MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104958 bp
Accession: NZ_CP106744 Location: 2753974..2858931 Organism: Pseudomonas aeruginosa strain PALA16 Replicon: chromosome
Accession: NZ_CP106744 Location: 2753974..2858931 Organism: Pseudomonas aeruginosa strain PALA16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA16_RS12945 (PALA16_02584) | 2749290..2750438 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA16_RS12950 (PALA16_02585) | 2750780..2751424 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA16_RS12955 (PALA16_02586) | 2751425..2753251 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA16_RS12960 (PALA16_02587) | 2753285..2753845 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA16_RS12970 (PALA16_02589) | 2754218..2756149 | + | 1932 | WP_004350679.1 | hypothetical protein ; Integrase | Integrase |
| PALA16_RS12975 (PALA16_02590) | 2756349..2757005 | - | 657 | WP_003149848.1 | substrate-binding domain-containing protein | - |
| PALA16_RS12980 | 2757125..2757418 | + | 294 | WP_003149846.1 | helix-turn-helix transcriptional regulator | - |
| PALA16_RS12985 (PALA16_02591) | 2757440..2758330 | - | 891 | WP_004350675.1 | LysR substrate-binding domain-containing protein | - |
| PALA16_RS12990 (PALA16_02592) | 2758368..2758691 | - | 324 | WP_003149844.1 | hypothetical protein | - |
| PALA16_RS12995 (PALA16_02593) | 2758723..2760099 | - | 1377 | WP_004350672.1 | dihydrolipoyl dehydrogenase | - |
| PALA16_RS13000 (PALA16_02594) | 2760142..2760948 | - | 807 | WP_004350669.1 | sulfite exporter TauE/SafE family protein | - |
| PALA16_RS13005 (PALA16_02595) | 2761039..2761812 | - | 774 | WP_003149839.1 | thiol:disulfide interchange protein DsbG | - |
| PALA16_RS13010 (PALA16_02596) | 2761815..2762651 | - | 837 | WP_004350666.1 | TlpA disulfide reductase family protein | - |
| PALA16_RS13015 (PALA16_02597) | 2762651..2764504 | - | 1854 | WP_004350664.1 | protein-disulfide reductase DsbD | - |
| PALA16_RS13020 | 2764587..2765468 | - | 882 | WP_003149835.1 | c-type cytochrome biogenesis protein CcmI | - |
| PALA16_RS13025 (PALA16_02599) | 2765465..2765920 | - | 456 | WP_003149833.1 | cytochrome c-type biogenesis protein CcmH | - |
| PALA16_RS13030 (PALA16_02600) | 2765917..2766441 | - | 525 | WP_003149830.1 | DsbE family thiol:disulfide interchange protein | - |
| PALA16_RS13035 | 2766438..2768398 | - | 1961 | Protein_2573 | heme lyase CcmF/NrfE family subunit | - |
| PALA16_RS13040 (PALA16_02603) | 2768402..2768848 | - | 447 | WP_003149827.1 | Cytochrome c-type biogenesis protein CcmE | VF |
| PALA16_RS13045 (PALA16_02604) | 2768832..2769023 | - | 192 | WP_269972964.1 | heme exporter protein CcmD | - |
| PALA16_RS13050 (PALA16_02605) | 2769020..2769757 | - | 738 | WP_003149822.1 | Heme exporter protein C | VF |
| PALA16_RS13055 (PALA16_02606) | 2769770..2770456 | - | 687 | WP_003149819.1 | Heme exporter protein B | VF |
| PALA16_RS13060 | 2770458..2771075 | - | 618 | Protein_2578 | cytochrome c biogenesis heme-transporting ATPase CcmA | - |
| PALA16_RS13065 (PALA16_02607) | 2771244..2771912 | + | 669 | WP_269972965.1 | Transcriptional regulatory protein QseB | VF |
| PALA16_RS13070 (PALA16_02608) | 2771909..2772670 | + | 762 | WP_235583951.1 | sensor histidine kinase N-terminal domain-containing protein | - |
| PALA16_RS13075 | 2772633..2773295 | + | 663 | WP_235583954.1 | HAMP domain-containing sensor histidine kinase | - |
| PALA16_RS13080 (PALA16_02609) | 2773449..2774984 | - | 1536 | WP_023120491.1 | apolipoprotein N-acyltransferase | - |
