MGE detailed information
MGE type: Genomic_island MGE length: 8840 bp
Accession: NZ_CP107010 Location: 842265..851104 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Accession: NZ_CP107010 Location: 842265..851104 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF884_RS04040 (837738) | 837738..839255 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| OF884_RS04045 (839331) | 839331..839876 | - | 546 | WP_000133985.1 | isopentenyl-diphosphate Delta-isomerase | - |
| OF884_RS04050 (840141) | 840141..840899 | + | 759 | WP_000244330.1 | amidase activator ActS | - |
| OF884_RS04060 (841184) | 841184..841990 | - | 807 | WP_077905557.1 | DUF1460 domain-containing protein | - |
| OF884_RS04065 (842265) | 842265..842516 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| OF884_RS04070 (842693) | 842693..842920 | + | 228 | WP_000557548.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| OF884_RS04075 (842920) | 842920..843318 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OF884_RS04080 (844126) | 844126..844662 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| OF884_RS04085 (844709) | 844709..845341 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| OF884_RS04090 (846060) | 846060..846644 | + | 585 | WP_001244635.1 | putative fimbrial-like protein YbgD | VF |
| OF884_RS04095 (846764) | 846764..849253 | + | 2490 | WP_023210980.1 | Outer membrane usher protein PapC | VF |
| OF884_RS04100 (849294) | 849294..850037 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| OF884_RS04105 (850034) | 850034..851104 | + | 1071 | WP_023137616.1 | fimbrial protein | - |
| OF884_RS04110 (851211) | 851211..851717 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| OF884_RS04115 (851704) | 851704..852462 | + | 759 | WP_000134800.1 | transcriptional regulator | - |
| OF884_RS04120 (852672) | 852672..853502 | - | 831 | WP_263587393.1 | nickel/cobalt efflux protein RcnA | - |
| OF884_RS04125 (853624) | 853624..853896 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| OF884_RS04130 (853927) | 853927..855156 | - | 1230 | WP_000036837.1 | amino acid permease | - |
| OF884_RS04135 (855298) | 855298..855753 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|