MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62884 bp
Accession: NZ_CP107242 Location: 1..62884 Organism: Xanthomonas hortorum strain Oregano 108 Replicon: plasmid unnamed1
Accession: NZ_CP107242 Location: 1..62884 Organism: Xanthomonas hortorum strain Oregano 108 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OEG85_RS24185 (OEG85_24180) | 59..181 | - | 123 | Protein_0 | XRE family transcriptional regulator | - |
| OEG85_RS24190 (OEG85_24185) | 283..987 | - | 705 | WP_268215267.1 | NYN domain-containing protein | - |
| OEG85_RS24195 (OEG85_24190) | 1269..1730 | + | 462 | WP_268215268.1 | hypothetical protein | - |
| OEG85_RS24200 (OEG85_24195) | 1727..2140 | + | 414 | Protein_3 | Tn3 family transposase ISPsy42 | Transposase |
| OEG85_RS24205 (OEG85_24200) | 2311..2598 | + | 288 | WP_074059064.1 | hypothetical protein | - |
| OEG85_RS24210 (OEG85_24205) | 2664..2969 | + | 306 | WP_174556041.1 | hypothetical protein | - |
| OEG85_RS24215 (OEG85_24210) | 3046..3363 | + | 318 | WP_268215269.1 | hypothetical protein | - |
| OEG85_RS24220 (OEG85_24215) | 5098..5406 | + | 309 | WP_268215270.1 | CcgAII protein | - |
| OEG85_RS24225 (OEG85_24220) | 5571..5918 | + | 348 | WP_268215271.1 | hypothetical protein | - |
| OEG85_RS24230 (OEG85_24225) | 6083..6406 | + | 324 | WP_104622278.1 | hypothetical protein | - |
| OEG85_RS24235 (OEG85_24230) | 7042..7311 | + | 270 | WP_019238183.1 | hypothetical protein | - |
| OEG85_RS24240 (OEG85_24235) | 7829..8014 | + | 186 | WP_268215288.1 | hypothetical protein | - |
| OEG85_RS24245 | 8453..9751 | + | 1299 | WP_268215285.1 | hypothetical protein | - |
| OEG85_RS24250 (OEG85_24245) | 10195..10449 | - | 255 | WP_180316231.1 | hypothetical protein | - |
| OEG85_RS24255 (OEG85_24250) | 10462..10707 | - | 246 | WP_228329247.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| OEG85_RS24260 (OEG85_24255) | 10774..12228 | - | 1455 | WP_268215272.1 | P-type conjugative transfer protein TrbL | - |
| OEG85_RS24265 (OEG85_24260) | 12225..12455 | - | 231 | WP_268215273.1 | entry exclusion lipoprotein TrbK | - |
| OEG85_RS24270 (OEG85_24265) | 12468..13253 | - | 786 | WP_180316227.1 | P-type conjugative transfer protein TrbJ | - |
| OEG85_RS24275 (OEG85_24270) | 13425..13805 | - | 381 | WP_268215274.1 | hypothetical protein | - |
| OEG85_RS24280 (OEG85_24275) | 14015..14383 | + | 369 | WP_268215275.1 | hypothetical protein | Relaxase |
| OEG85_RS24285 (OEG85_24280) | 14380..16272 | + | 1893 | WP_268215276.1 | hypothetical protein | - |
| OEG85_RS24290 (OEG85_24285) | 16288..16596 | + | 309 | WP_180316223.1 | hypothetical protein | - |
| OEG85_RS24295 (OEG85_24290) | 16611..16868 | - | 258 | WP_180316222.1 | XRE family transcriptional regulator | - |
| OEG85_RS24300 (OEG85_24295) | 16881..17174 | - | 294 | WP_268215277.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OEG85_RS24305 (OEG85_24300) | 17162..17434 | - | 273 | WP_231673701.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| OEG85_RS24310 (OEG85_24305) | 17670..17906 | + | 237 | WP_268215278.1 | hypothetical protein | - |
| OEG85_RS24315 (OEG85_24310) | 17896..18543 | + | 648 | WP_268215279.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OEG85_RS24320 (OEG85_24315) | 18540..18677 | + | 138 | WP_208591887.1 | hypothetical protein | - |
| OEG85_RS24325 (OEG85_24320) | 18789..19421 | + | 633 | WP_002804299.1 | ParA family protein | - |
| OEG85_RS24330 (OEG85_24325) | 19414..19776 | + | 363 | WP_268215280.1 | hypothetical protein | - |
| OEG85_RS24335 (OEG85_24330) | 19859..20182 | + | 324 | WP_002804301.1 | ParC family partition-associated protein | - |
| OEG85_RS24340 (OEG85_24335) | 20373..21818 | + | 1446 | WP_268215281.1 | replication protein | - |
| OEG85_RS24345 (OEG85_24340) | 22066..22377 | + | 312 | WP_268215282.1 | hypothetical protein | - |
| OEG85_RS24350 (OEG85_24345) | 22647..22832 | - | 186 | Protein_33 | type IV secretory system conjugative DNA transfer family protein | - |
| OEG85_RS24355 (OEG85_24350) | 23039..23248 | - | 210 | Protein_34 | hypothetical protein | - |
| OEG85_RS24360 (OEG85_24355) | 23359..23802 | - | 444 | WP_044474917.1 | hypothetical protein | - |
