MGE detailed information
MGE type: Genomic_island MGE length: 14217 bp
Accession: NZ_CP106756 Location: 2465749..2479965 Organism: Escherichia coli strain B-JRPT-4119 Replicon: chromosome
Accession: NZ_CP106756 Location: 2465749..2479965 Organism: Escherichia coli strain B-JRPT-4119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N8153_RS11955 (2462564) | 2462564..2464249 | - | 1686 | WP_000628582.1 | ABC transporter ATP-binding protein/permease | - |
| N8153_RS11960 (2464452) | 2464452..2464574 | + | 123 | WP_120795387.1 | protein YneP | - |
| N8153_RS11965 (2464540) | 2464540..2465697 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| N8153_RS11970 (2465749) | 2465749..2467431 | - | 1683 | WP_001318307.1 | sulfatase | - |
| N8153_RS11975 (2467833) | 2467833..2468594 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| N8153_RS11980 (2468669) | 2468669..2468866 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| N8153_RS11985 (2469114) | 2469114..2471393 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| N8153_RS11990 (2471727) | 2471727..2472641 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| N8153_RS11995 (2472700) | 2472700..2473203 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| N8153_RS12000 (2473216) | 2473216..2473746 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| N8153_RS12005 (2473760) | 2473760..2476410 | - | 2651 | Protein_2329 | fimbrial biogenesis outer membrane usher protein | - |
| N8153_RS12010 (2476452) | 2476452..2477162 | - | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| N8153_RS12015 (2477523) | 2477523..2478005 | - | 483 | WP_000931227.1 | hypothetical protein | VF |
| N8153_RS12020 (2478377) | 2478377..2479699 | - | 1323 | WP_001125442.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| N8153_RS12025 (2479699) | 2479699..2479965 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |