MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33261 bp
Accession: NZ_CP106803 Location: 1628312..1661572 Organism: Neisseria gonorrhoeae strain 10819 Replicon: chromosome
Accession: NZ_CP106803 Location: 1628312..1661572 Organism: Neisseria gonorrhoeae strain 10819 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCL40_RS08400 (OCL40_08400) | 1623768..1625186 | - | 1419 | WP_003689535.1 | type I glutamate--ammonia ligase | - |
| OCL40_RS08405 (OCL40_08405) | 1625497..1626306 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| OCL40_RS08410 (OCL40_08410) | 1626309..1627010 | + | 702 | WP_003693494.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| OCL40_RS08420 (OCL40_08420) | 1627550..1628284 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| OCL40_RS08425 (OCL40_08425) | 1628355..1628885 | - | 531 | WP_003697466.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| OCL40_RS08430 (OCL40_08430) | 1628866..1629447 | - | 582 | WP_003689544.1 | LPS export ABC transporter periplasmic protein LptC | - |
| OCL40_RS08435 (OCL40_08435) | 1629444..1629980 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| OCL40_RS08440 (OCL40_08440) | 1630046..1631020 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| OCL40_RS08445 (OCL40_08445) | 1631117..1632172 | + | 1056 | WP_003689551.1 | transaldolase | - |
| OCL40_RS08450 (OCL40_08450) | 1632184..1632318 | + | 135 | WP_012503902.1 | hypothetical protein | - |
| OCL40_RS08455 (OCL40_08455) | 1632323..1632613 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| OCL40_RS08460 (OCL40_08460) | 1632630..1633517 | + | 888 | WP_003693489.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| OCL40_RS08465 (OCL40_08465) | 1633587..1634603 | - | 1017 | WP_106336819.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| OCL40_RS08470 (OCL40_08470) | 1634723..1635877 | + | 1155 | WP_003693486.1 | hypothetical protein ; Integrase | Integrase |
| OCL40_RS08475 (OCL40_08475) | 1635927..1636193 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| OCL40_RS08480 (OCL40_08480) | 1636301..1637248 | - | 948 | WP_003703099.1 | hypothetical protein | - |
| OCL40_RS08485 (OCL40_08485) | 1637220..1637450 | - | 231 | WP_003695893.1 | hypothetical protein | - |
| OCL40_RS08490 (OCL40_08490) | 1637447..1638430 | - | 984 | WP_260236990.1 | hypothetical protein | - |
| OCL40_RS08495 (OCL40_08495) | 1638541..1638756 | - | 216 | WP_003693860.1 | hypothetical protein | - |
| OCL40_RS08500 (OCL40_08500) | 1638808..1639299 | - | 492 | WP_050159882.1 | siphovirus Gp157 family protein | - |
| OCL40_RS08505 (OCL40_08505) | 1639296..1639478 | - | 183 | WP_260236894.1 | hypothetical protein | - |
| OCL40_RS08510 (OCL40_08510) | 1639618..1640304 | - | 687 | WP_263055815.1 | hypothetical protein | - |
| OCL40_RS08515 (OCL40_08515) | 1640373..1640534 | - | 162 | WP_047924242.1 | hypothetical protein | - |
| OCL40_RS08520 (OCL40_08520) | 1640531..1640806 | - | 276 | WP_003695501.1 | hypothetical protein | - |
| OCL40_RS08525 (OCL40_08525) | 1640959..1641333 | - | 375 | WP_263055814.1 | hypothetical protein | - |
| OCL40_RS08530 (OCL40_08530) | 1641430..1641624 | - | 195 | WP_003703103.1 | hypothetical protein | - |
| OCL40_RS08535 (OCL40_08535) | 1641836..1642597 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| OCL40_RS08540 (OCL40_08540) | 1643111..1643695 | - | 585 | WP_003693477.1 | Panacea domain-containing protein | - |
| OCL40_RS08545 (OCL40_08545) | 1643878..1644279 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OCL40_RS08550 (OCL40_08550) | 1644381..1644563 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OCL40_RS08555 (OCL40_08555) | 1644733..1645563 | - | 831 | WP_229505546.1 | DUF3037 domain-containing protein | - |
