MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111119 bp
Accession: NZ_CP106745 Location: 2462051..2573169 Organism: Pseudomonas aeruginosa strain PALA17 Replicon: chromosome
Accession: NZ_CP106745 Location: 2462051..2573169 Organism: Pseudomonas aeruginosa strain PALA17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA17_RS11865 (PALA17_02354) | 2457367..2458515 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA17_RS11870 (PALA17_02355) | 2458857..2459501 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA17_RS11875 (PALA17_02356) | 2459502..2461328 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA17_RS11880 (PALA17_02357) | 2461362..2461922 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA17_RS11890 (PALA17_02359) | 2462293..2464236 | + | 1944 | WP_012614046.1 | hypothetical protein ; Integrase | Integrase |
| PALA17_RS11895 (PALA17_02360) | 2464303..2464944 | - | 642 | WP_012614047.1 | LysR substrate-binding domain-containing protein | - |
| PALA17_RS11900 | 2465049..2465342 | + | 294 | WP_024082527.1 | helix-turn-helix transcriptional regulator | - |
| PALA17_RS11905 (PALA17_02361) | 2465369..2466262 | - | 894 | WP_012614048.1 | Hca operon transcriptional activator HcaR | VF |
| PALA17_RS11910 (PALA17_02362) | 2466583..2467152 | - | 570 | Protein_2349 | VOC family protein | - |
| PALA17_RS11915 (PALA17_02363) | 2467178..2467396 | + | 219 | WP_017511446.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| PALA17_RS11920 (PALA17_02364) | 2467497..2467691 | + | 195 | WP_012614049.1 | heavy-metal-associated domain-containing protein | - |
| PALA17_RS11925 | 2467766..2468134 | - | 369 | WP_223656233.1 | hypothetical protein | - |
| PALA17_RS11930 (PALA17_02366) | 2468230..2468502 | - | 273 | WP_012614050.1 | glutaredoxin | - |
| PALA17_RS11935 (PALA17_02367) | 2468726..2469064 | - | 339 | WP_012614051.1 | ISC system 2Fe-2S type ferredoxin | - |
| PALA17_RS11940 (PALA17_02368) | 2469080..2469559 | - | 480 | WP_012614052.1 | Cu(I)-responsive transcriptional regulator | - |
| PALA17_RS11945 (PALA17_02369) | 2469575..2472070 | - | 2496 | WP_024082529.1 | heavy metal translocating P-type ATPase | - |
| PALA17_RS11950 (PALA17_02370) | 2472306..2472662 | + | 357 | WP_015912826.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA17_RS11955 (PALA17_02371) | 2472772..2474199 | - | 1428 | WP_015912827.1 | dihydrolipoyl dehydrogenase | - |
| PALA17_RS11960 (PALA17_02372) | 2474305..2474703 | - | 399 | WP_015912828.1 | hypothetical protein | - |
| PALA17_RS11965 (PALA17_02373) | 2474757..2477903 | - | 3147 | WP_012614056.1 | efflux RND transporter permease subunit | - |
| PALA17_RS11970 (PALA17_02374) | 2477917..2479032 | - | 1116 | WP_003821159.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PALA17_RS11975 | 2479029..2479580 | - | 552 | WP_015912829.1 | hypothetical protein | - |
| PALA17_RS11980 (PALA17_02375) | 2479615..2480826 | - | 1212 | WP_223656232.1 | TolC family protein | - |
| PALA17_RS11985 (PALA17_02376) | 2481226..2481483 | + | 258 | WP_003821156.1 | metal-sensing transcriptional repressor | - |
| PALA17_RS11990 (PALA17_02377) | 2481493..2482803 | + | 1311 | WP_003821155.1 | MFS transporter | - |
| PALA17_RS11995 (PALA17_02378) | 2482937..2483959 | + | 1023 | WP_003821153.1 | cation diffusion facilitator family transporter | - |
| PALA17_RS12000 (PALA17_02379) | 2484003..2484380 | + | 378 | WP_003821152.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA17_RS12005 | 2484610..2485179 | + | 570 | WP_003821150.1 | DUF4148 domain-containing protein | - |
