MGE detailed information
MGE type: Prophage MGE length: 33957 bp
Accession: NZ_CP107010 Location: 2002959..2036915 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Accession: NZ_CP107010 Location: 2002959..2036915 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain SZ21B23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF884_RS09535 () | 1999231..1999872 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OF884_RS09540 () | 1999972..2001150 | - | 1179 | WP_000173424.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OF884_RS09545 () | 2001281..2001571 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OF884_RS09550 () | 2001639..2001992 | + | 354 | WP_001042123.1 | protein YebF | - |
| OF884_RS09555 () | 2002086..2002745 | + | 660 | WP_000024709.1 | tellurite resistance TerB family protein | - |
| OF884_RS09560 () | 2002959..2005010 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| OF884_RS09565 () | 2005047..2005745 | - | 699 | WP_000944287.1 | exodeoxyribonuclease X | - |
| OF884_RS09570 () | 2005769..2006425 | - | 657 | WP_000100249.1 | carbon-nitrogen hydrolase family protein | - |
| OF884_RS09575 () | 2006533..2006763 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OF884_RS09580 () | 2006901..2007275 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OF884_RS09585 () | 2007276..2008151 | + | 876 | WP_000979706.1 | copper homeostasis membrane protein CopD | - |
| OF884_RS09590 () | 2008168..2008521 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2008621..2008766 | - | 146 | - | - | Antitoxin Detail |
| - | 2008661..2008764 | + | 104 | - | - | Toxin Detail |
| OF884_RS09595 () | 2008894..2009736 | - | 843 | Protein_1877 | hypothetical protein ; Integrase | Integrase |
| OF884_RS09600 () | 2009827..2010183 | + | 357 | WP_000003145.1 | hypothetical protein | - |
| OF884_RS09605 () | 2010137..2010343 | + | 207 | Protein_1879 | phage tail protein | - |
| OF884_RS09610 () | 2010515..2010670 | + | 156 | Protein_1880 | DUF4376 domain-containing protein | - |
| OF884_RS09615 () | 2010776..2011108 | + | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| OF884_RS09620 () | 2011157..2011266 | + | 110 | Protein_1882 | tail fiber assembly protein | - |
| OF884_RS09625 () | 2011357..2011542 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| OF884_RS09630 () | 2011785..2011982 | - | 198 | Protein_1884 | tail fiber assembly protein | - |
| OF884_RS09635 () | 2011978..2012748 | - | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| OF884_RS09640 () | 2012824..2012916 | + | 93 | Protein_1886 | DUF4113 domain-containing protein | - |
| OF884_RS09645 () | 2013239..2013367 | + | 129 | Protein_1887 | helix-turn-helix domain-containing protein | - |
| OF884_RS09650 () | 2013396..2014196 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| OF884_RS09655 () | 2015160..2016239 | - | 1080 | WP_023210518.1 | hypothetical protein ; Integrase | Integrase |
| OF884_RS09660 () | 2016272..2017423 | - | 1152 | Protein_1890 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| OF884_RS09665 () | 2017412..2017603 | + | 192 | Protein_1891 | glycoside hydrolase family 19 protein | - |
| OF884_RS09670 () | 2017657..2018123 | + | 467 | Protein_1892 | DUF2514 domain-containing protein | - |
| OF884_RS09675 () | 2018380..2018547 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| OF884_RS09680 () | 2018612..2018800 | - | 189 | WP_001034748.1 | hypothetical protein | - |
| OF884_RS09685 () | 2018855..2019346 | + | 492 | WP_000340812.1 | DUF1441 family protein | - |
| OF884_RS09690 () | 2019333..2019900 | + | 568 | Protein_1896 | phage terminase large subunit family protein | - |
| OF884_RS09695 () | 2019899..2021130 | + | 1232 | Protein_1897 | tail fiber protein | - |
| OF884_RS09700 () | 2021128..2021496 | + | 369 | Protein_1898 | macro domain-containing protein | - |
| OF884_RS09705 () | 2021481..2021951 | + | 471 | Protein_1899 | tail fiber assembly protein | - |
| OF884_RS09710 () | 2022048..2022248 | - | 201 | WP_001751604.1 | PagK family vesicle-borne virulence factor | - |
| OF884_RS09715 () | 2022638..2022818 | - | 181 | Protein_1901 | IS3 family transposase | - |
| OF884_RS09720 () | 2022809..2022910 | + | 102 | Protein_1902 | arsenic transporter | - |
| OF884_RS09725 () | 2023519..2023751 | + | 233 | Protein_1903 | helix-turn-helix domain-containing protein | - |
| OF884_RS09730 () | 2024078..2024692 | - | 615 | WP_000848060.1 | disulfide bond formation protein B | - |
| OF884_RS09735 () | 2024702..2024860 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OF884_RS09740 () | 2024993..2025907 | - | 915 | WP_263587406.1 | DMT family transporter | - |
| OF884_RS09745 () | 2027202..2027623 | - | 422 | Protein_1907 | tyrosine-type recombinase/integrase | - |
| OF884_RS09750 () | 2027694..2028888 | + | 1195 | Protein_1908 | IS256 family transposase IS285 | Transposase |
| OF884_RS09755 () | 2029034..2029174 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| OF884_RS09760 () | 2029340..2029609 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| OF884_RS09765 () | 2029979..2030398 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| OF884_RS09770 () | 2030771..2031247 | - | 477 | WP_000030945.1 | hypothetical protein | - |
| OF884_RS09775 () | 2031575..2031970 | - | 396 | WP_000422879.1 | DUF1398 domain-containing protein | - |
| OF884_RS09780 () | 2032654..2033376 | + | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| OF884_RS09785 () | 2033661..2033825 | + | 165 | WP_001134856.1 | membrane protein | - |
| OF884_RS09790 () | 2034049..2034699 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| OF884_RS09795 () | 2034718..2034909 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| OF884_RS09800 () | 2035020..2035256 | - | 237 | WP_024131108.1 | YebV family protein | - |
| OF884_RS09805 () | 2035374..2036813 | - | 1440 | WP_024132151.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OF884_RS09810 () | 2036891..2039524 | - | 2634 | WP_024146914.1 | PqiB family protein | - |
| OF884_RS09815 () | 2039493..2040776 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| OF884_RS09820 () | 2040905..2041402 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|