MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33271 bp
Accession: NZ_CP106815 Location: 1624819..1658089 Organism: Neisseria gonorrhoeae strain 10562 Replicon: chromosome
Accession: NZ_CP106815 Location: 1624819..1658089 Organism: Neisseria gonorrhoeae strain 10562 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCL41_RS08410 (OCL41_08410) | 1620275..1621693 | - | 1419 | WP_003697465.1 | type I glutamate--ammonia ligase | - |
| OCL41_RS08415 (OCL41_08415) | 1622004..1622813 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| OCL41_RS08420 (OCL41_08420) | 1622816..1623517 | + | 702 | WP_003693494.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OCL41_RS08430 (OCL41_08430) | 1624057..1624791 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| OCL41_RS08435 (OCL41_08435) | 1624862..1625392 | - | 531 | WP_003700370.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| OCL41_RS08440 (OCL41_08440) | 1625373..1625954 | - | 582 | WP_003695504.1 | LPS export ABC transporter periplasmic protein LptC | - |
| OCL41_RS08445 (OCL41_08445) | 1625951..1626487 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| OCL41_RS08450 (OCL41_08450) | 1626553..1627527 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| OCL41_RS08455 (OCL41_08455) | 1627624..1628679 | + | 1056 | WP_003689551.1 | transaldolase | - |
| OCL41_RS08460 (OCL41_08460) | 1628691..1628825 | + | 135 | WP_003703570.1 | hypothetical protein | - |
| OCL41_RS08465 (OCL41_08465) | 1628830..1629120 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| OCL41_RS08470 (OCL41_08470) | 1629137..1630024 | + | 888 | WP_003693489.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| OCL41_RS08475 (OCL41_08475) | 1630094..1631110 | - | 1017 | WP_003693487.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| OCL41_RS08480 (OCL41_08480) | 1631230..1632384 | + | 1155 | WP_003693486.1 | hypothetical protein ; Integrase | Integrase |
| OCL41_RS08485 (OCL41_08485) | 1632434..1632700 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| OCL41_RS08490 (OCL41_08490) | 1632808..1633956 | - | 1149 | WP_134994054.1 | SAM-dependent methyltransferase | - |
| OCL41_RS08495 (OCL41_08495) | 1633953..1634936 | - | 984 | WP_134994057.1 | hypothetical protein | - |
| OCL41_RS08500 (OCL41_08500) | 1635047..1635262 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| OCL41_RS08505 (OCL41_08505) | 1635314..1635805 | - | 492 | WP_033911206.1 | siphovirus Gp157 family protein | - |
| OCL41_RS08510 (OCL41_08510) | 1635802..1635984 | - | 183 | WP_003691535.1 | hypothetical protein | - |
| OCL41_RS08515 (OCL41_08515) | 1636124..1636810 | - | 687 | WP_010357532.1 | hypothetical protein | - |
| OCL41_RS08520 (OCL41_08520) | 1636879..1637040 | - | 162 | WP_003691530.1 | hypothetical protein | - |
| OCL41_RS08525 (OCL41_08525) | 1637037..1637312 | - | 276 | WP_033911205.1 | hypothetical protein | - |
| OCL41_RS08530 (OCL41_08530) | 1637465..1637797 | - | 333 | WP_003695500.1 | hypothetical protein | - |
| OCL41_RS08535 (OCL41_08535) | 1638343..1639104 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| OCL41_RS08540 (OCL41_08540) | 1639193..1639609 | - | 417 | WP_003700378.1 | hypothetical protein | - |
| OCL41_RS08545 (OCL41_08545) | 1639618..1640253 | - | 636 | WP_225602681.1 | Panacea domain-containing protein | - |
| OCL41_RS08550 (OCL41_08550) | 1640384..1640785 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OCL41_RS08555 (OCL41_08555) | 1640887..1641069 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OCL41_RS08560 (OCL41_08560) | 1641239..1642057 | - | 819 | WP_003693474.1 | DUF3037 domain-containing protein | - |
