MGE detailed information
MGE type: Prophage MGE length: 66439 bp
Accession: NZ_CP107108 Location: 1712761..1779199 Organism: Clostridioides difficile strain R_phiCD75-3 Replicon: chromosome
Accession: NZ_CP107108 Location: 1712761..1779199 Organism: Clostridioides difficile strain R_phiCD75-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OGM26_RS08075 (OGM26_08075) | 1707866..1708627 | + | 762 | WP_009889424.1 | SprT family zinc-dependent metalloprotease | - |
| OGM26_RS08080 (OGM26_08080) | 1709158..1709397 | + | 240 | WP_003429800.1 | ACT domain-containing protein | - |
| OGM26_RS08085 (OGM26_08085) | 1709667..1710662 | + | 996 | WP_012816147.1 | ketol-acid reductoisomerase | - |
| OGM26_RS08090 (OGM26_08090) | 1710715..1712403 | + | 1689 | WP_009888799.1 | biosynthetic-type acetolactate synthase large subunit | - |
| OGM26_RS08095 (OGM26_08095) | 1712761..1713891 | - | 1131 | WP_003429803.1 | site-specific integrase | - |
| OGM26_RS08100 (OGM26_08100) | 1713970..1714677 | - | 708 | WP_009888800.1 | HIRAN domain-containing protein | - |
| OGM26_RS08105 (OGM26_08105) | 1714690..1715559 | - | 870 | WP_009888801.1 | HipA domain-containing protein | - |
| OGM26_RS08110 (OGM26_08110) | 1716179..1716685 | - | 507 | WP_003429804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| OGM26_RS08115 (OGM26_08115) | 1716761..1717309 | - | 549 | WP_009893126.1 | helix-turn-helix transcriptional regulator | - |
| OGM26_RS08120 (OGM26_08120) | 1717321..1717662 | - | 342 | WP_009888806.1 | XRE family transcriptional regulator | - |
| OGM26_RS08125 (OGM26_08125) | 1717839..1718042 | + | 204 | WP_009893129.1 | helix-turn-helix domain-containing protein | - |
| OGM26_RS08130 (OGM26_08130) | 1718090..1718899 | + | 810 | WP_009888810.1 | phage antirepressor | - |
| OGM26_RS08135 (OGM26_08135) | 1718946..1719155 | + | 210 | WP_009888812.1 | hypothetical protein | - |
| OGM26_RS08140 (OGM26_08140) | 1719165..1719539 | - | 375 | WP_003433505.1 | DUF6173 family protein | - |
| OGM26_RS08145 (OGM26_08145) | 1719615..1719812 | + | 198 | WP_009888813.1 | helix-turn-helix transcriptional regulator | - |
| OGM26_RS08150 (OGM26_08150) | 1719843..1720235 | + | 393 | WP_009888815.1 | helix-turn-helix domain-containing protein | - |
| OGM26_RS08155 (OGM26_08155) | 1720216..1720365 | + | 150 | WP_003429817.1 | hypothetical protein | - |
| OGM26_RS08160 (OGM26_08160) | 1720436..1720873 | + | 438 | WP_003433513.1 | hypothetical protein | - |
| OGM26_RS08165 (OGM26_08165) | 1720885..1722051 | + | 1167 | WP_009888818.1 | DUF2800 domain-containing protein | - |
| OGM26_RS08170 (OGM26_08170) | 1722066..1722401 | + | 336 | WP_009888819.1 | hypothetical protein | - |
| OGM26_RS08175 (OGM26_08175) | 1722454..1723026 | + | 573 | WP_003429822.1 | sigma factor | - |
| OGM26_RS08180 (OGM26_08180) | 1723049..1723621 | + | 573 | WP_003433516.1 | DUF2815 family protein | - |
| OGM26_RS08185 (OGM26_08185) | 1723621..1725579 | + | 1959 | WP_009888821.1 | DNA polymerase | - |
| OGM26_RS08190 (OGM26_08190) | 1725591..1728008 | + | 2418 | WP_009888822.1 | virulence-associated E family protein | - |
| OGM26_RS08195 (OGM26_08195) | 1728290..1728616 | + | 327 | WP_003433522.1 | VRR-NUC domain-containing protein | - |
| OGM26_RS08200 (OGM26_08200) | 1728565..1729935 | + | 1371 | WP_009888823.1 | DEAD/DEAH box helicase | - |
| OGM26_RS08205 (OGM26_08205) | 1729959..1730096 | + | 138 | WP_009888824.1 | hypothetical protein | - |
