MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121734 bp
Accession: NZ_CP106681 Location: 2774229..2895962 Organism: Pseudomonas aeruginosa strain PALA12 Replicon: chromosome
Accession: NZ_CP106681 Location: 2774229..2895962 Organism: Pseudomonas aeruginosa strain PALA12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA12_RS12560 (PALA12_02481) | 2769988..2770521 | - | 534 | WP_003099002.1 | ProQ/FINO family protein | - |
| PALA12_RS12565 (PALA12_02482) | 2770612..2773590 | - | 2979 | WP_016852816.1 | transporter substrate-binding domain-containing protein | - |
| PALA12_RS12570 | 2773736..2773902 | + | 167 | Protein_2486 | LysR family transcriptional regulator | - |
| PALA12_RS12575 (PALA12_02484) | 2774635..2775135 | - | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA12_RS12580 (PALA12_02485) | 2775586..2776332 | + | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA12_RS12585 (PALA12_02486) | 2776451..2776663 | + | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA12_RS12590 (PALA12_02487) | 2776706..2777581 | + | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA12_RS12595 (PALA12_02488) | 2777565..2777834 | + | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA12_RS12600 (PALA12_02489) | 2777827..2779506 | + | 1680 | WP_006226007.1 | ParB family protein | - |
| PALA12_RS12605 (PALA12_02490) | 2779521..2780081 | + | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA12_RS12610 (PALA12_02491) | 2780085..2781323 | + | 1239 | WP_006226008.1 | STY4528 family pathogenicity island replication protein | - |
| PALA12_RS12615 (PALA12_02492) | 2781753..2782544 | + | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA12_RS12620 (PALA12_02493) | 2782541..2783068 | + | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA12_RS12625 (PALA12_02494) | 2783142..2783582 | + | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA12_RS12630 (PALA12_02495) | 2783866..2785896 | + | 2031 | WP_003116834.1 | DNA topoisomerase III | - |
| PALA12_RS12635 (PALA12_02496) | 2786620..2787255 | - | 636 | WP_003098972.1 | cation transporter | - |
| PALA12_RS12640 | 2787673..2787876 | + | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA12_RS12645 (PALA12_02497) | 2788331..2788729 | - | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA12_RS12650 (PALA12_02498) | 2788821..2791733 | + | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA12_RS12655 (PALA12_02499) | 2791737..2792237 | + | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA12_RS12660 | 2792580..2792885 | + | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA12_RS12665 (PALA12_02500) | 2793223..2793435 | + | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA12_RS12670 (PALA12_02501) | 2793457..2793849 | + | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA12_RS12675 (PALA12_02502) | 2794063..2794800 | + | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA12_RS12680 (PALA12_02503) | 2794897..2795175 | + | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA12_RS12685 (PALA12_02504) | 2795463..2796275 | + | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA12_RS12690 (PALA12_02505) | 2796417..2796770 | + | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA12_RS12695 (PALA12_02506) | 2797137..2798066 | + | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA12_RS12700 (PALA12_02507) | 2798125..2798814 | + | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA12_RS12705 (PALA12_02508) | 2798909..2799235 | + | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA12_RS12710 (PALA12_02509) | 2799338..2799679 | + | 342 | WP_006226014.1 | hypothetical protein | - |
| PALA12_RS12715 (PALA12_02510) | 2799784..2800434 | + | 651 | WP_006226015.1 | hypothetical protein | - |
| PALA12_RS12720 (PALA12_02511) | 2800499..2801608 | + | 1110 | WP_006226016.1 | DUF6094 domain-containing protein | - |