| PALA16_RS13085 (PALA16_02610) | 2775072..2777201 | - | 2130 | WP_269972966.1 | cation-translocating P-type ATPase | - |
| PALA16_RS13090 (PALA16_02611) | 2777290..2778387 | - | 1098 | WP_004350647.1 | c-type cytochrome | - |
| PALA16_RS13095 (PALA16_02612) | 2778371..2779177 | - | 807 | WP_023120493.1 | hypothetical protein | VF |
| PALA16_RS13100 (PALA16_02613) | 2779186..2779827 | - | 642 | WP_003149800.1 | cbb3-type cytochrome c oxidase subunit II | - |
| PALA16_RS13105 (PALA16_02614) | 2779824..2781380 | - | 1557 | WP_003149798.1 | cbb3-type cytochrome c oxidase subunit I | - |
| PALA16_RS13110 (PALA16_02615) | 2781899..2783569 | - | 1671 | WP_004350643.1 | bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase | - |
| PALA16_RS13115 (PALA16_02616) | 2783618..2784496 | - | 879 | WP_003149790.1 | MBL fold metallo-hydrolase | - |
| PALA16_RS13120 (PALA16_02617) | 2784684..2785211 | - | 528 | WP_004350638.1 | rhodanese family protein | - |
| PALA16_RS13125 (PALA16_02618) | 2785234..2785545 | - | 312 | WP_003149789.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA16_RS13130 (PALA16_02619) | 2785695..2786921 | + | 1227 | WP_004350634.1 | MFS transporter | - |
| PALA16_RS13135 (PALA16_02620) | 2786998..2787375 | + | 378 | WP_004350630.1 | carboxymuconolactone decarboxylase family protein | - |
| PALA16_RS13140 (PALA16_02621) | 2787486..2787857 | + | 372 | WP_003149783.1 | DsrE family protein | - |
| PALA16_RS13145 (PALA16_02622) | 2787917..2788711 | - | 795 | WP_004350627.1 | crotonase/enoyl-CoA hydratase family protein | - |
| PALA16_RS13150 (PALA16_02623) | 2788976..2790118 | + | 1143 | WP_023120494.1 | AraC family transcriptional regulator | - |
| PALA16_RS13155 (PALA16_02624) | 2790166..2792058 | - | 1893 | WP_004350623.1 | MobH family relaxase | - |
| PALA16_RS13160 (PALA16_02625) | 2792374..2793000 | + | 627 | WP_003149774.1 | hypothetical protein | - |
| PALA16_RS13165 (PALA16_02626) | 2793013..2793645 | + | 633 | WP_003149772.1 | RES family NAD+ phosphorylase | - |
| PALA16_RS13170 (PALA16_02627) | 2793719..2794078 | + | 360 | WP_003149770.1 | DUF3742 family protein | - |
| PALA16_RS13175 | 2794094..2795641 | - | 1548 | Protein_2601 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA16_RS13180 (PALA16_02630) | 2795657..2796013 | - | 357 | WP_003149767.1 | hypothetical protein | - |
| PALA16_RS13185 (PALA16_02631) | 2796010..2797404 | - | 1395 | WP_003149765.1 | integrating conjugative element protein | - |
| PALA16_RS13190 (PALA16_02632) | 2797414..2798364 | - | 951 | WP_004350617.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA16_RS13195 (PALA16_02633) | 2798361..2798807 | - | 447 | WP_004350615.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA16_RS13200 (PALA16_02634) | 2798972..2799466 | - | 495 | WP_003149760.1 | DNA repair protein RadC | - |
| PALA16_RS13205 (PALA16_02635) | 2799642..2800406 | - | 765 | WP_034022494.1 | thioredoxin domain-containing protein | - |
| PALA16_RS13210 (PALA16_02636) | 2800420..2803314 | - | 2895 | WP_034022491.1 | conjugative transfer ATPase | - |
| PALA16_RS13215 (PALA16_02637) | 2803314..2803763 | - | 450 | WP_003116807.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA16_RS13220 (PALA16_02638) | 2803744..2805162 | - | 1419 | WP_003116808.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA16_RS13225 (PALA16_02639) | 2805152..2806063 | - | 912 | WP_034022488.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA16_RS13230 (PALA16_02640) | 2806060..2806752 | - | 693 | WP_004350603.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA16_RS13235 (PALA16_02641) | 2806749..2807147 | - | 399 | WP_003153632.1 | TIGR03750 family conjugal transfer protein | - |
