MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33261 bp
Accession: NZ_CP106805 Location: 1626710..1659970 Organism: Neisseria gonorrhoeae strain 10743 Replicon: chromosome
Accession: NZ_CP106805 Location: 1626710..1659970 Organism: Neisseria gonorrhoeae strain 10743 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCL39_RS08395 (OCL39_08395) | 1622166..1623584 | - | 1419 | WP_003689535.1 | type I glutamate--ammonia ligase | - |
| OCL39_RS08400 (OCL39_08400) | 1623895..1624704 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| OCL39_RS08405 (OCL39_08405) | 1624707..1625408 | + | 702 | WP_003693494.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OCL39_RS08415 (OCL39_08415) | 1625948..1626682 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| OCL39_RS08420 (OCL39_08420) | 1626753..1627283 | - | 531 | WP_003697466.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| OCL39_RS08425 (OCL39_08425) | 1627264..1627845 | - | 582 | WP_003689544.1 | LPS export ABC transporter periplasmic protein LptC | - |
| OCL39_RS08430 (OCL39_08430) | 1627842..1628378 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| OCL39_RS08435 (OCL39_08435) | 1628444..1629418 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| OCL39_RS08440 (OCL39_08440) | 1629515..1630570 | + | 1056 | WP_003689551.1 | transaldolase | - |
| OCL39_RS08445 (OCL39_08445) | 1630582..1630716 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| OCL39_RS08450 (OCL39_08450) | 1630721..1631011 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| OCL39_RS08455 (OCL39_08455) | 1631028..1631915 | + | 888 | WP_003693489.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| OCL39_RS08460 (OCL39_08460) | 1631985..1633001 | - | 1017 | WP_106336819.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| OCL39_RS08465 (OCL39_08465) | 1633121..1634275 | + | 1155 | WP_003693486.1 | hypothetical protein ; Integrase | Integrase |
| OCL39_RS08470 (OCL39_08470) | 1634325..1634591 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| OCL39_RS08475 (OCL39_08475) | 1634699..1635646 | - | 948 | WP_003703099.1 | hypothetical protein | - |
| OCL39_RS08480 (OCL39_08480) | 1635618..1635848 | - | 231 | WP_003695893.1 | hypothetical protein | - |
| OCL39_RS08485 (OCL39_08485) | 1635845..1636828 | - | 984 | WP_260236990.1 | hypothetical protein | - |
| OCL39_RS08490 (OCL39_08490) | 1636939..1637154 | - | 216 | WP_003693860.1 | hypothetical protein | - |
| OCL39_RS08495 (OCL39_08495) | 1637206..1637697 | - | 492 | WP_050159882.1 | siphovirus Gp157 family protein | - |
| OCL39_RS08500 (OCL39_08500) | 1637694..1637876 | - | 183 | WP_260236894.1 | hypothetical protein | - |
| OCL39_RS08505 (OCL39_08505) | 1638016..1638702 | - | 687 | WP_263055815.1 | hypothetical protein | - |
| OCL39_RS08510 (OCL39_08510) | 1638771..1638932 | - | 162 | WP_047924242.1 | hypothetical protein | - |
| OCL39_RS08515 (OCL39_08515) | 1638929..1639204 | - | 276 | WP_003695501.1 | hypothetical protein | - |
| OCL39_RS08520 (OCL39_08520) | 1639357..1639731 | - | 375 | WP_263055814.1 | hypothetical protein | - |
| OCL39_RS08525 (OCL39_08525) | 1639828..1640022 | - | 195 | WP_003703103.1 | hypothetical protein | - |
| OCL39_RS08530 (OCL39_08530) | 1640234..1640995 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| OCL39_RS08535 (OCL39_08535) | 1641509..1642093 | - | 585 | WP_003693477.1 | Panacea domain-containing protein | - |
| OCL39_RS08540 (OCL39_08540) | 1642276..1642677 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OCL39_RS08545 (OCL39_08545) | 1642779..1642961 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OCL39_RS08550 (OCL39_08550) | 1643131..1643961 | - | 831 | WP_229505546.1 | DUF3037 domain-containing protein | - |