| PALA12_RS12725 (PALA12_02512) | 2801659..2801979 | + | 321 | WP_003120017.1 | hypothetical protein | - |
| PALA12_RS12730 (PALA12_02513) | 2802069..2802376 | + | 308 | Protein_2518 | hypothetical protein | - |
| PALA12_RS12735 (PALA12_02514) | 2802513..2804792 | + | 2280 | WP_006226018.1 | helicase-related protein | - |
| PALA12_RS12740 (PALA12_02515) | 2804851..2805573 | - | 723 | WP_003120015.1 | arsenical resistance protein ArsH | - |
| PALA12_RS12745 (PALA12_02516) | 2805566..2805988 | - | 423 | WP_006217715.1 | arsenate reductase (glutaredoxin) | - |
| PALA12_RS12750 (PALA12_02517) | 2806005..2807081 | - | 1077 | WP_006226019.1 | ACR3 family arsenite efflux transporter | - |
| PALA12_RS12755 (PALA12_02518) | 2807093..2807587 | - | 495 | WP_006226020.1 | arsenate reductase ArsC | - |
| PALA12_RS12760 (PALA12_02519) | 2807590..2807910 | - | 321 | WP_003120011.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA12_RS12765 (PALA12_02520) | 2808079..2808657 | + | 579 | WP_006217720.1 | hypothetical protein | VF |
| PALA12_RS12770 (PALA12_02521) | 2808654..2809298 | + | 645 | WP_003120009.1 | hypothetical protein | - |
| PALA12_RS12775 (PALA12_02522) | 2809311..2810036 | + | 726 | WP_003120008.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA12_RS12780 (PALA12_02523) | 2810018..2810620 | + | 603 | WP_006226021.1 | transglycosylase SLT domain-containing protein | - |
| PALA12_RS12785 (PALA12_02524) | 2810617..2811165 | + | 549 | WP_006226022.1 | integrating conjugative element protein | - |
| PALA12_RS12790 (PALA12_02525) | 2811170..2813362 | + | 2193 | WP_006226023.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA12_RS12795 (PALA12_02526) | 2813359..2814108 | + | 750 | WP_006226024.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA12_RS12800 (PALA12_02527) | 2814149..2816773 | - | 2625 | WP_006226025.1 | AAA family ATPase | - |
| PALA12_RS12805 (PALA12_02528) | 2816783..2817508 | - | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA12_RS12810 (PALA12_02529) | 2817547..2818449 | - | 903 | WP_003090158.1 | CBASS oligonucleotide cyclase | - |
| PALA12_RS12815 (PALA12_02530) | 2818449..2818949 | - | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA12_RS12820 (PALA12_02531) | 2818946..2819416 | - | 471 | WP_003090160.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA12_RS12825 (PALA12_02532) | 2819413..2820327 | - | 915 | WP_016852809.1 | AAA family ATPase | - |
| PALA12_RS12830 (PALA12_02533) | 2820345..2820920 | - | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA12_RS12835 (PALA12_02534) | 2820917..2821387 | - | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA12_RS12840 (PALA12_02535) | 2821591..2821974 | + | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA12_RS12845 (PALA12_02536) | 2821971..2822204 | + | 234 | WP_006226027.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA12_RS12850 (PALA12_02537) | 2822221..2822580 | + | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA12_RS12855 (PALA12_02538) | 2822592..2822990 | + | 399 | WP_003050133.1 | TIGR03750 family conjugal transfer protein | - |
| PALA12_RS12860 (PALA12_02539) | 2822987..2823679 | + | 693 | WP_003090182.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA12_RS12865 (PALA12_02540) | 2823676..2824587 | + | 912 | WP_006226028.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA12_RS12870 (PALA12_02541) | 2824577..2825995 | + | 1419 | WP_006226029.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA12_RS12875 (PALA12_02542) | 2825976..2826431 | + | 456 | WP_003090198.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA12_RS12880 (PALA12_02543) | 2826431..2829322 | + | 2892 | WP_006226030.1 | conjugative transfer ATPase | - |
