MGE detailed information
MGE type: Prophage MGE length: 67138 bp
Accession: NZ_CP107111 Location: 1684480..1751617 Organism: Clostridioides difficile strain R_cdtRstop4.2 Replicon: chromosome
Accession: NZ_CP107111 Location: 1684480..1751617 Organism: Clostridioides difficile strain R_cdtRstop4.2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGM31_RS07840 (OGM31_07840) | 1679585..1680346 | + | 762 | WP_009889424.1 | SprT family zinc-dependent metalloprotease | - |
| OGM31_RS07845 (OGM31_07845) | 1680877..1681116 | + | 240 | WP_003429800.1 | ACT domain-containing protein | - |
| OGM31_RS07850 (OGM31_07850) | 1681386..1682381 | + | 996 | WP_012816147.1 | ketol-acid reductoisomerase | - |
| OGM31_RS07855 (OGM31_07855) | 1682434..1684122 | + | 1689 | WP_009888799.1 | biosynthetic-type acetolactate synthase large subunit | - |
| OGM31_RS07860 (OGM31_07860) | 1684480..1685610 | - | 1131 | WP_003429803.1 | site-specific integrase | - |
| OGM31_RS07865 (OGM31_07865) | 1685689..1686396 | - | 708 | WP_009888800.1 | HIRAN domain-containing protein | - |
| OGM31_RS07870 (OGM31_07870) | 1686409..1687278 | - | 870 | WP_009888801.1 | HipA domain-containing protein | - |
| OGM31_RS07875 (OGM31_07875) | 1687898..1688404 | - | 507 | WP_003429804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| OGM31_RS07880 (OGM31_07880) | 1688480..1689028 | - | 549 | WP_009893126.1 | helix-turn-helix transcriptional regulator | - |
| OGM31_RS07885 (OGM31_07885) | 1689040..1689381 | - | 342 | WP_009888806.1 | XRE family transcriptional regulator | - |
| OGM31_RS07890 (OGM31_07890) | 1689558..1689761 | + | 204 | WP_009893129.1 | helix-turn-helix domain-containing protein | - |
| OGM31_RS07895 (OGM31_07895) | 1689809..1690618 | + | 810 | WP_009888810.1 | phage antirepressor | - |
| OGM31_RS07900 (OGM31_07900) | 1690665..1690874 | + | 210 | WP_009888812.1 | hypothetical protein | - |
| OGM31_RS07905 (OGM31_07905) | 1690884..1691258 | - | 375 | WP_003433505.1 | DUF6173 family protein | - |
| OGM31_RS07910 (OGM31_07910) | 1691334..1691531 | + | 198 | WP_009888813.1 | helix-turn-helix transcriptional regulator | - |
| OGM31_RS07915 (OGM31_07915) | 1691562..1691954 | + | 393 | WP_009888815.1 | helix-turn-helix domain-containing protein | - |
| OGM31_RS07920 (OGM31_07920) | 1691941..1692084 | + | 144 | WP_009888817.1 | hypothetical protein | - |
| OGM31_RS07925 (OGM31_07925) | 1692155..1692592 | + | 438 | WP_003433513.1 | hypothetical protein | - |
| OGM31_RS07930 (OGM31_07930) | 1692604..1693770 | + | 1167 | WP_009888818.1 | DUF2800 domain-containing protein | - |
| OGM31_RS07935 (OGM31_07935) | 1693785..1694120 | + | 336 | WP_009888819.1 | hypothetical protein | - |
| OGM31_RS07940 (OGM31_07940) | 1694173..1694745 | + | 573 | WP_003429822.1 | sigma factor | - |
| OGM31_RS07945 (OGM31_07945) | 1694768..1695340 | + | 573 | WP_003433516.1 | DUF2815 family protein | - |
| OGM31_RS07950 (OGM31_07950) | 1695340..1697298 | + | 1959 | WP_009888821.1 | DNA polymerase | - |
| OGM31_RS07955 (OGM31_07955) | 1697310..1699727 | + | 2418 | WP_009888822.1 | virulence-associated E family protein | - |
| OGM31_RS07960 (OGM31_07960) | 1700009..1700335 | + | 327 | WP_003433522.1 | VRR-NUC domain-containing protein | - |
| OGM31_RS07965 (OGM31_07965) | 1700284..1701654 | + | 1371 | WP_009888823.1 | DEAD/DEAH box helicase | - |
| OGM31_RS07970 (OGM31_07970) | 1701678..1701815 | + | 138 | WP_009888824.1 | hypothetical protein | - |
