MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88844 bp
Accession: NZ_CP104870 Location: 4954563..5043406 Organism: Pseudomonas aeruginosa strain PALA9 Replicon: chromosome
Accession: NZ_CP104870 Location: 4954563..5043406 Organism: Pseudomonas aeruginosa strain PALA9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA9_RS23055 (PALA9_04563) | 4950051..4950662 | - | 612 | WP_004348355.1 | fimbrial protein | - |
| PALA9_RS23060 | 4951106..4951483 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| PALA9_RS23065 (PALA9_04565) | 4952068..4952706 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| PALA9_RS23070 (PALA9_04566) | 4953091..4953651 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| PALA9_RS23075 (PALA9_04567) | 4953772..4954176 | - | 405 | WP_003112559.1 | thioesterase family protein | - |
| PALA9_RS23085 (PALA9_04568) | 4954700..4955566 | + | 867 | WP_003111785.1 | ParA family protein | - |
| PALA9_RS23090 (PALA9_04569) | 4955568..4956305 | + | 738 | WP_023083208.1 | hypothetical protein | - |
| PALA9_RS23095 (PALA9_04570) | 4956302..4956799 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| PALA9_RS23100 (PALA9_04571) | 4956796..4957947 | + | 1152 | WP_023083209.1 | Lar family restriction alleviation protein | - |
| PALA9_RS23105 (PALA9_04572) | 4957947..4958648 | + | 702 | WP_023083210.1 | DUF2786 domain-containing protein | - |
| PALA9_RS23110 (PALA9_04573) | 4958645..4959352 | + | 708 | WP_023083211.1 | HNH endonuclease signature motif containing protein | - |
| PALA9_RS23115 (PALA9_04574) | 4959336..4959560 | + | 225 | WP_003134074.1 | hypothetical protein | - |
| PALA9_RS23120 (PALA9_04575) | 4959557..4960900 | + | 1344 | WP_023083212.1 | replicative DNA helicase | - |
| PALA9_RS23125 | 4961339..4961785 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| PALA9_RS23130 (PALA9_04577) | 4961963..4962148 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| PALA9_RS23135 (PALA9_04578) | 4962138..4962665 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| PALA9_RS23140 (PALA9_04579) | 4962662..4962919 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| PALA9_RS23145 (PALA9_04580) | 4962912..4963154 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| PALA9_RS23150 (PALA9_04581) | 4963147..4963380 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA9_RS23155 (PALA9_04582) | 4963380..4964396 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| PALA9_RS23160 (PALA9_04583) | 4964399..4964653 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| PALA9_RS23165 (PALA9_04584) | 4964650..4966386 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| PALA9_RS23170 (PALA9_04585) | 4966414..4967181 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| PALA9_RS23175 (PALA9_04586) | 4967178..4968449 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| PALA9_RS23180 | 4968446..4969243 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| PALA9_RS23185 (PALA9_04589) | 4969400..4970128 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA9_RS23190 (PALA9_04590) | 4970134..4970682 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| PALA9_RS23195 (PALA9_04591) | 4970729..4971568 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| PALA9_RS23200 (PALA9_04592) | 4971598..4972086 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| PALA9_RS23205 | 4972242..4972409 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| PALA9_RS23210 (PALA9_04593) | 4972475..4972693 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| PALA9_RS23215 (PALA9_04594) | 4972707..4972904 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| PALA9_RS23220 (PALA9_04595) | 4972920..4973330 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PALA9_RS23225 | 4973330..4973560 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PALA9_RS23230 (PALA9_04596) | 4973816..4975735 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| PALA9_RS23235 | 4976043..4976252 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PALA9_RS23240 (PALA9_04597) | 4976473..4978362 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| PALA9_RS23245 (PALA9_04598) | 4978359..4980332 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| PALA9_RS23250 (PALA9_04599) | 4980454..4981236 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| PALA9_RS23255 (PALA9_04600) | 4981269..4982522 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| PALA9_RS23260 (PALA9_04601) | 4982696..4983820 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| PALA9_RS23265 (PALA9_04602) | 4983820..4985529 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| PALA9_RS23270 (PALA9_04603) | 4985533..4986858 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| PALA9_RS23275 (PALA9_04604) | 4986848..4987381 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| PALA9_RS23280 (PALA9_04605) | 4987390..4988970 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| PALA9_RS23285 (PALA9_04606) | 4988970..4990049 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA9_RS23290 (PALA9_04607) | 4990071..4990601 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| PALA9_RS23295 (PALA9_04608) | 4990598..4991539 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| PALA9_RS23300 (PALA9_04609) | 4991544..4992872 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| PALA9_RS23305 (PALA9_04610) | 4992901..4993338 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| PALA9_RS23310 (PALA9_04611) | 4994260..4994649 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| PALA9_RS23315 (PALA9_04612) | 4994724..4994900 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| PALA9_RS23320 (PALA9_04613) | 4994902..4995036 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA9_RS23325 (PALA9_04614) | 4995361..4995840 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PALA9_RS23330 (PALA9_04615) | 4995978..4996136 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA9_RS23335 (PALA9_04616) | 4996210..4996407 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| PALA9_RS23340 (PALA9_04618) | 4996892..4997599 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| PALA9_RS23345 (PALA9_04619) | 4997835..4998185 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| PALA9_RS23350 (PALA9_04620) | 4998242..4998853 | + | 612 | Protein_4626 | DUF3275 family protein | - |