| PALA17_RS12010 (PALA17_02381) | 2485346..2488060 | + | 2715 | WP_012614060.1 | heavy metal translocating P-type ATPase | - |
| PALA17_RS12015 (PALA17_02382) | 2488172..2488774 | + | 603 | WP_012614061.1 | Multidrug resistance protein MdtE | VF |
| PALA17_RS12020 (PALA17_02383) | 2488765..2489496 | + | 732 | WP_269764123.1 | Multidrug resistance protein MdtA | VF |
| PALA17_RS12025 | 2489493..2492669 | + | 3177 | Protein_2372 | Efflux pump membrane transporter BepE | VF |
| PALA17_RS12030 (PALA17_02386) | 2492690..2494195 | + | 1506 | WP_003821143.1 | Outer membrane protein OprM | VF |
| PALA17_RS12035 (PALA17_02387) | 2494245..2494631 | + | 387 | WP_015912830.1 | MerR family transcriptional regulator | - |
| PALA17_RS12040 (PALA17_02388) | 2494711..2495892 | + | 1182 | WP_012614063.1 | MFS transporter | - |
| PALA17_RS12045 | 2496056..2496628 | - | 573 | WP_017638772.1 | TetR/AcrR family transcriptional regulator | - |
| PALA17_RS12050 (PALA17_02389) | 2496664..2498205 | + | 1542 | WP_223656231.1 | mercury(II) reductase | - |
| PALA17_RS12055 (PALA17_02390) | 2498583..2499428 | + | 846 | WP_024082530.1 | MFS transporter | - |
| PALA17_RS12060 (PALA17_02391) | 2499475..2499978 | - | 504 | WP_003821138.1 | ClbS/DfsB family four-helix bundle protein | - |
| PALA17_RS12065 (PALA17_02392) | 2500160..2500702 | - | 543 | WP_015912832.1 | ester cyclase | - |
| PALA17_RS12070 (PALA17_02393) | 2500902..2501597 | + | 696 | WP_003821135.1 | FadR/GntR family transcriptional regulator | - |
| PALA17_RS12075 (PALA17_02394) | 2501754..2502164 | - | 411 | WP_012614065.1 | hypothetical protein | - |
| PALA17_RS12080 (PALA17_02395) | 2502345..2503046 | + | 702 | WP_003821133.1 | DUF305 domain-containing protein | - |
| PALA17_RS12085 (PALA17_02396) | 2503057..2503314 | + | 258 | WP_003821132.1 | glutaredoxin family protein | - |
| PALA17_RS12090 (PALA17_02397) | 2503489..2504361 | + | 873 | WP_003821131.1 | 2-dehydro-3-deoxyphosphooctonate aldolase | VF |
| PALA17_RS12095 (PALA17_02398) | 2504412..2506283 | - | 1872 | WP_003821130.1 | MobH family relaxase | - |
| PALA17_RS12100 (PALA17_02399) | 2506600..2507226 | + | 627 | WP_003821129.1 | integrase | - |
| PALA17_RS12105 (PALA17_02400) | 2507239..2507871 | + | 633 | WP_012614066.1 | RES family NAD+ phosphorylase | - |
| PALA17_RS12110 (PALA17_02401) | 2507956..2508321 | + | 366 | WP_003821127.1 | DUF3742 family protein | - |
| PALA17_RS12115 (PALA17_02402) | 2508333..2509853 | - | 1521 | WP_003821126.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA17_RS12120 (PALA17_02403) | 2509869..2510240 | - | 372 | WP_003821125.1 | hypothetical protein | - |
| PALA17_RS12125 (PALA17_02404) | 2510237..2511634 | - | 1398 | WP_003821123.1 | integrating conjugative element protein | - |
| PALA17_RS12130 (PALA17_02405) | 2511644..2512591 | - | 948 | WP_012614067.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA17_RS12135 (PALA17_02406) | 2512588..2513034 | - | 447 | WP_003821119.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA17_RS12140 (PALA17_02407) | 2513197..2513691 | - | 495 | WP_003821118.1 | JAB domain-containing protein | - |
| PALA17_RS12145 (PALA17_02408) | 2513874..2514659 | - | 786 | WP_012614069.1 | thioredoxin domain-containing protein | - |
| PALA17_RS12150 (PALA17_02409) | 2514673..2517558 | - | 2886 | WP_012614070.1 | conjugative transfer ATPase | - |