| OGM31_RS07975 (OGM31_07975) | 1701808..1702287 | + | 480 | WP_009888825.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OGM31_RS07980 (OGM31_07980) | 1702570..1703022 | + | 453 | WP_009888826.1 | phage antirepressor | - |
| OGM31_RS07985 (OGM31_07985) | 1703314..1704288 | + | 975 | WP_009888827.1 | hypothetical protein | - |
| OGM31_RS07990 (OGM31_07990) | 1704309..1704818 | + | 510 | WP_003429834.1 | hypothetical protein | - |
| OGM31_RS07995 (OGM31_07995) | 1704888..1705580 | + | 693 | WP_009888829.1 | phage terminase small subunit | - |
| OGM31_RS08000 (OGM31_08000) | 1705570..1706811 | + | 1242 | WP_009888830.1 | PBSX family phage terminase large subunit | - |
| OGM31_RS08005 (OGM31_08005) | 1706817..1708259 | + | 1443 | WP_009888831.1 | phage portal protein | - |
| OGM31_RS08010 (OGM31_08010) | 1708249..1709784 | + | 1536 | WP_009893134.1 | minor capsid protein | - |
| OGM31_RS08015 (OGM31_08015) | 1709786..1710034 | + | 249 | WP_009888832.1 | hypothetical protein | - |
| OGM31_RS08020 (OGM31_08020) | 1710102..1710665 | + | 564 | WP_009888833.1 | phage scaffolding protein | - |
| OGM31_RS08025 (OGM31_08025) | 1710677..1711567 | + | 891 | WP_009888834.1 | hypothetical protein | - |
| OGM31_RS08030 (OGM31_08030) | 1711586..1711819 | + | 234 | WP_009888835.1 | hypothetical protein | - |
| OGM31_RS08035 (OGM31_08035) | 1711829..1712230 | + | 402 | WP_009888836.1 | hypothetical protein | - |
| OGM31_RS08040 (OGM31_08040) | 1712224..1712571 | + | 348 | WP_003433540.1 | hypothetical protein | - |
| OGM31_RS08045 (OGM31_08045) | 1712571..1712861 | + | 291 | WP_009893135.1 | HK97 gp10 family phage protein | - |
| OGM31_RS08050 (OGM31_08050) | 1712971..1713777 | + | 807 | WP_009888838.1 | hypothetical protein | - |
| OGM31_RS08055 (OGM31_08055) | 1714126..1714563 | + | 438 | WP_009888839.1 | hypothetical protein | - |
| OGM31_RS08060 (OGM31_08060) | 1714556..1714732 | + | 177 | WP_009888840.1 | hypothetical protein | - |
| OGM31_RS08065 (OGM31_08065) | 1714733..1716043 | + | 1311 | WP_009893136.1 | phage tail sheath family protein | - |
| OGM31_RS08070 (OGM31_08070) | 1716060..1716530 | + | 471 | WP_009888842.1 | phage tail tube protein | - |
| OGM31_RS08075 (OGM31_08075) | 1716589..1717416 | + | 828 | WP_009888843.1 | hypothetical protein | - |
| OGM31_RS08080 (OGM31_08080) | 1717488..1717928 | + | 441 | WP_003429853.1 | phage portal protein | - |
| OGM31_RS08085 (OGM31_08085) | 1718269..1718430 | + | 162 | WP_003429855.1 | hypothetical protein | Toxin Detail |
| - | 1718350..1718489 | - | 140 | - | - | Antitoxin Detail |
| OGM31_RS08090 (OGM31_08090) | 1719767..1719955 | + | 189 | WP_003429858.1 | hypothetical protein | - |
| OGM31_RS08095 (OGM31_08095) | 1720074..1720940 | + | 867 | WP_009888845.1 | BRO family protein | - |
| OGM31_RS08100 (OGM31_08100) | 1720993..1721127 | + | 135 | WP_009888846.1 | hypothetical protein | - |
| OGM31_RS08105 (OGM31_08105) | 1721805..1722332 | + | 528 | WP_009888847.1 | DUF4352 domain-containing protein | - |
| OGM31_RS08110 (OGM31_08110) | 1722470..1723237 | + | 768 | WP_009888848.1 | DUF4428 domain-containing protein | - |
| OGM31_RS08115 (OGM31_08115) | 1723303..1725675 | + | 2373 | WP_009893138.1 | tape measure protein | - |
| OGM31_RS08120 (OGM31_08120) | 1725692..1726381 | + | 690 | WP_009888849.1 | LysM peptidoglycan-binding domain-containing protein | - |
| OGM31_RS08125 (OGM31_08125) | 1726374..1728266 | + | 1893 | WP_009893140.1 | NlpC/P60 family protein | - |
| OGM31_RS08130 (OGM31_08130) | 1728280..1728540 | + | 261 | WP_009893142.1 | DUF2577 domain-containing protein | - |
| OGM31_RS08135 (OGM31_08135) | 1728545..1728964 | + | 420 | WP_009888851.1 | DUF2634 domain-containing protein | - |
| OGM31_RS08140 (OGM31_08140) | 1728965..1730014 | + | 1050 | WP_009888852.1 | baseplate J/gp47 family protein | - |
| OGM31_RS08145 (OGM31_08145) | 1730007..1730624 | + | 618 | WP_003433579.1 | YmfQ family protein | - |
| OGM31_RS08150 (OGM31_08150) | 1730636..1731661 | + | 1026 | WP_009888853.1 | phage tail protein | - |
| OGM31_RS08155 (OGM31_08155) | 1731678..1733204 | + | 1527 | WP_009893144.1 | hypothetical protein | - |
| OGM31_RS08160 (OGM31_08160) | 1733219..1733512 | + | 294 | WP_009889429.1 | hypothetical protein | - |
| OGM31_RS08165 (OGM31_08165) | 1733512..1733694 | + | 183 | WP_009889431.1 | hypothetical protein | - |
| OGM31_RS08170 (OGM31_08170) | 1733728..1734294 | + | 567 | WP_009889434.1 | hypothetical protein | - |
| OGM31_RS08175 (OGM31_08175) | 1734325..1734615 | + | 291 | WP_009889435.1 | hypothetical protein | - |
| OGM31_RS08180 (OGM31_08180) | 1734619..1734876 | + | 258 | WP_009889440.1 | phage holin family protein | - |
| OGM31_RS08185 (OGM31_08185) | 1735137..1736000 | + | 864 | WP_003429958.1 | Abi family protein | - |
| OGM31_RS08190 (OGM31_08190) | 1736079..1736891 | + | 813 | WP_009889444.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OGM31_RS08195 (OGM31_08195) | 1736985..1739384 | + | 2400 | WP_009893147.1 | cell wall-binding repeat-containing protein | - |
| OGM31_RS08200 (OGM31_08200) | 1739425..1739610 | - | 186 | WP_003433687.1 | hypothetical protein | - |
| OGM31_RS08205 (OGM31_08205) | 1739839..1739967 | - | 129 | WP_003433683.1 | hypothetical protein | - |
| OGM31_RS08210 (OGM31_08210) | 1740305..1740982 | + | 678 | WP_009889448.1 | manganese catalase family protein | - |
| OGM31_RS08215 (OGM31_08215) | 1741156..1743192 | + | 2037 | WP_009889450.1 | thioredoxin domain-containing protein | - |
| OGM31_RS08220 (OGM31_08220) | 1743383..1743949 | - | 567 | WP_009889452.1 | MarR family transcriptional regulator | - |
| OGM31_RS08225 (OGM31_08225) | 1744233..1744769 | + | 537 | WP_009889454.1 | alpha/beta fold hydrolase | - |
| OGM31_RS08230 (OGM31_08230) | 1745401..1745499 | + | 99 | Protein_1534 | transposase | - |
| OGM31_RS08235 (OGM31_08235) | 1745501..1746618 | + | 1118 | Protein_1535 | IS200/IS605 family element RNA-guided endonuclease TnpB | - |
| OGM31_RS08240 (OGM31_08240) | 1746737..1747144 | + | 408 | Protein_1536 | alpha/beta hydrolase | - |
| OGM31_RS08245 (OGM31_08245) | 1747609..1748823 | + | 1215 | WP_009893153.1 | helix-turn-helix transcriptional regulator | - |
| OGM31_RS08250 (OGM31_08250) | 1749243..1749764 | - | 522 | WP_009889468.1 | GNAT family N-acetyltransferase | - |
| OGM31_RS08255 (OGM31_08255) | 1750120..1750917 | + | 798 | WP_003436560.1 | 3D domain-containing protein | - |
| OGM31_RS08260 (OGM31_08260) | 1751027..1751617 | + | 591 | WP_009893156.1 | SGNH/GDSL hydrolase family protein | - |
| OGM31_RS08265 (OGM31_08265) | 1751683..1753380 | + | 1698 | WP_009893157.1 | phospho-sugar mutase | - |
| OGM31_RS08270 (OGM31_08270) | 1753594..1754433 | + | 840 | WP_003436555.1 | YihY/virulence factor BrkB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|