MGE detailed information
MGE type: Genomic_island MGE length: 64131 bp
Accession: NZ_CP106929 Location: 3499482..3563612 Organism: Escherichia coli strain MFDS1001074 Replicon: chromosome
Accession: NZ_CP106929 Location: 3499482..3563612 Organism: Escherichia coli strain MFDS1001074 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OEG89_RS17345 (3495889) | 3495889..3496608 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| OEG89_RS17350 (3496605) | 3496605..3498236 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| OEG89_RS17355 (3498417) | 3498417..3498647 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OEG89_RS17360 (3498659) | 3498659..3498931 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| OEG89_RS17365 (3499158) | 3499158..3499454 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| OEG89_RS17370 (3499482) | 3499482..3499655 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| OEG89_RS17375 (3499774) | 3499774..3501291 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OEG89_RS17380 (3501528) | 3501528..3502985 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| OEG89_RS17385 (3503044) | 3503044..3505191 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OEG89_RS17390 (3505271) | 3505271..3506605 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OEG89_RS17395 (3506970) | 3506970..3508508 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OEG89_RS17400 (3509318) | 3509318..3510160 | - | 843 | WP_001382663.1 | DUF4942 domain-containing protein | - |
| OEG89_RS17405 (3510245) | 3510245..3510442 | - | 198 | WP_000839233.1 | DUF957 domain-containing protein | - |
| OEG89_RS17410 (3510454) | 3510454..3510888 | - | 435 | WP_000532709.1 | DUF5983 family protein | - |
| OEG89_RS17415 (3510989) | 3510989..3511315 | - | 327 | WP_000854717.1 | TA system toxin CbtA family protein | Toxin Detail |
| OEG89_RS17420 (3511405) | 3511405..3511773 | - | 369 | WP_001285644.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OEG89_RS17425 (3511850) | 3511850..3512005 | - | 156 | Protein_3390 | IS30 family transposase IS30D | Transposase |
| OEG89_RS17430 (3512072) | 3512072..3512329 | - | 258 | Protein_3391 | IS3 family transposase ISSfl10 | Transposase |
| OEG89_RS17435 (3512394) | 3512394..3512504 | - | 111 | Protein_3392 | IS66 family transposase ISEc47 | Transposase |
| OEG89_RS17440 (3512501) | 3512501..3512935 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| OEG89_RS17445 (3513022) | 3513022..3513318 | - | 297 | Protein_3394 | IS256 family transposase ISEic2 | Transposase |
| OEG89_RS17450 (3513509) | 3513509..3515075 | - | 1567 | Protein_3395 | IS66 family transposase | - |
| OEG89_RS17455 (3515095) | 3515095..3515442 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| OEG89_RS17460 (3515442) | 3515442..3516117 | - | 676 | Protein_3397 | IS66 family transposase ISCro1 | Transposase |
| OEG89_RS17465 (3516649) | 3516649..3517811 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| OEG89_RS17470 (3518087) | 3518087..3518266 | + | 180 | WP_000152416.1 | GNAT family N-acetyltransferase | - |
| OEG89_RS17475 (3518989) | 3518989..3519276 | - | 288 | WP_263308138.1 | hypothetical protein | VF |
| OEG89_RS17480 (3519579) | 3519579..3520397 | - | 819 | WP_000829101.1 | SdiA-regulated domain-containing protein | - |
| OEG89_RS17485 (3520544) | 3520544..3521689 | - | 1146 | WP_000606967.1 | hypothetical protein | VF |
| OEG89_RS17490 (3522904) | 3522904..3523275 | + | 372 | WP_263308139.1 | type III secretion system LEE master regulator Ler | - |
| OEG89_RS17495 (3523290) | 3523290..3523508 | + | 219 | WP_000628726.1 | hypothetical protein | VF |
| OEG89_RS17500 (3523521) | 3523521..3523835 | + | 315 | WP_000084152.1 | hypothetical protein | VF |
| OEG89_RS17505 (3523832) | 3523832..3524431 | + | 600 | WP_000153999.1 | hypothetical protein | VF |
| OEG89_RS17510 (3524418) | 3524418..3525071 | + | 654 | WP_000780744.1 | hypothetical protein | VF |
| OEG89_RS17515 (3525076) | 3525076..3525729 | + | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| OEG89_RS17520 (3525729) | 3525729..3525998 | + | 270 | WP_000447503.1 | hypothetical protein | VF |
| OEG89_RS17525 (3525998) | 3525998..3526774 | + | 777 | WP_263308140.1 | hypothetical protein | VF |
| OEG89_RS17530 (3526767) | 3526767..3527804 | + | 1038 | WP_001291686.1 | Yop proteins translocation protein U | VF |
| OEG89_RS17535 (3527801) | 3527801..3528259 | - | 459 | WP_001342442.1 | hypothetical protein | VF |
| OEG89_RS17540 (3528456) | 3528456..3528812 | + | 357 | WP_000605356.1 | nucleoside transporter | - |
