MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93413 bp
Accession: NZ_CP107263 Location: 1..93413 Organism: Leclercia adecarboxylata strain 2022CK-00320 Replicon: plasmid unnamed2
Accession: NZ_CP107263 Location: 1..93413 Organism: Leclercia adecarboxylata strain 2022CK-00320 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5937_RS24460 (N5937_24465) | 1221..2129 | + | 909 | WP_263951696.1 | HNH endonuclease | - |
| N5937_RS24465 (N5937_24470) | 2513..2863 | - | 351 | WP_220436775.1 | DUF305 domain-containing protein | - |
| N5937_RS24470 (N5937_24475) | 3011..3442 | - | 432 | WP_263951688.1 | silver-binding protein SilE | - |
| N5937_RS24475 (N5937_24480) | 3693..5168 | - | 1476 | WP_263951689.1 | copper/silver sensor histidine kinase SilS | - |
| N5937_RS24480 (N5937_24485) | 5161..5841 | - | 681 | WP_023331518.1 | Transcriptional regulatory protein CusR | VF |
| N5937_RS24485 (N5937_24490) | 6031..7416 | + | 1386 | WP_023331517.1 | Cation efflux system protein CusC | VF |
| N5937_RS24490 (N5937_24495) | 7445..7798 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| N5937_RS24495 (N5937_24500) | 7912..9204 | + | 1293 | WP_013087116.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| N5937_RS24500 (N5937_24505) | 9215..12361 | + | 3147 | WP_044865875.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| N5937_RS24505 (N5937_24510) | 12448..12888 | + | 441 | WP_000758228.1 | DUF411 domain-containing protein | - |
| N5937_RS24510 (N5937_24515) | 13015..15462 | + | 2448 | WP_044865872.1 | Ag(+)-translocating P-type ATPase SilP | - |
| N5937_RS24515 (N5937_24520) | 15503..15700 | + | 198 | WP_263951690.1 | DUF2933 domain-containing protein | - |
| N5937_RS24520 (N5937_24525) | 15734..16471 | - | 738 | WP_044865871.1 | Murein DD-endopeptidase MepM | VF |
| N5937_RS24525 (N5937_24530) | 16760..17209 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| N5937_RS24530 (N5937_24535) | 17444..19261 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| N5937_RS24535 (N5937_24540) | 19267..20157 | + | 891 | WP_074133539.1 | copper resistance outer membrane transporter PcoB | - |
| N5937_RS24540 (N5937_24545) | 20197..20577 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| N5937_RS24545 (N5937_24550) | 20582..21511 | + | 930 | WP_220436785.1 | copper resistance inner membrane protein PcoD | - |
| N5937_RS24550 (N5937_24555) | 21566..22246 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| N5937_RS24555 (N5937_24560) | 22243..23643 | + | 1401 | WP_220436786.1 | copper resistance membrane spanning protein PcoS | - |
| N5937_RS24560 (N5937_24565) | 23859..24293 | + | 435 | WP_004388336.1 | copper resistance system metallochaperone PcoE | - |
| N5937_RS24565 (N5937_24570) | 24626..24964 | - | 339 | WP_263951691.1 | hypothetical protein | - |
| N5937_RS24570 (N5937_24575) | 25024..25679 | + | 656 | Protein_23 | IS1 family transposase | - |
| N5937_RS24575 (N5937_24580) | 25904..26205 | - | 302 | Protein_24 | IS3 family transposase | - |
| N5937_RS24580 (N5937_24585) | 26361..27269 | - | 909 | WP_263951692.1 | hypothetical protein | - |
| N5937_RS24585 (N5937_24590) | 27896..29290 | + | 1395 | WP_263951693.1 | VWA domain-containing protein | - |
| N5937_RS24590 (N5937_24595) | 29562..30965 | + | 1404 | WP_263951697.1 | SrfA family protein | - |
| N5937_RS24595 (N5937_24600) | 30966..33968 | + | 3003 | WP_220436030.1 | virulence factor SrfB | - |
| N5937_RS24600 (N5937_24605) | 33968..36616 | + | 2649 | WP_220436029.1 | virulence factor SrfC family protein | - |
| N5937_RS24605 (N5937_24610) | 36623..37588 | + | 966 | WP_220436028.1 | hypothetical protein | - |
| N5937_RS24610 (N5937_24615) | 37598..39553 | + | 1956 | WP_220436027.1 | hypothetical protein | VF |
| N5937_RS24615 (N5937_24620) | 39553..40239 | + | 687 | WP_263951694.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N5937_RS24620 (N5937_24625) | 40271..41452 | + | 1182 | WP_263951698.1 | hypothetical protein | VF |
| N5937_RS24625 (N5937_24630) | 41442..42977 | + | 1536 | WP_220436026.1 | hypothetical protein | VF |
| N5937_RS24630 (N5937_24635) | 43001..43702 | + | 702 | WP_032611725.1 | hypothetical protein | - |
| N5937_RS24635 (N5937_24640) | 43713..44195 | + | 483 | WP_032611727.1 | hypothetical protein | - |
| N5937_RS24640 (N5937_24645) | 44252..44728 | + | 477 | WP_051916005.1 | hypothetical protein | - |
| N5937_RS24645 (N5937_24650) | 44743..45174 | + | 432 | WP_263951695.1 | IrmA family protein | - |
| N5937_RS24650 (N5937_24655) | 46915..48468 | - | 1554 | Protein_39 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| N5937_RS24655 (N5937_24660) | 48465..48851 | + | 387 | Protein_40 | recombinase family protein | - |