| OGM26_RS08210 (OGM26_08210) | 1730089..1730568 | + | 480 | WP_009888825.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OGM26_RS08215 (OGM26_08215) | 1730851..1731303 | + | 453 | WP_009888826.1 | phage antirepressor | - |
| OGM26_RS08220 (OGM26_08220) | 1731595..1732569 | + | 975 | WP_009888827.1 | hypothetical protein | - |
| OGM26_RS08225 (OGM26_08225) | 1732590..1733099 | + | 510 | WP_003429834.1 | hypothetical protein | - |
| OGM26_RS08230 (OGM26_08230) | 1733169..1733861 | + | 693 | WP_009888829.1 | phage terminase small subunit | - |
| OGM26_RS08235 (OGM26_08235) | 1733839..1735092 | + | 1254 | WP_012816148.1 | PBSX family phage terminase large subunit | - |
| OGM26_RS08240 (OGM26_08240) | 1735098..1736540 | + | 1443 | WP_009888831.1 | phage portal protein | - |
| OGM26_RS08245 (OGM26_08245) | 1736530..1738065 | + | 1536 | WP_009893134.1 | minor capsid protein | - |
| OGM26_RS08250 (OGM26_08250) | 1738067..1738315 | + | 249 | WP_009888832.1 | hypothetical protein | - |
| OGM26_RS08255 (OGM26_08255) | 1738383..1738946 | + | 564 | WP_009888833.1 | phage scaffolding protein | - |
| OGM26_RS08260 (OGM26_08260) | 1738958..1739848 | + | 891 | WP_009888834.1 | hypothetical protein | - |
| OGM26_RS08265 (OGM26_08265) | 1739867..1740100 | + | 234 | WP_009888835.1 | hypothetical protein | - |
| OGM26_RS08270 (OGM26_08270) | 1740110..1740511 | + | 402 | WP_009888836.1 | hypothetical protein | - |
| OGM26_RS08275 (OGM26_08275) | 1740505..1740852 | + | 348 | WP_003433540.1 | hypothetical protein | - |
| OGM26_RS08280 (OGM26_08280) | 1740852..1741142 | + | 291 | WP_009893135.1 | HK97 gp10 family phage protein | - |
| OGM26_RS08285 (OGM26_08285) | 1741252..1742058 | + | 807 | WP_009888838.1 | hypothetical protein | - |
| OGM26_RS08290 (OGM26_08290) | 1742407..1742844 | + | 438 | WP_009888839.1 | hypothetical protein | - |
| OGM26_RS08295 (OGM26_08295) | 1742837..1743013 | + | 177 | WP_009888840.1 | hypothetical protein | - |
| OGM26_RS08300 (OGM26_08300) | 1743014..1744324 | + | 1311 | WP_009893136.1 | phage tail sheath family protein | - |
| OGM26_RS08305 (OGM26_08305) | 1744341..1744811 | + | 471 | WP_009888842.1 | phage tail tube protein | - |
| OGM26_RS08310 (OGM26_08310) | 1744870..1745697 | + | 828 | WP_009888843.1 | hypothetical protein | - |
| OGM26_RS08315 (OGM26_08315) | 1745769..1746209 | + | 441 | WP_003429853.1 | phage portal protein | - |
| OGM26_RS08320 (OGM26_08320) | 1746550..1746711 | + | 162 | WP_003429855.1 | hypothetical protein | Toxin Detail |
| - | 1746631..1746770 | - | 140 | - | - | Antitoxin Detail |
| OGM26_RS08325 (OGM26_08325) | 1748048..1748236 | + | 189 | WP_003429858.1 | hypothetical protein | - |
| OGM26_RS08330 (OGM26_08330) | 1748355..1749221 | + | 867 | WP_009888845.1 | BRO family protein | - |
| OGM26_RS08335 (OGM26_08335) | 1749274..1749408 | + | 135 | WP_009888846.1 | hypothetical protein | - |
| OGM26_RS08340 (OGM26_08340) | 1750086..1750613 | + | 528 | WP_009888847.1 | DUF4352 domain-containing protein | - |
| OGM26_RS08345 (OGM26_08345) | 1750751..1751518 | + | 768 | WP_009888848.1 | DUF4428 domain-containing protein | - |
| OGM26_RS08350 (OGM26_08350) | 1751584..1753956 | + | 2373 | WP_009893138.1 | tape measure protein | - |
| OGM26_RS08355 (OGM26_08355) | 1753973..1754662 | + | 690 | WP_009888849.1 | LysM peptidoglycan-binding domain-containing protein | - |