| PALA16_RS13240 (PALA16_02642) | 2807160..2807519 | - | 360 | WP_003153634.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA16_RS13245 (PALA16_02643) | 2807536..2807769 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA16_RS13250 (PALA16_02644) | 2807766..2808149 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA16_RS13255 (PALA16_02645) | 2808353..2808823 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA16_RS13260 (PALA16_02646) | 2808820..2809395 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA16_RS13265 (PALA16_02647) | 2809413..2810327 | + | 915 | WP_003050256.1 | AAA family ATPase | - |
| PALA16_RS13270 (PALA16_02648) | 2810324..2810794 | + | 471 | WP_003153638.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA16_RS13275 (PALA16_02649) | 2810791..2811291 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA16_RS13280 (PALA16_02650) | 2811291..2812193 | + | 903 | WP_003153640.1 | CBASS oligonucleotide cyclase | - |
| PALA16_RS13285 (PALA16_02651) | 2812232..2812957 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA16_RS13290 (PALA16_02652) | 2812967..2815591 | + | 2625 | WP_003116812.1 | AAA family ATPase | - |
| PALA16_RS13295 (PALA16_02653) | 2815632..2816381 | - | 750 | WP_003109778.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA16_RS13300 (PALA16_02654) | 2816378..2818570 | - | 2193 | WP_003116813.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA16_RS13305 (PALA16_02655) | 2818575..2819123 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| PALA16_RS13310 (PALA16_02656) | 2819120..2819710 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA16_RS13315 (PALA16_02657) | 2819692..2820429 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA16_RS13320 (PALA16_02658) | 2820442..2821086 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| PALA16_RS13325 (PALA16_02659) | 2821083..2821682 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| PALA16_RS13330 (PALA16_02660) | 2821821..2824100 | - | 2280 | WP_004350563.1 | helicase-related protein | - |
| PALA16_RS13335 (PALA16_02661) | 2824238..2824543 | - | 306 | WP_269972967.1 | hypothetical protein | - |
| PALA16_RS13340 (PALA16_02662) | 2824632..2824952 | - | 321 | WP_016253276.1 | hypothetical protein | - |
| PALA16_RS13345 (PALA16_02663) | 2825004..2826113 | - | 1110 | WP_016253277.1 | DUF6094 domain-containing protein | - |
| PALA16_RS13350 (PALA16_02664) | 2826178..2826828 | - | 651 | WP_016253278.1 | hypothetical protein | - |
| PALA16_RS13355 (PALA16_02665) | 2826905..2827165 | - | 261 | WP_016253279.1 | hypothetical protein | - |
| PALA16_RS13360 (PALA16_02666) | 2827182..2827589 | - | 408 | WP_269972968.1 | hypothetical protein | - |
| PALA16_RS13365 (PALA16_02667) | 2827694..2828035 | - | 342 | WP_003116822.1 | hypothetical protein | - |
| PALA16_RS13370 (PALA16_02668) | 2828130..2828819 | - | 690 | WP_003116823.1 | DUF3275 family protein | - |
| PALA16_RS13375 (PALA16_02669) | 2828914..2829741 | - | 828 | WP_034022484.1 | DUF932 domain-containing protein | - |
| PALA16_RS13380 (PALA16_02670) | 2829887..2830792 | - | 906 | WP_034022481.1 | DUF3577 domain-containing protein | - |
| PALA16_RS13385 | 2831103..2831387 | - | 285 | WP_003098923.1 | hypothetical protein | - |