| PALA9_RS23355 (PALA9_04621) | 4999136..4999498 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PALA9_RS23360 (PALA9_04622) | 4999566..4999820 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PALA9_RS23365 (PALA9_04623) | 4999913..5000518 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| PALA9_RS23370 (PALA9_04624) | 5000548..5001993 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| PALA9_RS23375 (PALA9_04625) | 5002098..5004347 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| PALA9_RS23380 | 5004372..5004755 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| PALA9_RS23385 (PALA9_04626) | 5004961..5005254 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| PALA9_RS23390 (PALA9_04627) | 5005251..5006117 | + | 867 | WP_004352797.1 | IS3 family transposase ISAeca4 | Transposase |
| PALA9_RS23395 (PALA9_04628) | 5006377..5007069 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| PALA9_RS23400 (PALA9_04629) | 5007080..5007835 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA9_RS23405 (PALA9_04630) | 5007820..5008401 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| PALA9_RS23410 (PALA9_04631) | 5008398..5008898 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| PALA9_RS23415 (PALA9_04632) | 5008907..5009176 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PALA9_RS23420 (PALA9_04633) | 5009180..5011411 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA9_RS23425 (PALA9_04634) | 5011411..5012157 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA9_RS23430 | 5012175..5012666 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| PALA9_RS23435 (PALA9_04635) | 5012907..5014388 | + | 1482 | WP_023083224.1 | UvrD-helicase domain-containing protein | - |
| PALA9_RS23440 (PALA9_04636) | 5014520..5015629 | + | 1110 | WP_023083225.1 | hypothetical protein | - |
| PALA9_RS23445 | 5015674..5015940 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA9_RS23450 (PALA9_04637) | 5016158..5016457 | + | 300 | WP_023083774.1 | hypothetical protein | - |
| PALA9_RS23455 (PALA9_04638) | 5016550..5016888 | + | 339 | WP_023083775.1 | RAQPRD family integrative conjugative element protein | - |
| PALA9_RS23460 | 5016885..5017124 | + | 240 | WP_003123360.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA9_RS23465 (PALA9_04640) | 5017142..5017498 | + | 357 | WP_023083777.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA9_RS23470 (PALA9_04641) | 5017509..5017895 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| PALA9_RS23475 (PALA9_04642) | 5017892..5018551 | + | 660 | WP_023083778.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA9_RS23480 (PALA9_04643) | 5018548..5019432 | + | 885 | WP_023083779.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA9_RS23485 (PALA9_04644) | 5019416..5020921 | + | 1506 | WP_023083780.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA9_RS23490 (PALA9_04645) | 5020899..5021342 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA9_RS23495 (PALA9_04646) | 5021342..5024284 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| PALA9_RS23500 (PALA9_04647) | 5024281..5024565 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| PALA9_RS23505 (PALA9_04648) | 5024562..5025221 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| PALA9_RS23510 (PALA9_04649) | 5025218..5025436 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| PALA9_RS23515 (PALA9_04651) | 5027577..5028008 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA9_RS23520 (PALA9_04652) | 5028008..5028946 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA9_RS23525 (PALA9_04653) | 5028964..5030346 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| PALA9_RS23530 (PALA9_04654) | 5030346..5030693 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| PALA9_RS23535 (PALA9_04655) | 5030690..5032204 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA9_RS23540 (PALA9_04656) | 5032261..5032599 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| PALA9_RS23545 (PALA9_04657) | 5032718..5032990 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA9_RS23550 (PALA9_04658) | 5032994..5033344 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA9_RS23555 (PALA9_04659) | 5033755..5036214 | - | 2460 | WP_124180053.1 | hypothetical protein | - |
| PALA9_RS23560 (PALA9_04660) | 5036502..5038229 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| PALA9_RS23565 (PALA9_04661) | 5038240..5039253 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| PALA9_RS23570 (PALA9_04662) | 5039795..5041714 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| PALA9_RS23575 (PALA9_04663) | 5041711..5042991 | + | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA9_RS23585 (PALA9_04665) | 5043497..5044171 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PALA9_RS23590 (PALA9_04666) | 5044187..5044834 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PALA9_RS23595 (PALA9_04667) | 5045054..5045878 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PALA9_RS23600 (PALA9_04668) | 5045888..5046394 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PALA9_RS23605 (PALA9_04669) | 5046447..5047745 | - | 1299 | WP_003086128.1 | Tol-Pal system beta propeller repeat protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|