| PALA17_RS12155 (PALA17_02410) | 2517558..2517998 | - | 441 | WP_003149753.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA17_RS12160 (PALA17_02411) | 2517979..2519397 | - | 1419 | WP_004350605.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA17_RS12165 (PALA17_02412) | 2519387..2520298 | - | 912 | WP_004350604.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA17_RS12170 (PALA17_02413) | 2520295..2520987 | - | 693 | WP_012614071.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA17_RS12175 (PALA17_02414) | 2520984..2521394 | - | 411 | WP_003821108.1 | TIGR03750 family conjugal transfer protein | - |
| PALA17_RS12180 (PALA17_02415) | 2521407..2521766 | - | 360 | WP_003153634.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA17_RS12185 (PALA17_02416) | 2521783..2522016 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA17_RS12190 (PALA17_02417) | 2522013..2522396 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA17_RS12195 (PALA17_02418) | 2522600..2523070 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA17_RS12200 (PALA17_02419) | 2523067..2523642 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA17_RS12205 (PALA17_02420) | 2523660..2524574 | + | 915 | WP_003050256.1 | AAA family ATPase | - |
| PALA17_RS12210 (PALA17_02421) | 2524571..2525041 | + | 471 | WP_003153638.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA17_RS12215 (PALA17_02422) | 2525038..2525538 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA17_RS12220 (PALA17_02423) | 2525538..2526440 | + | 903 | WP_003153640.1 | CBASS oligonucleotide cyclase | - |
| PALA17_RS12225 (PALA17_02424) | 2526479..2527204 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA17_RS12230 (PALA17_02425) | 2527214..2529838 | + | 2625 | WP_003153642.1 | AAA family ATPase | - |
| PALA17_RS12235 (PALA17_02426) | 2529879..2530628 | - | 750 | WP_003153644.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA17_RS12240 (PALA17_02427) | 2530625..2532814 | - | 2190 | WP_004350569.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA17_RS12245 (PALA17_02428) | 2532819..2533367 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| PALA17_RS12250 (PALA17_02429) | 2533364..2533954 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA17_RS12255 (PALA17_02430) | 2533936..2534673 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA17_RS12260 (PALA17_02431) | 2534686..2535330 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| PALA17_RS12265 (PALA17_02432) | 2535327..2535926 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| PALA17_RS12270 (PALA17_02433) | 2536065..2538344 | - | 2280 | WP_004350563.1 | helicase-related protein | - |
| PALA17_RS12275 (PALA17_02434) | 2538481..2538786 | - | 306 | WP_003116817.1 | hypothetical protein | - |
| PALA17_RS12280 (PALA17_02435) | 2538876..2539196 | - | 321 | WP_003116818.1 | hypothetical protein | - |
| PALA17_RS12285 (PALA17_02436) | 2539247..2540380 | - | 1134 | WP_223224654.1 | DUF6094 domain-containing protein | - |
| PALA17_RS12290 (PALA17_02437) | 2540421..2541068 | - | 648 | WP_003116820.1 | hypothetical protein | - |
| PALA17_RS12295 (PALA17_02438) | 2541145..2541405 | - | 261 | WP_003090124.1 | hypothetical protein | - |
| PALA17_RS12300 (PALA17_02439) | 2541422..2541829 | - | 408 | WP_003116821.1 | hypothetical protein | - |
| PALA17_RS12305 (PALA17_02440) | 2541934..2542275 | - | 342 | WP_003116822.1 | hypothetical protein | - |
| PALA17_RS12310 (PALA17_02441) | 2542370..2543059 | - | 690 | WP_003116823.1 | DUF3275 family protein | - |
| PALA17_RS12315 (PALA17_02442) | 2543154..2543981 | - | 828 | WP_003116824.1 | DUF932 domain-containing protein | - |
| PALA17_RS12320 (PALA17_02443) | 2544127..2545032 | - | 906 | WP_003116825.1 | DUF3577 domain-containing protein | - |
| PALA17_RS12325 | 2545343..2545627 | - | 285 | WP_003098923.1 | hypothetical protein | - |