| OGM26_RS08360 (OGM26_08360) | 1754655..1756547 | + | 1893 | WP_009893140.1 | NlpC/P60 family protein | - |
| OGM26_RS08365 (OGM26_08365) | 1756561..1756821 | + | 261 | WP_009893142.1 | DUF2577 domain-containing protein | - |
| OGM26_RS08370 (OGM26_08370) | 1756826..1757245 | + | 420 | WP_009888851.1 | DUF2634 domain-containing protein | - |
| OGM26_RS08375 (OGM26_08375) | 1757246..1758295 | + | 1050 | WP_009888852.1 | baseplate J/gp47 family protein | - |
| OGM26_RS08380 (OGM26_08380) | 1758288..1758905 | + | 618 | WP_003433579.1 | YmfQ family protein | - |
| OGM26_RS08385 (OGM26_08385) | 1758917..1759942 | + | 1026 | WP_009888853.1 | phage tail protein | - |
| OGM26_RS08390 (OGM26_08390) | 1759959..1761485 | + | 1527 | WP_009893144.1 | hypothetical protein | - |
| OGM26_RS08395 (OGM26_08395) | 1761500..1761793 | + | 294 | WP_009889429.1 | hypothetical protein | - |
| OGM26_RS08400 (OGM26_08400) | 1761793..1761975 | + | 183 | WP_009889431.1 | hypothetical protein | - |
| OGM26_RS08405 (OGM26_08405) | 1762009..1762575 | + | 567 | WP_009889434.1 | hypothetical protein | - |
| OGM26_RS08410 (OGM26_08410) | 1762606..1762896 | + | 291 | WP_009889435.1 | hypothetical protein | - |
| OGM26_RS08415 (OGM26_08415) | 1762900..1763157 | + | 258 | WP_009889440.1 | phage holin family protein | - |
| OGM26_RS08420 (OGM26_08420) | 1763418..1764281 | + | 864 | WP_003429958.1 | Abi family protein | - |
| OGM26_RS08425 (OGM26_08425) | 1764360..1765172 | + | 813 | WP_009889444.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OGM26_RS08430 (OGM26_08430) | 1765266..1767665 | + | 2400 | WP_009893147.1 | cell wall-binding repeat-containing protein | - |
| OGM26_RS08435 (OGM26_08435) | 1767706..1767891 | - | 186 | WP_003433687.1 | hypothetical protein | - |
| OGM26_RS08440 (OGM26_08440) | 1768120..1768248 | - | 129 | WP_003433683.1 | hypothetical protein | - |
| OGM26_RS08445 (OGM26_08445) | 1768586..1769263 | + | 678 | WP_009889448.1 | manganese catalase family protein | - |
| OGM26_RS08450 (OGM26_08450) | 1769437..1771473 | + | 2037 | WP_009889450.1 | thioredoxin domain-containing protein | - |
| OGM26_RS08455 (OGM26_08455) | 1771664..1772230 | - | 567 | WP_009889452.1 | MarR family transcriptional regulator | - |
| OGM26_RS08460 (OGM26_08460) | 1772514..1773050 | + | 537 | WP_009889454.1 | alpha/beta fold hydrolase | - |
| OGM26_RS08465 (OGM26_08465) | 1773682..1773780 | + | 99 | Protein_1581 | transposase | - |
| OGM26_RS08470 (OGM26_08470) | 1773782..1774900 | + | 1119 | WP_233658765.1 | IS200/IS605 family element RNA-guided endonuclease TnpB | - |
| OGM26_RS08475 (OGM26_08475) | 1775019..1775426 | + | 408 | Protein_1583 | alpha/beta hydrolase | - |
| OGM26_RS08480 (OGM26_08480) | 1775891..1777105 | + | 1215 | WP_009893153.1 | helix-turn-helix transcriptional regulator | - |
| OGM26_RS08485 (OGM26_08485) | 1777525..1778046 | - | 522 | WP_009889468.1 | GNAT family N-acetyltransferase | - |
| OGM26_RS08490 (OGM26_08490) | 1778402..1779199 | + | 798 | WP_003436560.1 | 3D domain-containing protein | - |
| OGM26_RS08495 (OGM26_08495) | 1779309..1779899 | + | 591 | WP_009893156.1 | SGNH/GDSL hydrolase family protein | - |
| OGM26_RS08500 (OGM26_08500) | 1779965..1781662 | + | 1698 | WP_009893157.1 | phospho-sugar mutase | - |
| OGM26_RS08505 (OGM26_08505) | 1781876..1782715 | + | 840 | WP_003436555.1 | YihY/virulence factor BrkB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|