| OEG85_RS24365 (OEG85_24360) | 23811..24086 | - | 276 | Protein_36 | integrase core domain-containing protein | - |
| OEG85_RS24370 (OEG85_24365) | 24108..27554 | - | 3447 | WP_268215283.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| OEG85_RS24375 | 29151..29930 | + | 780 | Protein_38 | hypothetical protein | - |
| OEG85_RS24380 (OEG85_24375) | 30542..30982 | + | 441 | WP_268215284.1 | hypothetical protein | - |
| OEG85_RS24385 (OEG85_24380) | 31077..31265 | + | 189 | WP_233367059.1 | carbon storage regulator CsrA | - |
| OEG85_RS24390 (OEG85_24385) | 31594..32415 | + | 822 | WP_268215256.1 | hypothetical protein | - |
| OEG85_RS24395 (OEG85_24390) | 33862..34566 | + | 705 | WP_268215257.1 | DNA-binding protein | - |
| OEG85_RS24400 (OEG85_24395) | 34690..35328 | + | 639 | WP_116887269.1 | ParA family partition ATPase | - |
| OEG85_RS24405 (OEG85_24400) | 35325..35657 | + | 333 | WP_116891171.1 | hypothetical protein | - |
| OEG85_RS24410 (OEG85_24405) | 35930..36394 | + | 465 | WP_268215286.1 | DUF2840 domain-containing protein | - |
| OEG85_RS24415 (OEG85_24410) | 36399..36995 | + | 597 | WP_268215258.1 | signal peptidase I | - |
| OEG85_RS24420 (OEG85_24415) | 36988..37578 | + | 591 | WP_268215259.1 | hypothetical protein | VF |
| OEG85_RS24425 (OEG85_24420) | 37880..40834 | + | 2955 | WP_268215260.1 | hypothetical protein | Relaxase |
| OEG85_RS24430 (OEG85_24425) | 40839..42896 | + | 2058 | WP_268215261.1 | hypothetical protein | VF |
| OEG85_RS24435 (OEG85_24430) | 42893..43384 | + | 492 | WP_006451398.1 | hypothetical protein | - |
| OEG85_RS24440 (OEG85_24435) | 43417..43956 | + | 540 | WP_019238169.1 | plasmid pRiA4b ORF-3 family protein | - |
| OEG85_RS24445 (OEG85_24440) | 44052..44444 | + | 393 | WP_046932102.1 | hypothetical protein | - |
| OEG85_RS24450 (OEG85_24445) | 44957..45778 | + | 822 | WP_046932104.1 | hypothetical protein | - |
| OEG85_RS24455 (OEG85_24450) | 46461..46742 | - | 282 | WP_019238166.1 | helix-turn-helix domain-containing protein | - |
| OEG85_RS24460 (OEG85_24455) | 46739..47074 | - | 336 | WP_046932105.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OEG85_RS24465 (OEG85_24460) | 47426..47635 | + | 210 | WP_170914380.1 | helix-turn-helix transcriptional regulator | - |
| OEG85_RS24470 (OEG85_24465) | 47725..48732 | + | 1008 | WP_268215262.1 | Putative conjugal transfer protein | VF |
| OEG85_RS24475 (OEG85_24470) | 48811..49125 | + | 315 | WP_228329186.1 | TrbC/VirB2 family protein | - |
| OEG85_RS24480 (OEG85_24475) | 49128..49394 | + | 267 | WP_047709438.1 | VirB3 family type IV secretion system protein | - |
| OEG85_RS24485 (OEG85_24480) | 49461..52031 | + | 2571 | WP_268215263.1 | DUF853 family protein | - |
| OEG85_RS24490 (OEG85_24485) | 52050..52835 | + | 786 | WP_046932125.1 | conjugal transfer protein | - |
| OEG85_RS24495 (OEG85_24490) | 53203..53556 | + | 354 | WP_127172325.1 | hypothetical protein | - |
| OEG85_RS24500 (OEG85_24495) | 53615..55093 | + | 1479 | WP_268215264.1 | P-type conjugative transfer protein TrbL | - |
| OEG85_RS24505 (OEG85_24500) | 55100..55810 | + | 711 | WP_230433576.1 | conjugal transfer protein TrbF | - |
| OEG85_RS24510 (OEG85_24505) | 55836..56828 | + | 993 | WP_046932111.1 | P-type conjugative transfer protein TrbG | - |
| OEG85_RS24515 (OEG85_24510) | 56844..58187 | + | 1344 | WP_046932113.1 | TrbI/VirB10 family protein | - |
| OEG85_RS24520 (OEG85_24515) | 58258..58566 | + | 309 | WP_230433578.1 | hypothetical protein | - |
| OEG85_RS24525 (OEG85_24520) | 58577..58816 | + | 240 | WP_075287821.1 | hypothetical protein | - |
| OEG85_RS24530 (OEG85_24525) | 58889..59137 | + | 249 | WP_019238153.1 | hypothetical protein | - |
| OEG85_RS24535 (OEG85_24530) | 59140..61317 | + | 2178 | WP_268215287.1 | DNA topoisomerase III | - |
| OEG85_RS24540 (OEG85_24535) | 61499..61696 | + | 198 | WP_223647137.1 | hypothetical protein | - |
| OEG85_RS24545 (OEG85_24540) | 61712..62341 | + | 630 | WP_268215265.1 | hypothetical protein | - |
| OEG85_RS24550 (OEG85_24545) | 62354..62536 | + | 183 | WP_268215266.1 | hypothetical protein | - |
| OEG85_RS24555 (OEG85_24550) | 62569..62754 | + | 186 | WP_104567858.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|