| PALA16_RS13390 (PALA16_02672) | 2831695..2831979 | - | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| PALA16_RS13395 | 2832025..2833016 | - | 992 | Protein_2645 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PALA16_RS13400 | 2833041..2834730 | - | 1690 | Protein_2646 | mercury(II) reductase | - |
| PALA16_RS13405 (PALA16_02675) | 2834741..2835028 | - | 288 | WP_003116826.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA16_RS13410 (PALA16_02676) | 2835041..2835391 | - | 351 | WP_011804695.1 | mercuric ion transporter MerT | - |
| PALA16_RS13415 (PALA16_02677) | 2835463..2835870 | + | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| PALA16_RS13420 (PALA16_02679) | 2836132..2836956 | - | 825 | WP_003098941.1 | hypothetical protein | - |
| PALA16_RS13425 (PALA16_02680) | 2837245..2837523 | - | 279 | WP_003116828.1 | hypothetical protein | - |
| PALA16_RS13430 (PALA16_02681) | 2837621..2838358 | - | 738 | WP_034022477.1 | hypothetical protein | - |
| PALA16_RS13435 (PALA16_02682) | 2838442..2839128 | - | 687 | WP_003116830.1 | hypothetical protein | - |
| PALA16_RS13440 (PALA16_02683) | 2839311..2839703 | - | 393 | WP_003116832.1 | hypothetical protein | - |
| PALA16_RS13445 (PALA16_02684) | 2839725..2839937 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA16_RS13450 (PALA16_02685) | 2840275..2840580 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA16_RS13455 (PALA16_02686) | 2840923..2841423 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA16_RS13460 (PALA16_02687) | 2841427..2844339 | - | 2913 | WP_172628423.1 | heavy metal translocating P-type ATPase | - |
| PALA16_RS13465 (PALA16_02688) | 2844431..2844829 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA16_RS13470 | 2845284..2845487 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA16_RS13475 (PALA16_02689) | 2845905..2846540 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA16_RS13480 | 2847283..2847417 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA16_RS13485 (PALA16_02690) | 2847357..2849294 | - | 1938 | Protein_2663 | DNA topoisomerase III | - |
| PALA16_RS13490 (PALA16_02691) | 2849578..2850018 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA16_RS13495 (PALA16_02692) | 2850092..2850619 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA16_RS13500 (PALA16_02693) | 2850616..2851407 | - | 792 | WP_003116836.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA16_RS13505 (PALA16_02694) | 2851837..2853075 | - | 1239 | WP_003116837.1 | STY4528 family pathogenicity island replication protein | - |
| PALA16_RS13510 (PALA16_02695) | 2853079..2853639 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA16_RS13515 (PALA16_02696) | 2853654..2855333 | - | 1680 | WP_004350508.1 | ParB family protein | - |
| PALA16_RS13520 (PALA16_02697) | 2855326..2855595 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA16_RS13525 (PALA16_02698) | 2855579..2856454 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA16_RS13530 (PALA16_02699) | 2856497..2856709 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA16_RS13535 (PALA16_02700) | 2856828..2857574 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA16_RS13540 (PALA16_02701) | 2858025..2858525 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA16_RS13545 | 2859258..2859424 | - | 167 | Protein_2675 | LysR family transcriptional regulator | - |
| PALA16_RS13550 (PALA16_02703) | 2859570..2862548 | + | 2979 | WP_016852816.1 | transporter substrate-binding domain-containing protein | - |
| PALA16_RS13555 (PALA16_02704) | 2862639..2863172 | + | 534 | WP_003099002.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|