| PALA17_RS12330 (PALA17_02445) | 2545935..2546219 | - | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| PALA17_RS12335 | 2546265..2547256 | - | 992 | Protein_2434 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PALA17_RS12340 (PALA17_02447) | 2547281..2548969 | - | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| PALA17_RS12345 (PALA17_02448) | 2548980..2549267 | - | 288 | WP_003116826.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA17_RS12350 (PALA17_02449) | 2549280..2549630 | - | 351 | WP_003116827.1 | mercuric ion transporter MerT | - |
| PALA17_RS12355 (PALA17_02450) | 2549702..2550109 | + | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| PALA17_RS12360 (PALA17_02452) | 2550371..2551195 | - | 825 | WP_003098941.1 | hypothetical protein | - |
| PALA17_RS12365 (PALA17_02453) | 2551484..2551762 | - | 279 | WP_003116828.1 | hypothetical protein | - |
| PALA17_RS12370 (PALA17_02454) | 2551860..2552597 | - | 738 | WP_003116829.1 | hypothetical protein | - |
| PALA17_RS12375 (PALA17_02455) | 2552681..2553367 | - | 687 | WP_003116830.1 | hypothetical protein | - |
| PALA17_RS12380 (PALA17_02456) | 2553550..2553942 | - | 393 | WP_003116832.1 | hypothetical protein | - |
| PALA17_RS12385 (PALA17_02457) | 2553964..2554176 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA17_RS12390 | 2554514..2554819 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA17_RS12395 (PALA17_02458) | 2555162..2555662 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA17_RS12400 (PALA17_02459) | 2555666..2558578 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA17_RS12405 (PALA17_02460) | 2558670..2559068 | + | 399 | WP_024082533.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA17_RS12410 | 2559523..2559726 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA17_RS12415 (PALA17_02461) | 2560144..2560779 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA17_RS12420 (PALA17_02462) | 2561503..2563533 | - | 2031 | WP_003116834.1 | DNA topoisomerase III | - |
| PALA17_RS12425 (PALA17_02463) | 2563817..2564257 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA17_RS12430 (PALA17_02464) | 2564331..2564858 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA17_RS12435 (PALA17_02465) | 2564855..2565646 | - | 792 | WP_003116836.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA17_RS12440 (PALA17_02466) | 2566076..2567314 | - | 1239 | WP_012614076.1 | STY4528 family pathogenicity island replication protein | - |
| PALA17_RS12445 (PALA17_02467) | 2567318..2567878 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA17_RS12450 (PALA17_02468) | 2567893..2569572 | - | 1680 | WP_004350508.1 | ParB family protein | - |
| PALA17_RS12455 (PALA17_02469) | 2569565..2569834 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA17_RS12460 (PALA17_02470) | 2569818..2570693 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA17_RS12465 (PALA17_02471) | 2570736..2570948 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA17_RS12470 (PALA17_02472) | 2571067..2571813 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA17_RS12475 (PALA17_02473) | 2572264..2572764 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA17_RS12480 | 2573426..2573679 | - | 254 | Protein_2463 | hypothetical protein | - |
| PALA17_RS12485 (PALA17_02474) | 2573825..2576802 | + | 2978 | Protein_2464 | transporter substrate-binding domain-containing protein | - |
| PALA17_RS12490 (PALA17_02475) | 2576893..2577426 | + | 534 | WP_004350037.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|