| PALA12_RS12885 (PALA12_02544) | 2829347..2830114 | + | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| PALA12_RS12890 (PALA12_02545) | 2830290..2830784 | + | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA12_RS12895 (PALA12_02546) | 2830949..2831395 | + | 447 | WP_006226031.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA12_RS12900 (PALA12_02547) | 2831392..2832342 | + | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA12_RS12905 (PALA12_02548) | 2832352..2833746 | + | 1395 | WP_006226032.1 | integrating conjugative element protein | - |
| PALA12_RS12910 (PALA12_02549) | 2833743..2834102 | + | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA12_RS12915 (PALA12_02550) | 2834116..2835636 | + | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA12_RS12920 (PALA12_02551) | 2835648..2836013 | - | 366 | WP_003090216.1 | DUF3742 family protein | - |
| PALA12_RS12925 (PALA12_02552) | 2836094..2836726 | - | 633 | WP_003121528.1 | RES family NAD+ phosphorylase | - |
| PALA12_RS12930 (PALA12_02553) | 2836739..2837365 | - | 627 | WP_003124463.1 | hypothetical protein | - |
| PALA12_RS12935 (PALA12_02554) | 2837679..2839493 | + | 1815 | WP_269974080.1 | MobH family relaxase | - |
| PALA12_RS12940 | 2839475..2839696 | - | 222 | WP_099459023.1 | MerR family DNA-binding transcriptional regulator | - |
| PALA12_RS12945 (PALA12_02555) | 2839915..2841210 | + | 1296 | WP_006226034.1 | ISL3 family transposase ISIde1 | Transposase |
| PALA12_RS12950 (PALA12_02556) | 2841247..2841711 | - | 465 | WP_010791737.1 | hypothetical protein | - |
| PALA12_RS12955 (PALA12_02557) | 2841759..2842184 | + | 426 | WP_006226036.1 | IS607 family transposase ISLhe9 | Transposase |
| PALA12_RS12960 (PALA12_02558) | 2842419..2842841 | - | 423 | WP_003090234.1 | MerR family DNA-binding protein | - |
| PALA12_RS12965 | 2842985..2843419 | + | 435 | WP_079279895.1 | hypothetical protein | - |
| PALA12_RS12970 (PALA12_02559) | 2843574..2843975 | + | 402 | WP_003090236.1 | hypothetical protein | - |
| PALA12_RS12975 (PALA12_02560) | 2843987..2844226 | + | 240 | WP_006226037.1 | DUF2933 domain-containing protein | - |
| PALA12_RS12980 (PALA12_02561) | 2844223..2844873 | + | 651 | WP_003090238.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA12_RS12985 (PALA12_02562) | 2844875..2845033 | + | 159 | WP_010791738.1 | hypothetical protein | - |
| PALA12_RS12990 (PALA12_02563) | 2845044..2845907 | + | 864 | WP_003090242.1 | polyphosphate kinase 2 | - |
| PALA12_RS12995 (PALA12_02564) | 2845940..2848405 | + | 2466 | WP_006226038.1 | heavy metal translocating P-type ATPase | - |
| PALA12_RS13000 (PALA12_02565) | 2848437..2849744 | + | 1308 | WP_006226039.1 | MFS transporter | - |
| PALA12_RS13005 (PALA12_02566) | 2849741..2850352 | + | 612 | WP_269974081.1 | LemA family protein | - |
| PALA12_RS13010 (PALA12_02567) | 2850354..2851259 | + | 906 | WP_023083479.1 | TPM domain-containing protein | - |
| PALA12_RS13015 (PALA12_02568) | 2851261..2851758 | + | 498 | WP_023083478.1 | TPM domain-containing protein | - |
| PALA12_RS13020 (PALA12_02569) | 2851784..2853145 | + | 1362 | WP_003090261.1 | MBL fold metallo-hydrolase | - |
| PALA12_RS13025 (PALA12_02570) | 2853142..2854695 | + | 1554 | WP_006226042.1 | thymidine phosphorylase family protein | - |
| PALA12_RS13030 (PALA12_02571) | 2854692..2855591 | + | 900 | WP_006226043.1 | ribose-phosphate pyrophosphokinase | - |
| PALA12_RS13035 (PALA12_02572) | 2855645..2856289 | + | 645 | WP_006226044.1 | hypothetical protein | - |
| PALA12_RS13040 (PALA12_02573) | 2856286..2856540 | + | 255 | WP_006226045.1 | hypothetical protein | - |
| PALA12_RS13045 (PALA12_02574) | 2856537..2857568 | + | 1032 | WP_006226046.1 | hydroxyacid dehydrogenase | - |
| PALA12_RS13050 (PALA12_02575) | 2857565..2859187 | + | 1623 | WP_023083477.1 | AarF/UbiB family protein | - |
| PALA12_RS13055 (PALA12_02576) | 2859215..2860270 | + | 1056 | WP_003090274.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA12_RS13060 (PALA12_02577) | 2860267..2861529 | + | 1263 | WP_003090275.1 | MgtC/SapB family protein | - |