| OCL40_RS08560 (OCL40_08560) | 1645826..1646581 | - | 756 | WP_003693472.1 | LexA family transcriptional regulator | - |
| OCL40_RS08565 (OCL40_08565) | 1646718..1646903 | + | 186 | WP_002238713.1 | Cro/CI family transcriptional regulator | - |
| OCL40_RS08570 (OCL40_08570) | 1646992..1647147 | + | 156 | WP_003703527.1 | hypothetical protein | - |
| OCL40_RS08575 (OCL40_08575) | 1647124..1647312 | - | 189 | WP_003696008.1 | hypothetical protein | - |
| OCL40_RS08580 (OCL40_08580) | 1647485..1647712 | + | 228 | WP_003691442.1 | helix-turn-helix domain-containing protein | - |
| OCL40_RS08585 (OCL40_08585) | 1647709..1648194 | + | 486 | WP_260236988.1 | helix-turn-helix domain-containing protein | - |
| OCL40_RS08590 (OCL40_08590) | 1648191..1648697 | + | 507 | WP_260236987.1 | hypothetical protein | - |
| OCL40_RS08595 (OCL40_08595) | 1648711..1649490 | + | 780 | WP_263055826.1 | IS21 family transposase IS5376 | Transposase |
| OCL40_RS08600 (OCL40_08600) | 1649483..1649728 | + | 246 | WP_260236986.1 | hypothetical protein | - |
| OCL40_RS08605 (OCL40_08605) | 1649803..1650297 | + | 495 | WP_263055813.1 | DUF3310 domain-containing protein | - |
| OCL40_RS08610 (OCL40_08610) | 1650474..1650623 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| OCL40_RS08615 (OCL40_08615) | 1650652..1650933 | + | 282 | WP_003689109.1 | hypothetical protein | - |
| OCL40_RS08620 (OCL40_08620) | 1650924..1651304 | + | 381 | WP_017147112.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OCL40_RS08625 (OCL40_08625) | 1651321..1651449 | - | 129 | WP_257615605.1 | hypothetical protein | - |
| OCL40_RS08630 (OCL40_08630) | 1651633..1652595 | - | 963 | WP_260237002.1 | IS110 family transposase ISNgo2 | Transposase |
| OCL40_RS08635 (OCL40_08635) | 1653105..1653464 | - | 360 | WP_003689732.1 | hypothetical protein | - |
| OCL40_RS08640 (OCL40_08640) | 1653585..1654657 | - | 1073 | Protein_1685 | zonular occludens toxin domain-containing protein | - |
| OCL40_RS08645 (OCL40_08645) | 1654667..1654957 | - | 291 | WP_003689734.1 | DUF2523 domain-containing protein | - |
| OCL40_RS08650 (OCL40_08650) | 1654958..1656526 | - | 1569 | WP_263055827.1 | IgG-binding virulence factor TspB family protein | - |
| OCL40_RS08655 (OCL40_08655) | 1656468..1656785 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| OCL40_RS08660 (OCL40_08660) | 1656913..1657191 | - | 279 | WP_003689168.1 | hypothetical protein | - |
| OCL40_RS08665 (OCL40_08665) | 1657198..1657417 | - | 220 | Protein_1690 | major capsid protein | - |
| OCL40_RS08670 (OCL40_08670) | 1657503..1657706 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| OCL40_RS08675 (OCL40_08675) | 1657720..1658031 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| OCL40_RS08680 (OCL40_08680) | 1658045..1659331 | - | 1287 | WP_003697560.1 | replication initiation factor domain-containing protein | - |
| OCL40_RS08685 (OCL40_08685) | 1659360..1659584 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| OCL40_RS08690 (OCL40_08690) | 1659980..1660186 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| OCL40_RS08695 (OCL40_08695) | 1660281..1661450 | - | 1170 | WP_003694146.1 | O-succinylhomoserine sulfhydrylase | - |
| OCL40_RS08700 (OCL40_08700) | 1661596..1662366 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| OCL40_RS08705 (OCL40_08705) | 1662468..1662719 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| OCL40_RS08710 (OCL40_08710) | 1662771..1663577 | + | 807 | WP_003694149.1 | basic amino acid ABC transporter substrate-binding protein | - |
| OCL40_RS08715 (OCL40_08715) | 1663884..1665407 | + | 1524 | Protein_1700 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|