| OEG89_RS17545 (3528887) | 3528887..3529300 | + | 414 | WP_000444181.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| OEG89_RS17550 (3529686) | 3529686..3530141 | - | 456 | WP_000087468.1 | hypothetical protein | VF |
| OEG89_RS17555 (3530155) | 3530155..3531693 | - | 1539 | WP_096962518.1 | Type 3 secretion system secretin | VF |
| OEG89_RS17560 (3531693) | 3531693..3532148 | - | 456 | WP_001063688.1 | hypothetical protein | VF |
| OEG89_RS17565 (3532154) | 3532154..3532726 | - | 573 | WP_001233824.1 | Yop proteins translocation lipoprotein J | VF |
| OEG89_RS17570 (3532728) | 3532728..3533105 | - | 378 | WP_001059795.1 | hypothetical protein | VF |
| OEG89_RS17575 (3533189) | 3533189..3533491 | - | 303 | WP_000338345.1 | hypothetical protein | VF |
| OEG89_RS17580 (3533675) | 3533675..3534028 | + | 354 | WP_001050414.1 | hypothetical protein | VF |
| OEG89_RS17585 (3534025) | 3534025..3536052 | + | 2028 | WP_001037820.1 | Secretion system apparatus protein SsaV | VF |
| OEG89_RS17590 (3536036) | 3536036..3537376 | + | 1341 | WP_000599711.1 | putative ATP synthase YscN | VF |
| OEG89_RS17595 (3537436) | 3537436..3537756 | + | 321 | WP_001062953.1 | hypothetical protein | VF |
| OEG89_RS17600 (3537749) | 3537749..3538165 | + | 417 | WP_001443671.1 | hypothetical protein | VF |
| OEG89_RS17605 (3538128) | 3538128..3539045 | + | 918 | WP_001050796.1 | hypothetical protein | VF |
| OEG89_RS17610 (3539076) | 3539076..3539591 | + | 516 | WP_001360071.1 | hypothetical protein | VF |
| OEG89_RS17615 (3539809) | 3539809..3540168 | - | 360 | WP_096962517.1 | hypothetical protein | VF |
| OEG89_RS17620 (3540419) | 3540419..3541030 | + | 612 | WP_000492642.1 | hypothetical protein | VF |
| OEG89_RS17625 (3541477) | 3541477..3543093 | + | 1617 | WP_001121330.1 | Translocated intimin receptor Tir | VF |
| OEG89_RS17630 (3543227) | 3543227..3543697 | + | 471 | WP_000098786.1 | Tir chaperone | VF |
| OEG89_RS17635 (3543758) | 3543758..3546577 | + | 2820 | WP_000627895.1 | Intimin | VF |
| OEG89_RS17640 (3546792) | 3546792..3548012 | - | 1221 | WP_263308141.1 | hypothetical protein | VF |
| OEG89_RS17645 (3548155) | 3548155..3549210 | + | 1056 | WP_001273458.1 | hypothetical protein | VF |
| OEG89_RS17650 (3549268) | 3549268..3549846 | + | 579 | WP_000381555.1 | hypothetical protein | VF |
| OEG89_RS17655 (3549859) | 3549859..3551001 | + | 1143 | WP_000935768.1 | hypothetical protein | VF |
| OEG89_RS17660 (3551022) | 3551022..3551966 | + | 945 | WP_096962516.1 | Protein EaeB | VF |
| OEG89_RS17665 (3551973) | 3551973..3552380 | + | 408 | WP_000228587.1 | hypothetical protein | VF |
| OEG89_RS17670 (3552417) | 3552417..3552638 | + | 222 | WP_001053840.1 | hypothetical protein | VF |
| OEG89_RS17675 (3552644) | 3552644..3552922 | + | 279 | WP_000245866.1 | hypothetical protein | VF |
| OEG89_RS17680 (3553138) | 3553138..3553752 | + | 615 | Protein_3441 | Secreted effector protein EspF(U) | VF |
| OEG89_RS17685 (3554076) | 3554076..3554660 | - | 585 | WP_263308142.1 | hypothetical protein | VF |
| OEG89_RS17690 (3554858) | 3554858..3555496 | + | 639 | WP_001145629.1 | hypothetical protein | VF |
| OEG89_RS17695 (3556080) | 3556080..3556214 | - | 135 | Protein_3444 | hypothetical protein | - |
| OEG89_RS17700 (3556231) | 3556231..3556719 | - | 489 | WP_000761653.1 | DUF5983 family protein | - |
| OEG89_RS17705 (3556716) | 3556716..3557092 | - | 377 | Protein_3446 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | - |
| OEG89_RS17710 (3557181) | 3557181..3557549 | - | 369 | WP_001285585.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| OEG89_RS17715 (3557623) | 3557623..3557844 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| OEG89_RS17720 (3558280) | 3558280..3559152 | - | 873 | WP_001069781.1 | GTPase family protein | - |
| OEG89_RS17725 (3559918) | 3559918..3560298 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| OEG89_RS17730 (3560295) | 3560295..3560642 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| OEG89_RS17735 (3560692) | 3560692..3562230 | + | 1539 | WP_000998055.1 | IS66 family transposase ISEc8 | Transposase |
| OEG89_RS17740 (3562347) | 3562347..3563612 | - | 1266 | WP_001218841.1 | Prophage integrase IntS ; Integrase | Integrase |
| OEG89_RS17750 (3563992) | 3563992..3564567 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| OEG89_RS17755 (3564604) | 3564604..3566301 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| OEG89_RS17760 (3566277) | 3566277..3566615 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| OEG89_RS17765 (3566731) | 3566731..3568032 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|