| PALA12_RS13065 (PALA12_02578) | 2861538..2862368 | - | 831 | WP_003090276.1 | hypothetical protein | VF |
| PALA12_RS13070 (PALA12_02579) | 2862474..2863076 | + | 603 | WP_006226048.1 | hypothetical protein | VF |
| PALA12_RS13075 (PALA12_02580) | 2863254..2865683 | - | 2430 | WP_006226049.1 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase | - |
| PALA12_RS13080 (PALA12_02581) | 2865801..2867117 | - | 1317 | WP_006226050.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA12_RS13085 (PALA12_02582) | 2867272..2867724 | - | 453 | WP_016852803.1 | MerR family DNA-binding protein | - |
| PALA12_RS13090 (PALA12_02583) | 2867942..2869075 | - | 1134 | WP_006226052.1 | acetate/propionate family kinase | - |
| PALA12_RS13095 (PALA12_02584) | 2869371..2871038 | - | 1668 | WP_003090283.1 | DUF3141 domain-containing protein | - |
| PALA12_RS13100 (PALA12_02585) | 2871047..2871346 | - | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA12_RS13105 (PALA12_02586) | 2871365..2871691 | - | 327 | WP_003090285.1 | DUF2933 domain-containing protein | - |
| PALA12_RS13110 (PALA12_02587) | 2872326..2873762 | - | 1437 | WP_006226053.1 | Sensor histidine kinase CusS | VF |
| PALA12_RS13115 (PALA12_02588) | 2873734..2874426 | - | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA12_RS13120 (PALA12_02589) | 2874681..2876609 | + | 1929 | WP_023083476.1 | copper resistance system multicopper oxidase | - |
| PALA12_RS13125 (PALA12_02590) | 2876635..2877615 | + | 981 | WP_006226240.1 | copper resistance protein B | - |
| PALA12_RS13130 (PALA12_02591) | 2877653..2878138 | + | 486 | WP_006226241.1 | DUF411 domain-containing protein | - |
| PALA12_RS13135 (PALA12_02592) | 2878172..2878444 | + | 273 | WP_006226242.1 | DUF2933 domain-containing protein | - |
| PALA12_RS13140 (PALA12_02593) | 2878732..2881038 | + | 2307 | WP_134544982.1 | heavy metal translocating P-type ATPase | - |
| PALA12_RS13145 (PALA12_02594) | 2881180..2881566 | + | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA12_RS13150 (PALA12_02595) | 2881571..2882497 | + | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA12_RS13155 (PALA12_02596) | 2882626..2882910 | + | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA12_RS13160 (PALA12_02597) | 2883144..2884034 | + | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA12_RS13165 | 2884039..2884344 | - | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA12_RS13170 | 2884452..2885093 | + | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA12_RS13175 (PALA12_02599) | 2885380..2885691 | + | 312 | WP_006226245.1 | hypothetical protein | - |
| PALA12_RS13180 (PALA12_02600) | 2885767..2887074 | + | 1308 | WP_006226246.1 | TolC family protein | - |
| PALA12_RS13185 (PALA12_02601) | 2887090..2888607 | + | 1518 | WP_006226247.1 | hypothetical protein | VF |
| PALA12_RS13190 (PALA12_02602) | 2888604..2891723 | + | 3120 | WP_006226248.1 | efflux RND transporter permease subunit | - |
| PALA12_RS13195 (PALA12_02603) | 2891882..2892979 | + | 1098 | WP_006226249.1 | IS5 family transposase ISXoo14 | Transposase |
| PALA12_RS13200 | 2893158..2893491 | - | 334 | Protein_2612 | DUF2790 domain-containing protein | - |
| PALA12_RS13205 (PALA12_02604) | 2893785..2895719 | - | 1935 | WP_023083474.1 | hypothetical protein ; Integrase | Integrase |
| PALA12_RS13215 (PALA12_02606) | 2896091..2896651 | - | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA12_RS13220 (PALA12_02607) | 2896685..2898511 | - | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA12_RS13225 (PALA12_02608) | 2898512..2899146 | - | 635 | Protein_2616 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA12_RS13230 (PALA12_02609) | 2899488..2900636 | - | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|