| N5937_RS24660 (N5937_24665) | 49027..50232 | + | 1206 | WP_263951678.1 | chromate efflux transporter | - |
| N5937_RS24665 (N5937_24670) | 50243..50548 | + | 306 | WP_094484737.1 | PadR family transcriptional regulator | - |
| N5937_RS24670 (N5937_24675) | 50677..51375 | - | 699 | WP_016151343.1 | arsenical resistance protein ArsH | - |
| N5937_RS24675 (N5937_24680) | 51461..51781 | + | 321 | WP_004206577.1 | transcriptional regulator | - |
| N5937_RS24680 (N5937_24685) | 51826..53115 | + | 1290 | WP_047368891.1 | arsenic transporter | - |
| N5937_RS24685 (N5937_24690) | 53128..53553 | + | 426 | WP_023316432.1 | glutaredoxin-dependent arsenate reductase | - |
| N5937_RS24690 (N5937_24695) | 53833..54474 | + | 642 | WP_263951679.1 | DNA-binding protein | - |
| N5937_RS24695 (N5937_24700) | 55407..55667 | - | 261 | Protein_48 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| N5937_RS24700 (N5937_24705) | 55657..55807 | - | 151 | Protein_49 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| N5937_RS24705 (N5937_24710) | 56078..56563 | - | 486 | WP_263951680.1 | conjugative transfer protein MobI(A/C) | - |
| N5937_RS24710 (N5937_24715) | 58871..59860 | + | 990 | WP_220434810.1 | IS91 family transposase ISWz1 | Transposase |
| N5937_RS24715 (N5937_24720) | 59956..60593 | + | 638 | Protein_52 | IS3 family transposase | - |
| N5937_RS24720 (N5937_24725) | 61026..61108 | + | 83 | Protein_53 | hypothetical protein | - |
| N5937_RS24725 (N5937_24730) | 61144..62226 | + | 1083 | WP_004152286.1 | DNA-binding transcriptional repressor LacI | - |
| N5937_RS24730 (N5937_24735) | 62348..65422 | + | 3075 | WP_263951681.1 | beta-galactosidase | - |
| N5937_RS24735 (N5937_24740) | 65474..66727 | + | 1254 | WP_263951682.1 | lactose permease | - |
| N5937_RS24740 (N5937_24745) | 66793..66933 | + | 141 | Protein_57 | galactoside O-acetyltransferase | - |
| N5937_RS24755 (N5937_24760) | 68668..69216 | + | 549 | WP_263951685.1 | hypothetical protein | - |
| N5937_RS24760 (N5937_24765) | 69837..70085 | + | 249 | WP_213802912.1 | plasmid stabilization protein | Antitoxin Detail |
| N5937_RS24765 (N5937_24770) | 70075..70359 | + | 285 | WP_213802913.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5937_RS24770 (N5937_24775) | 70402..71717 | - | 1316 | Protein_63 | ISNCY family transposase ISCARN112 | Transposase |
| N5937_RS24775 (N5937_24780) | 72012..72232 | - | 221 | Protein_64 | arsenate reductase | - |
| N5937_RS24780 (N5937_24785) | 72513..73052 | + | 540 | Protein_65 | DUF4113 domain-containing protein | - |
| N5937_RS24785 (N5937_24790) | 73399..74370 | - | 972 | WP_213802914.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5937_RS24790 (N5937_24795) | 74370..75536 | - | 1167 | WP_220436768.1 | hypothetical protein | VF |
| N5937_RS24795 (N5937_24800) | 76203..77063 | - | 861 | WP_262658090.1 | replication initiation protein | - |
| N5937_RS24800 (N5937_24805) | 78141..78919 | - | 779 | Protein_69 | site-specific integrase | - |
| N5937_RS24805 (N5937_24810) | 79115..79351 | - | 237 | WP_220436770.1 | hypothetical protein | - |
| N5937_RS24810 (N5937_24815) | 79351..79590 | - | 240 | WP_220436771.1 | hypothetical protein | - |
| N5937_RS24815 (N5937_24820) | 79598..79942 | - | 345 | WP_213802925.1 | hypothetical protein | - |
| N5937_RS24820 (N5937_24825) | 80198..80686 | + | 489 | WP_262658088.1 | hypothetical protein | - |
| N5937_RS24825 (N5937_24830) | 80874..81104 | + | 231 | WP_262658087.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| N5937_RS24830 (N5937_24835) | 81170..81578 | + | 409 | Protein_75 | VapC toxin family PIN domain ribonuclease | - |
| N5937_RS24835 (N5937_24840) | 81775..82197 | + | 423 | WP_262658086.1 | hypothetical protein | - |
| N5937_RS24840 (N5937_24845) | 84068..84268 | + | 201 | WP_263951686.1 | glycogen synthesis protein GlgS | - |
| N5937_RS24845 (N5937_24850) | 85082..85270 | - | 189 | WP_103181190.1 | hypothetical protein | - |
| N5937_RS24850 (N5937_24855) | 85623..86054 | - | 432 | WP_262658084.1 | hypothetical protein | - |
| N5937_RS24855 (N5937_24860) | 87088..87504 | + | 417 | WP_262658082.1 | H-NS family nucleoid-associated regulatory protein | - |
| N5937_RS24860 (N5937_24865) | 88469..88771 | - | 303 | WP_263951687.1 | sigma-S stabilization anti-adapter protein IraP | - |
| N5937_RS24865 (N5937_24870) | 89002..90267 | + | 1266 | WP_263951699.1 | NO-inducible flavohemoprotein | - |
| N5937_RS24870 (N5937_24875) | 90774..91769 | + | 996 | WP_262658079.1 | nucleotidyltransferase | - |
| N5937_RS24875 (N5937_24880) | 91773..92705 | + | 933 | WP_061549452.1 | S-4TM family putative pore-forming effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|