| OCL39_RS08555 (OCL39_08555) | 1644224..1644979 | - | 756 | WP_003693472.1 | LexA family transcriptional regulator | - |
| OCL39_RS08560 (OCL39_08560) | 1645116..1645301 | + | 186 | WP_002238713.1 | Cro/CI family transcriptional regulator | - |
| OCL39_RS08565 (OCL39_08565) | 1645390..1645545 | + | 156 | WP_003703527.1 | hypothetical protein | - |
| OCL39_RS08570 (OCL39_08570) | 1645522..1645710 | - | 189 | WP_003696008.1 | hypothetical protein | - |
| OCL39_RS08575 (OCL39_08575) | 1645883..1646110 | + | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| OCL39_RS08580 (OCL39_08580) | 1646107..1646592 | + | 486 | WP_260236988.1 | helix-turn-helix domain-containing protein | - |
| OCL39_RS08585 (OCL39_08585) | 1646589..1647095 | + | 507 | WP_260236987.1 | hypothetical protein | - |
| OCL39_RS08590 (OCL39_08590) | 1647109..1647888 | + | 780 | WP_263055826.1 | IS21 family transposase IS5376 | Transposase |
| OCL39_RS08595 (OCL39_08595) | 1647881..1648126 | + | 246 | WP_260236986.1 | hypothetical protein | - |
| OCL39_RS08600 (OCL39_08600) | 1648201..1648695 | + | 495 | WP_263055813.1 | DUF3310 domain-containing protein | - |
| OCL39_RS08605 (OCL39_08605) | 1648872..1649021 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| OCL39_RS08610 (OCL39_08610) | 1649050..1649331 | + | 282 | WP_003689109.1 | hypothetical protein | - |
| OCL39_RS08615 (OCL39_08615) | 1649322..1649702 | + | 381 | WP_017147112.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OCL39_RS08620 (OCL39_08620) | 1649719..1649847 | - | 129 | WP_257615605.1 | hypothetical protein | - |
| OCL39_RS08625 (OCL39_08625) | 1650031..1650993 | - | 963 | WP_260237002.1 | IS110 family transposase ISNgo2 | Transposase |
| OCL39_RS08630 (OCL39_08630) | 1651503..1651862 | - | 360 | WP_003689732.1 | hypothetical protein | - |
| OCL39_RS08635 (OCL39_08635) | 1651983..1653055 | - | 1073 | Protein_1684 | zonular occludens toxin domain-containing protein | - |
| OCL39_RS08640 (OCL39_08640) | 1653065..1653355 | - | 291 | WP_003689734.1 | DUF2523 domain-containing protein | - |
| OCL39_RS08645 (OCL39_08645) | 1653356..1654924 | - | 1569 | WP_263055827.1 | IgG-binding virulence factor TspB family protein | - |
| OCL39_RS08650 (OCL39_08650) | 1654866..1655183 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| OCL39_RS08655 (OCL39_08655) | 1655311..1655589 | - | 279 | WP_003689168.1 | hypothetical protein | - |
| OCL39_RS08660 (OCL39_08660) | 1655596..1655815 | - | 220 | Protein_1689 | major capsid protein | - |
| OCL39_RS08665 (OCL39_08665) | 1655901..1656104 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| OCL39_RS08670 (OCL39_08670) | 1656118..1656429 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| OCL39_RS08675 (OCL39_08675) | 1656443..1657729 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| OCL39_RS08680 (OCL39_08680) | 1657758..1657982 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| OCL39_RS08685 (OCL39_08685) | 1658378..1658584 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| OCL39_RS08690 (OCL39_08690) | 1658679..1659848 | - | 1170 | WP_003694146.1 | O-succinylhomoserine sulfhydrylase | - |
| OCL39_RS08695 (OCL39_08695) | 1659994..1660764 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| OCL39_RS08700 (OCL39_08700) | 1660866..1661117 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| OCL39_RS08705 (OCL39_08705) | 1661169..1661975 | + | 807 | WP_003694149.1 | basic amino acid ABC transporter substrate-binding protein | - |
| OCL39_RS08710 (OCL39_08710) | 1662282..1663805 | + | 1524 | Protein_1699 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|