage MGE length: 23421 bp
Accession: NZ_CP107284 Location: 2034861..2058281 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Accession: NZ_CP107284 Location: 2034861..2058281 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS09600 () | 2030990..2031631 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OF379_RS09605 () | 2031686..2032864 | - | 1179 | WP_000173460.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OF379_RS09610 () | 2032998..2033288 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| OF379_RS09615 () | 2033355..2033711 | + | 357 | WP_001295500.1 | protein YebF | - |
| OF379_RS09620 () | 2034038..2034697 | + | 660 | WP_000024731.1 | tellurite resistance TerB family protein | - |
| OF379_RS09625 () | 2034861..2036030 | - | 1170 | WP_096972978.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| OF379_RS09630 () | 2036087..2036512 | + | 426 | WP_000064874.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| OF379_RS09635 () | 2036669..2038729 | + | 2061 | WP_000936960.1 | oligopeptidase B | - |
| OF379_RS09640 () | 2038726..2039388 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| OF379_RS09645 () | 2039412..2040068 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| OF379_RS09650 () | 2040170..2040400 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| OF379_RS09655 () | 2040539..2040913 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| OF379_RS09660 () | 2040917..2041789 | + | 873 | WP_263955241.1 | copper homeostasis membrane protein CopD | - |
| OF379_RS09665 () | 2041802..2042143 | + | 342 | WP_000976485.1 | YebY family protein | - |
| - | 2042173..2042441 | - | 269 | - | - | Antitoxin Detail |
| - | 2042300..2042403 | + | 104 | - | - | Toxin Detail |
| OF379_RS09670 () | 2042538..2043194 | + | 657 | WP_001559255.1 | protein-serine/threonine phosphatase | - |
| OF379_RS09675 () | 2043195..2043386 | - | 192 | WP_001296140.1 | YebW family protein | - |
| OF379_RS09680 () | 2043491..2043727 | - | 237 | WP_001295499.1 | YebV family protein | - |
| OF379_RS09685 () | 2043845..2045284 | - | 1440 | WP_024186572.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OF379_RS09690 () | 2045364..2047997 | - | 2634 | WP_001469185.1 | Intermembrane transport protein YebT | VF |
| OF379_RS09695 () | 2047966..2049249 | - | 1284 | WP_001469184.1 | membrane integrity lipid transport subunit YebS | - |
| OF379_RS09700 () | 2049379..2049876 | + | 498 | WP_001043875.1 | L-methionine (R)-S-oxide reductase | - |
| OF379_RS09705 () | 2049973..2050671 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| OF379_RS09710 () | 2050691..2052739 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| OF379_RS09715 () | 2052931..2053812 | + | 882 | WP_000984517.1 | protease HtpX | - |
| OF379_RS09720 () | 2053858..2055231 | - | 1374 | WP_001308706.1 | MFS transporter | - |
| OF379_RS09725 () | 2055408..2056199 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| OF379_RS09730 () | 2056343..2056582 | - | 240 | WP_001211011.1 | YobH family protein | - |
| OF379_RS09735 () | 2056741..2056884 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| OF379_RS09740 () | 2056959..2057246 | + | 288 | WP_001006855.1 | YebO family protein | - |
| OF379_RS09745 () | 2057916..2058059 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| OF379_RS09750 () | 2058072..2058281 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| OF379_RS09755 () | 2058447..2059256 | + | 810 | WP_263955242.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| OF379_RS09760 () | 2059253..2059819 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| OF379_RS09765 () | 2060248..2060706 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| OF379_RS09770 () | 2060761..2061612 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| OF379_RS09775 () | 2061625..2062425 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|