MGE detailed information
MGE type: Genomic_island MGE length: 24555 bp
Accession: NZ_CP104920 Location: 2488007..2512561 Organism: Dickeya solani strain RNS 05.1.2A Replicon: chromosome
Accession: NZ_CP104920 Location: 2488007..2512561 Organism: Dickeya solani strain RNS 05.1.2A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS71_RS11130 | 2483100..2484491 | - | 1392 | WP_081020634.1 | MFS transporter | - |
| RS71_RS11135 | 2484706..2485482 | + | 777 | WP_057084306.1 | HNH endonuclease | - |
| RS71_RS11140 | 2485628..2486254 | + | 627 | WP_057084307.1 | LysE/ArgO family amino acid transporter | - |
| RS71_RS11145 | 2486340..2486966 | - | 627 | WP_022631942.1 | LysE family translocator | - |
| RS71_RS11150 | 2487038..2487994 | - | 957 | WP_038900142.1 | ornithine cyclodeaminase family protein | - |
| RS71_RS11155 | 2488007..2488552 | - | 546 | WP_226061843.1 | carboxymuconolactone decarboxylase family protein | - |
| RS71_RS11160 | 2488570..2489148 | - | 579 | WP_057084384.1 | bacilysin biosynthesis protein BacA | - |
| RS71_RS11165 | 2489177..2490139 | - | 963 | WP_038900140.1 | branched-chain amino acid transaminase | - |
| RS71_RS11170 | 2490139..2491545 | - | 1407 | WP_057084308.1 | AMP-binding protein | - |
| RS71_RS11175 | 2491678..2492100 | - | 423 | WP_013316126.1 | DUF2000 domain-containing protein | - |
| RS71_RS11180 | 2492280..2492477 | - | 198 | WP_226061844.1 | Dabb family protein | - |
| RS71_RS11185 | 2492641..2493123 | + | 483 | WP_057084309.1 | Lrp/AsnC family transcriptional regulator | - |
| RS71_RS11190 | 2493315..2494118 | - | 804 | WP_057084310.1 | hypothetical protein | - |
| RS71_RS11195 | 2494298..2495599 | - | 1302 | WP_057084311.1 | McrC family protein | - |
| RS71_RS11200 | 2495592..2497661 | - | 2070 | WP_057084312.1 | AAA family ATPase | - |
| RS71_RS11205 | 2498217..2498555 | + | 339 | WP_057084313.1 | hypothetical protein | - |
| RS71_RS11210 | 2499009..2499266 | + | 258 | WP_057084314.1 | YjhX family toxin | - |
| RS71_RS11215 | 2499277..2499996 | + | 720 | WP_081020630.1 | methyltransferase domain-containing protein | - |
| RS71_RS11220 | 2500233..2500520 | - | 288 | Protein_2173 | IS3 family transposase ISEhe3 | Transposase |
| RS71_RS11225 | 2500780..2501820 | - | 1041 | WP_057084315.1 | RhuM family protein | - |
| RS71_RS11230 | 2501877..2505125 | - | 3249 | WP_057084316.1 | DEAD/DEAH box helicase family protein | - |
| RS71_RS11235 | 2505122..2506495 | - | 1374 | WP_057084317.1 | restriction endonuclease subunit S | - |
| RS71_RS11240 | 2506495..2508858 | - | 2364 | WP_057084318.1 | class I SAM-dependent DNA methyltransferase | - |
| RS71_RS11245 | 2509186..2510437 | - | 1252 | Protein_2178 | Prophage integrase IntA ; Integrase | Integrase |
| RS71_RS11250 | 2510927..2511199 | + | 273 | WP_019843650.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| RS71_RS11255 | 2511190..2511669 | + | 480 | WP_013316117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| RS71_RS11260 | 2511698..2512099 | + | 402 | WP_057084319.1 | hypothetical protein | - |
| RS71_RS11265 | 2512244..2512540 | - | 297 | WP_057084320.1 | helix-turn-helix transcriptional regulator | - |
| RS71_RS11270 | 2512668..2512890 | + | 223 | Protein_2183 | helix-turn-helix domain-containing protein | - |
| RS71_RS11275 | 2512902..2513183 | - | 282 | WP_057084321.1 | Arm DNA-binding domain-containing protein | - |
| RS71_RS11285 | 2513791..2514861 | - | 1071 | WP_022631915.1 | LPS export ABC transporter permease LptG | - |
| RS71_RS11290 | 2514863..2515981 | - | 1119 | WP_022631914.1 | LPS export ABC transporter permease LptF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|