| OCL41_RS08565 (OCL41_08565) | 1642332..1643087 | - | 756 | WP_003693472.1 | LexA family transcriptional regulator | - |
| OCL41_RS08570 (OCL41_08570) | 1643224..1643409 | + | 186 | WP_002238713.1 | Cro/CI family transcriptional regulator | - |
| OCL41_RS08575 (OCL41_08575) | 1643498..1643653 | + | 156 | WP_003698902.1 | hypothetical protein | - |
| OCL41_RS08580 (OCL41_08580) | 1643630..1643818 | - | 189 | WP_003691445.1 | hypothetical protein | - |
| OCL41_RS08585 (OCL41_08585) | 1643991..1644218 | + | 228 | WP_003705596.1 | helix-turn-helix domain-containing protein | - |
| OCL41_RS08590 (OCL41_08590) | 1644215..1644682 | + | 468 | WP_229433445.1 | helix-turn-helix domain-containing protein | - |
| OCL41_RS08595 (OCL41_08595) | 1644696..1645226 | + | 531 | WP_229931507.1 | hypothetical protein | - |
| OCL41_RS08600 (OCL41_08600) | 1645241..1646020 | + | 780 | WP_025455898.1 | IS21 family transposase IS5376 | Transposase |
| OCL41_RS08605 (OCL41_08605) | 1646013..1646243 | + | 231 | WP_012503908.1 | hypothetical protein | - |
| OCL41_RS08610 (OCL41_08610) | 1646334..1646759 | + | 426 | WP_263057151.1 | DUF3310 domain-containing protein | - |
| OCL41_RS08615 (OCL41_08615) | 1647009..1647158 | + | 150 | WP_033911194.1 | phage associated protein | - |
| OCL41_RS08620 (OCL41_08620) | 1647186..1647566 | + | 381 | WP_263057152.1 | hypothetical protein | - |
| OCL41_RS08625 (OCL41_08625) | 1647463..1647843 | + | 381 | WP_033911195.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OCL41_RS08630 (OCL41_08630) | 1648172..1649133 | - | 962 | Protein_1682 | IS110 family transposase | - |
| OCL41_RS08635 (OCL41_08635) | 1650117..1651204 | - | 1088 | Protein_1683 | zonular occludens toxin domain-containing protein | - |
| OCL41_RS08640 (OCL41_08640) | 1651201..1651453 | - | 253 | Protein_1684 | DUF2523 domain-containing protein | - |
| OCL41_RS08645 (OCL41_08645) | 1651501..1653049 | - | 1549 | Protein_1685 | IgG-binding virulence factor TspB family protein | - |
| OCL41_RS08650 (OCL41_08650) | 1652991..1653308 | - | 318 | Protein_1686 | DUF1132 family protein | - |
| OCL41_RS08655 (OCL41_08655) | 1653436..1653709 | - | 274 | Protein_1687 | hypothetical protein | - |
| OCL41_RS08660 (OCL41_08660) | 1653716..1653934 | - | 219 | WP_003691584.1 | major capsid protein | - |
| OCL41_RS08665 (OCL41_08665) | 1654020..1654223 | - | 204 | WP_003694138.1 | hypothetical protein | - |
| OCL41_RS08670 (OCL41_08670) | 1654237..1654548 | - | 312 | WP_003694141.1 | hypothetical protein | - |
| OCL41_RS08675 (OCL41_08675) | 1654562..1655848 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| OCL41_RS08680 (OCL41_08680) | 1655877..1656101 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| OCL41_RS08685 (OCL41_08685) | 1656497..1656703 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| OCL41_RS08690 (OCL41_08690) | 1656798..1657967 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| OCL41_RS08695 (OCL41_08695) | 1658113..1658883 | - | 771 | WP_003700464.1 | hypothetical protein | - |
| OCL41_RS08700 (OCL41_08700) | 1658985..1659236 | + | 252 | WP_003697566.1 | hypothetical protein | - |
| OCL41_RS08705 (OCL41_08705) | 1659288..1660094 | + | 807 | WP_003689749.1 | basic amino acid ABC transporter substrate-binding protein | - |
| OCL41_RS08710 (OCL41_08710) | 1660401..1661924 | + | 1524 | WP_017147217.1 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|