NZ_CP1069962300227..2312066

MGE detailed information

MGE type: Genomic_island        MGE length: 11840 bp
Accession: NZ_CP106996        Location: 2300227..2312066         Organism: Escherichia coli strain SY22D8       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OFB06_RS11260 (2300227) 2300227..2300493 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
OFB06_RS11265 (2300493) 2300493..2301815 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
OFB06_RS11270 (2302127) 2302127..2302335 + 209 Protein_2203 AraC family transcriptional regulator -
OFB06_RS11275 (2302590) 2302590..2302943 + 354 Protein_2204 hypothetical protein VF
OFB06_RS11280 (2302944) 2302944..2303390 + 447 Protein_2205 hypothetical protein VF
OFB06_RS11285 (2303403) 2303403..2303906 + 504 WP_000825452.1 Protein FimG VF
OFB06_RS11290 (2303965) 2303965..2304879 + 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
OFB06_RS11295 (2305213) 2305213..2307492 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
OFB06_RS11300 (2307740) 2307740..2307937 + 198 WP_000543384.1 two-component system connector SafA -
OFB06_RS11305 (2308012) 2308012..2308773 + 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
OFB06_RS11310 (2309175) 2309175..2310857 + 1683 WP_001295684.1 sulfatase -
OFB06_RS11315 (2310909) 2310909..2312066 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
OFB06_RS11320 (2312032) 2312032..2312154 - 123 WP_120795387.1 protein YneP -
OFB06_RS11325 (2312357) 2312357..2314042 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
OFB06_RS11330 (2314080) 2314080..2316452 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.005
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.005
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.003
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.005
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.005
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.005
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.005